FFCP PHASE1:Mm9::chr6:38204274..38204327,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:38204274..38204327,-
|short_description=p3@D630045J12Rik
|description=CAGE_peak_3_at_D630045J12Rik_5end
|association_with_transcript=-265bp_to_ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=330286 | |EntrezGene=330286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7W4,Q68FD9 | |UniProt=E9Q7W4,Q68FD9 | ||
|association_with_transcript=-265bp_to_ENSMUST00000169256,NM_194061,uc009bjt.2_5end | |||
|cluster_id=chr6:38204274..38204327,- | |||
|description=CAGE_peak_3_at_D630045J12Rik_5end | |||
|id=chr6:38204274..38204327,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!2.73e-12!33;CL:0000047!2.73e-12!33;CL:0000031!2.73e-12!33;CL:0000404!2.73e-12!33;CL:0000221!2.67e-10!44;CL:0000133!2.67e-10!44;CL:0002319!5.18e-10!43;CL:0000393!9.90e-10!39;CL:0000211!9.90e-10!39;CL:0000055!1.24e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.87e-14,23;CL:0000337,3.87e-14,23;CL:0000540,8.37e-13,33;CL:0000047,8.37e-13,33;CL:0000031,8.37e-13,33;CL:0000404,8.37e-13,33;CL:0000221,1.68e-09,44;CL:0000133,1.68e-09,44;CL:0000393,3.06e-09,39;CL:0000211,3.06e-09,39;CL:0002319,3.44e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.87e-21!73;UBERON:0005743!1.87e-21!73;UBERON:0000073!1.52e-20!75;UBERON:0001016!1.52e-20!75;UBERON:0004121!2.01e-19!102;UBERON:0000924!2.01e-19!102;UBERON:0006601!2.01e-19!102;UBERON:0001049!9.51e-18!52;UBERON:0005068!9.51e-18!52;UBERON:0006241!9.51e-18!52;UBERON:0007135!9.51e-18!52;UBERON:0002020!4.29e-17!34;UBERON:0000033!9.23e-17!63;UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0000955!3.35e-16!50;UBERON:0006238!3.35e-16!50;UBERON:0002616!1.33e-15!49;UBERON:0003056!2.23e-15!49;UBERON:0003080!6.49e-15!40;UBERON:0002780!1.35e-14!39;UBERON:0001890!1.35e-14!39;UBERON:0006240!1.35e-14!39;UBERON:0002791!2.32e-14!29;UBERON:0003528!2.32e-14!29;UBERON:0001893!2.32e-14!29;UBERON:0000956!1.36e-10!21;UBERON:0001869!1.36e-10!21;UBERON:0000203!1.36e-10!21;UBERON:0000153!1.07e-08!94;UBERON:0002619!5.30e-08!17;UBERON:0007811!2.00e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.36e-22,73;UBERON:0001016,1.26e-20,75;UBERON:0004121,1.56e-20,95;UBERON:0000924,1.56e-20,95;UBERON:0006601,1.56e-20,95;UBERON:0000073,9.06e-20,54;UBERON:0002346,3.69e-19,64;UBERON:0003075,3.69e-19,64;UBERON:0007284,3.69e-19,64;UBERON:0010371,3.91e-19,73;UBERON:0001049,4.22e-19,52;UBERON:0005068,4.22e-19,52;UBERON:0006241,4.22e-19,52;UBERON:0007135,4.22e-19,52;UBERON:0002020,1.36e-18,34;UBERON:0000955,1.51e-16,47;UBERON:0006238,1.51e-16,47;UBERON:0003080,4.70e-16,40;UBERON:0003056,4.90e-16,49;UBERON:0002616,7.02e-16,46;UBERON:0002780,1.08e-15,39;UBERON:0001890,1.08e-15,39;UBERON:0006240,1.08e-15,39;UBERON:0003528,1.69e-15,29;UBERON:0002791,1.69e-15,29;UBERON:0001893,1.69e-15,29;UBERON:0000956,3.20e-11,21;UBERON:0001869,3.20e-11,21;UBERON:0000203,3.20e-11,21;UBERON:0010314,7.54e-09,92;UBERON:0002619,2.58e-08,17 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.61582251287033,0.794327609607082,1.30599894569468,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.917733760808408,2.34717403304412,0.436050312760893,0.659058548203415,0.388859798148567,1.1198913730029,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,7.48570905180512,6.87688273053643,6.97214543856797,1.69422266034566,0,0.449949858640699,0,0,1.79760066311043,0.768436610643109,19.3899575016853,19.7108669964268,13.0401476037857,5.71301968807607,3.3130281142742,17.3936934885235,15.814502718009,21.1420320920305,1.10115880999389,4.08599481872601,2.91852413186863,7.64940468835124,8.59983849862651,4.68822033501084,2.51264699101243,2.8138130501584,1.68078072554491,5.00868595305235,4.41352210477219,6.33758115806022,0.454357159999104,0.453429360640713,0,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,1.02258193546835,0.259786004602869,0,2.53518155598025,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,1.38788261412909,0.304465478312141,1.15307748628029,0.60289056221049,1.05829836422134,0.125666591329675,0.494389935468748,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,1.17112318804619,2.51336048176146,0.255457055208591,0.479260498023681,0,0.127070227073065,2.69623150928681,8.6925114535539,21.8638572676384,7.47444576826789,9.2057564638919,3.74018480207208,4.2182728397617,1.62942982160506,1.36847667671102,5.05445516867349,0.420883711772948,1.69156575851515,1.60931473103431,2.52086981727489,2.71268672104287,2.65342346690179,1.40925092313335,2.34254311399322,0.776110112217047,6.46703978798527,5.67318240503458,2.81521798662318,2.84954452155847,3.05851974148158,1.0447564995665,1.4404749548556,1.79130840136644,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,0.590292695242212,0,0.930135779001631,0.536546802799238,0.116765342367169,0.822799249567402,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