Personal tools

FFCP PHASE1:Mm9::chr2:92886419..92886455,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=100042784|HGNC=|UniProt=A2AGX4|association_with_transcript=-95bp_to_ENSMUST00000147339_5end|description=CAGE_peak_2_at_Prdm11_5end|id=chr2:92886419..92886455,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.79e-11!71;UBERON:0003075!4.79e-11!71;UBERON:0007284!4.79e-11!71;UBERON:0000153!8.53e-09!94;UBERON:0007811!1.03e-08!86;UBERON:0000033!1.59e-08!63;UBERON:0002616!4.12e-08!49;UBERON:0001049!4.52e-08!52;UBERON:0005068!4.52e-08!52;UBERON:0006241!4.52e-08!52;UBERON:0007135!4.52e-08!52;UBERON:0000955!6.98e-08!50;UBERON:0006238!6.98e-08!50;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0003056!3.72e-07!49;UBERON:0001017!5.08e-07!73;UBERON:0005743!5.08e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.33e-12,92;UBERON:0000073,2.02e-08,54;UBERON:0002346,3.83e-08,64;UBERON:0003075,3.83e-08,64;UBERON:0007284,3.83e-08,64;UBERON:0010371,1.47e-07,73;UBERON:0001049,3.88e-07,52;UBERON:0005068,3.88e-07,52;UBERON:0006241,3.88e-07,52;UBERON:0007135,3.88e-07,52|phase1_expression=1.60148847104794,0,0.454999239389536,0,0,0.33575854382378,0,0.258246646883153,0.563154888606667,0.468129052643987,0,0.398860794976682,1.19840510951844,0.34968160967599,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,1.27564935226605,0.496454756004426,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,1.09012578190223,0.219686182734472,0.194429899074283,0.419959264876088,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0,0.202316460859598,0.528990979272033,1.26766280701236,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0.768436610643109,2.17748185847803,1.89008313664367,0.841299845405528,2.28520787523043,1.54607978666129,1.34739879136449,1.82106394934649,0.919218786610021,5.50579404996943,4.08599481872601,3.37934373163736,0.791317726381163,0.731901148819277,2.08365348222704,1.95428099300967,2.8138130501584,2.13917546887534,1.47314292736834,2.13557521198654,1.4911955666024,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.259786004602869,0.70667914902068,3.66192891419369,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.258937883647172,2.3750742250372,1.90833859442749,2.13125834818499,1.61430848079241,1.95939432718409,1.76383060703557,1.38233250462643,0,0.722996784599558,0,0.970601099684455,1.10420759230197,0.484875253135222,0,1.17112318804619,3.56059401582874,0,0.359445373517761,0.599902730993408,0.254140454146129,2.39665023047716,0.457500602818626,0.879580464790051,2.08589184230732,2.04572365864264,2.70124457927428,2.75810147215188,2.54598409625791,0.870848794270651,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.62055916824814,2.41127708537144,1.42876648217788,2.17793324484245,1.03071897015702,1.29351685369508,0.431135985865684,0.378212160335639,1.23165786914764,1.31517439456545,2.22437799380478,2.089512999133,1.23469281844766,2.18937693500343,0,0,0,0.828503090142008,0.234526059981096,1.62055855314913,1.18372367792605,2.75469924446365,1.54267112887378,2.09280550275367,2.14618721119695,1.86824547787471,2.96207729844265,2.13417703302824,1.70244500046297,1.60819986167866,1.53685080703735,0.536825675041487,2.94405927989778,1.02904612379284,0,0,0.853153002140936,0.928946687441754,1.15980715189884,0.80673409849337,1.77902435075896,1.33157938278791,0,1.15289268306808,0.754005626400808,1.1937388322469,0,0,0.432276099749388,0.199141273254367,0.758671603812327,2.28497025219458,0,1.01825663922657,1.16371492300575,1.54298803758701,1.13825766823663,0.442830443938806,0.31399745568275,0.987177311374404,0,1.16791574001266,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,2.4633883530163,0.814824882210129,1.18821560042632,1.87752198630802,1.84256883185997,3.33261097240419,6.82967767502296,1.7339865851681,1.7717175171902,2.71073106717728,0.983179888294428,1.38147985492716,1.3018415272336,0,0,0,0.551873492609465,1.28440471990234,2.22702204525186,0,0,1.26203287766503,2.34263246577983,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,0.709700426041343,2.67098405500883,3.4206261464251,1.31976098378028,0,1.45668381692989,2.11626489875326,0.377210159511796,0.885905678642318,1.84461088766356,1.03371317267288,2.18120237686503,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.720244376125241,1.03486947026204,2.14337035031592,1.95074257006501,1.07021290561242,1.31639216481697,1.2178597964584,0.23467170806371,0.42366414172764,0,0.65954501176592,2.74489525383039,1.14594557363496,0.596861720015682,0.328281799490123,0.291480836629851,2.03967832211561,0.170870880797853,2.88941615148511,2.22233432843654,0,0.683471138605126,0,0.169978429993855,0.69975726161829,0.414599921413271,0,1.73984796469624,1.21991680276109,2.16010681643603,2.71814784818809,1.74690050996942,1.34864346384821,1.40510874733071,0.26175594198403,0.388844919875379,0,3.94585057078933,1.49516546043979,2.48187735685646,4.4723773319131,2.97067593998782,2.19642963138012,2.69921648885234,2.47388331203505,1.36317147753424,1.69108884578204,1.44015003128933,0.948033361884535,1.82452693761148,1.43795340030758,1.42912905275575,1.25318686967237,1.39076948346885,2.04332264183947,1.18151621739662,1.41353029927407,2.59103142626999,2.52065462842101,1.65678397257579,1.15454209968395,1.75315353272353,0.453460767230423,0,0.0897138566094757,0,0.579568782096571,0.750729901804728,0.73260649706906,0.214368379079066,0,3.95326289831947,3.22227665555024,4.01026859407578,3.60891682921744,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,0.906284817968409,2.5888015587591,1.03787347584177,0.399024873401031,0.512200817262403,1.45864030240976,1.67690530102386,0.919217542250071,0.888986911206461,0.824140228955577,0.962757628775446,1.76888048234658,1.01391719956096,0.754505365544305,1.12369808963859,1.72867911493147,1.09127391015665,2.38146845641537,1.39061191133827,1.54327376370964,2.88460130562315,2.06078488188156,0.342869252385415,1.4198064492747,0.953744759789284,1.0174249164263,1.41164070622996,1.60767754994185,1.82927972872773,1.8414879800649,0.679020569229309,1.12228454331548,1.54225523561426,1.37906275325789,2.04615521584845,1.85924209423159,1.73615949883027,3.2475375131933,1.87145286756327,1.07435527024149,0.956441660344217,0.882365676478062,0.231867835620421|short_description=p2@Prdm11}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100042784
|HGNC=
|TSSclassifier=NA
|UniProt=A2AGX4
|association_with_transcript=-95bp_to_ENSMUST00000147339_5end
|cluster_id=chr2:92886419..92886455,-
|description=CAGE_peak_2_at_Prdm11_5end
|id=chr2:92886419..92886455,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.79e-11!71;UBERON:0003075!4.79e-11!71;UBERON:0007284!4.79e-11!71;UBERON:0000153!8.53e-09!94;UBERON:0007811!1.03e-08!86;UBERON:0000033!1.59e-08!63;UBERON:0002616!4.12e-08!49;UBERON:0001049!4.52e-08!52;UBERON:0005068!4.52e-08!52;UBERON:0006241!4.52e-08!52;UBERON:0007135!4.52e-08!52;UBERON:0000955!6.98e-08!50;UBERON:0006238!6.98e-08!50;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0003056!3.72e-07!49;UBERON:0001017!5.08e-07!73;UBERON:0005743!5.08e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.33e-12,92;UBERON:0000073,2.02e-08,54;UBERON:0002346,3.83e-08,64;UBERON:0003075,3.83e-08,64;UBERON:0007284,3.83e-08,64;UBERON:0010371,1.47e-07,73;UBERON:0001049,3.88e-07,52;UBERON:0005068,3.88e-07,52;UBERON:0006241,3.88e-07,52;UBERON:0007135,3.88e-07,52
|phase1_expression=1.60148847104794,0,0.454999239389536,0,0,0.33575854382378,0,0.258246646883153,0.563154888606667,0.468129052643987,0,0.398860794976682,1.19840510951844,0.34968160967599,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,1.27564935226605,0.496454756004426,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,1.09012578190223,0.219686182734472,0.194429899074283,0.419959264876088,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0,0.202316460859598,0.528990979272033,1.26766280701236,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0.768436610643109,2.17748185847803,1.89008313664367,0.841299845405528,2.28520787523043,1.54607978666129,1.34739879136449,1.82106394934649,0.919218786610021,5.50579404996943,4.08599481872601,3.37934373163736,0.791317726381163,0.731901148819277,2.08365348222704,1.95428099300967,2.8138130501584,2.13917546887534,1.47314292736834,2.13557521198654,1.4911955666024,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.259786004602869,0.70667914902068,3.66192891419369,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.258937883647172,2.3750742250372,1.90833859442749,2.13125834818499,1.61430848079241,1.95939432718409,1.76383060703557,1.38233250462643,0,0.722996784599558,0,0.970601099684455,1.10420759230197,0.484875253135222,0,1.17112318804619,3.56059401582874,0,0.359445373517761,0.599902730993408,0.254140454146129,2.39665023047716,0.457500602818626,0.879580464790051,2.08589184230732,2.04572365864