,8.41159794256509,11.216602749342,0,0,1.49301775374664,1.16118335930219,2.06187938115349,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0,2.46568271239006,2.28497025219458,1.1270773567308,3.05476991767971,3.49114476901726,2.03393877681924,1.64414996523069,1.03327103585722,1.41298855057237,1.1105744752962,0,0.667380422864376,1.37591296579242,0.224862112384854,0,0.72353147925725,0,0.287696137450811,0.324270453550071,0,0,1.48856379067401,0.624075346229121,0.505157755894224,0.179397413521912,0.482443521363367,1.47802552133284,1.32643988239339,1.30371981153621,2.54617628662782,1.40814148973101,0.670025029767263,0,1.36593553500459,1.10344600874334,1.32878813789265,1.11618338060241,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0.275936746304732,1.28440471990234,1.99259867206745,0.327869890753351,0.252470927204373,1.89304931649754,0.780877488593277,2.58508077279359,1.19484398976276,0.891194696329576,2.83076530788832,1.61924280669958,2.04579100537918,1.58115111178609,6.74774764485795,0.99358059645788,3.73937767701236,2.93196526836437,4.45419332025846,0,1.94224508923985,1.209294227859,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,1.09060118843252,0.712994756769443,0,0,0,0.340439605753788,1.98067203434441,1.94038025674132,2.14337035031592,1.06404140185364,1.24858172321449,1.81003922662333,1.2178597964584,2.3467170806371,1.48282449604674,2.8668691747145,2.4732937941222,1.61464426695906,1.5078231232039,1.67121281604391,2.1338316966858,0,1.8542530201051,0,0.619160603889667,0.370389054739423,0.188368457004691,0,0.457556346413045,0.339956859987711,0.279902904647316,1.38199973804424,0,3.47969592939249,2.23651413839534,0.972048067396211,1.04544148007234,0.218362563746178,0.809186078308924,0.826534557253359,0.26175594198403,0,0.621339313086926,1.12738587736838,2.24274819065968,1.15820943319968,0.777804753376191,0.904118764344118,2.02747350588934,1.05621514781179,4.1665403150064,4.29923312145414,0.724752362478018,0.288030006257865,0.316011120628178,0.810900861160657,1.02710957164827,0.51968329191118,0.358053391334963,0.79472541912506,0.240390899039938,0.738447635872886,0.302899349844443,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.467507608726276,1.36038230169127,1.55390167361845,4.57540668708326,3.18980771091749,1.15913756419314,0.750729901804728,0.36630324853453,3.85863082342319,2.50786052017682,3.95326289831947,4.60325236507177,5.72895513439397,4.1244763762485,3.42541259885321,2.2661816921691,4.05013500139084,5.85417564191487,6.34399372577886,4.14208249401456,1.3492355185943,7.58147259461959,1.53660245178721,1.70174701947806,1.25767897576789,2.02227859295016,1.55572709461131,1.44224540067226,1.28367683836726,3.03236654116557,2.78827229879264,2.82939512079114,2.24739617927718,3.45735822986294,3.15895079255873,2.85776214769844,3.012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| ||
|short_description=p3@D630045J12Rik | |||
}} | }} |
Latest revision as of 03:18, 27 September 2015
Short description: | p3@D630045J12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_D630045J12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -265bp_to_ENSMUST00000169256, NM_194061, uc009bjt.2_5end |
EntrezGene: | D630045J12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.87e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.87e-14 | 23 |
neuron | 8.37e-13 | 33 |
neuronal stem cell | 8.37e-13 | 33 |
neuroblast | 8.37e-13 | 33 |
electrically signaling cell | 8.37e-13 | 33 |
ectodermal cell | 1.68e-09 | 44 |
neurectodermal cell | 1.68e-09 | 44 |
electrically responsive cell | 3.06e-09 | 39 |
electrically active cell | 3.06e-09 | 39 |
neural cell | 3.44e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.36e-22 | 73 |
nervous system | 1.26e-20 | 75 |
ectoderm-derived structure | 1.56e-20 | 95 |
ectoderm | 1.56e-20 | 95 |
presumptive ectoderm | 1.56e-20 | 95 |
regional part of nervous system | 9.06e-20 | 54 |
neurectoderm | 3.69e-19 | 64 |
neural plate | 3.69e-19 | 64 |
presumptive neural plate | 3.69e-19 | 64 |
ecto-epithelium | 3.91e-19 | 73 |
neural tube | 4.22e-19 | 52 |
neural rod | 4.22e-19 | 52 |
future spinal cord | 4.22e-19 | 52 |
neural keel | 4.22e-19 | 52 |
gray matter | 1.36e-18 | 34 |
brain | 1.51e-16 | 47 |
future brain | 1.51e-16 | 47 |
anterior neural tube | 4.70e-16 | 40 |
pre-chordal neural plate | 4.90e-16 | 49 |
regional part of brain | 7.02e-16 | 46 |
regional part of forebrain | 1.08e-15 | 39 |
forebrain | 1.08e-15 | 39 |
future forebrain | 1.08e-15 | 39 |
brain grey matter | 1.69e-15 | 29 |
regional part of telencephalon | 1.69e-15 | 29 |
telencephalon | 1.69e-15 | 29 |
cerebral cortex | 3.20e-11 | 21 |
cerebral hemisphere | 3.20e-11 | 21 |
pallium | 3.20e-11 | 21 |
structure with developmental contribution from neural crest | 7.54e-09 | 92 |
regional part of cerebral cortex | 2.58e-08 | 17 |