264,2.70124457927428,2.75810147215188,2.54598409625791,0.870848794270651,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.62055916824814,2.41127708537144,1.42876648217788,2.17793324484245,1.03071897015702,1.29351685369508,0.431135985865684,0.378212160335639,1.23165786914764,1.31517439456545,2.22437799380478,2.089512999133,1.23469281844766,2.18937693500343,0,0,0,0.828503090142008,0.234526059981096,1.62055855314913,1.18372367792605,2.75469924446365,1.54267112887378,2.09280550275367,2.14618721119695,1.86824547787471,2.96207729844265,2.13417703302824,1.70244500046297,1.60819986167866,1.53685080703735,0.536825675041487,2.94405927989778,1.02904612379284,0,0,0.853153002140936,0.928946687441754,1.15980715189884,0.80673409849337,1.77902435075896,1.33157938278791,0,1.15289268306808,0.754005626400808,1.1937388322469,0,0,0.432276099749388,0.199141273254367,0.758671603812327,2.28497025219458,0,1.01825663922657,1.16371492300575,1.54298803758701,1.13825766823663,0.442830443938806,0.31399745568275,0.987177311374404,0,1.16791574001266,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,2.4633883530163,0.814824882210129,1.18821560042632,1.87752198630802,1.84256883185997,3.33261097240419,6.82967767502296,1.7339865851681,1.7717175171902,2.71073106717728,0.983179888294428,1.38147985492716,1.3018415272336,0,0,0,0.551873492609465,1.28440471990234,2.22702204525186,0,0,1.26203287766503,2.34263246577983,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,0.709700426041343,2.67098405500883,3.4206261464251,1.31976098378028,0,1.45668381692989,2.11626489875326,0.377210159511796,0.885905678642318,1.84461088766356,1.03371317267288,2.18120237686503,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.720244376125241,1.03486947026204,2.14337035031592,1.95074257006501,1.07021290561242,1.31639216481697,1.2178597964584,0.23467170806371,0.42366414172764,0,0.65954501176592,2.74489525383039,1.14594557363496,0.596861720015682,0.328281799490123,0.291480836629851,2.03967832211561,0.170870880797853,2.88941615148511,2.22233432843654,0,0.683471138605126,0,0.169978429993855,0.69975726161829,0.414599921413271,0,1.73984796469624,1.21991680276109,2.16010681643603,2.71814784818809,1.74690050996942,1.34864346384821,1.40510874733071,0.26175594198403,0.388844919875379,0,3.94585057078933,1.49516546043979,2.48187735685646,4.4723773319131,2.97067593998782,2.19642963138012,2.69921648885234,2.47388331203505,1.36317147753424,1.69108884578204,1.44015003128933,0.948033361884535,1.82452693761148,1.43795340030758,1.42912905275575,1.25318686967237,1.39076948346885,2.04332264183947,1.18151621739662,1.41353029927407,2.59103142626999,2.52065462842101,1.65678397257579,1.15454209968395,1.75315353272353,0.453460767230423,0,0.0897138566094757,0,0.579568782096571,0.750729901804728,0.73260649706906,0.214368379079066,0,3.95326289831947,3.22227665555024,4.01026859407578,3.60891682921744,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,0.906284817968409,2.5888015587591,1.03787347584177,0.399024873401031,0.512200817262403,1.45864030240976,1.67690530102386,0.919217542250071,0.888986911206461,0.824140228955577,0.962757628775446,1.76888048234658,1.01391719956096,0.754505365544305,1.12369808963859,1.72867911493147,1.09127391015665,2.38146845641537,1.39061191133827,1.54327376370964,2.88460130562315,2.06078488188156,0.342869252385415,1.4198064492747,0.953744759789284,1.0174249164263,1.41164070622996,1.60767754994185,1.82927972872773,1.8414879800649,0.679020569229309,1.12228454331548,1.54225523561426,1.37906275325789,2.04615521584845,1.85924209423159,1.73615949883027,3.2475375131933,1.87145286756327,1.07435527024149,0.956441660344217,0.882365676478062,0.231867835620421
|short_description=p2@Prdm11
}}

Latest revision as of 03:31, 27 September 2015

Short description:p2@Prdm11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prdm11_5end
Coexpression cluster:NA
Association with transcript: -95bp_to_ENSMUST00000147339_5end
EntrezGene:Prdm11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prdm11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest8.33e-1292
regional part of nervous system2.02e-0854
neurectoderm3.83e-0864
neural plate3.83e-0864
presumptive neural plate3.83e-0864
ecto-epithelium1.47e-0773
neural tube3.88e-0752
neural rod3.88e-0752
future spinal cord3.88e-0752
neural keel3.88e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:92886419..92886455,-&oldid=4290436"