FFCP PHASE1:Mm9::chr6:38204109..38204155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330286 | |EntrezGene=330286 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q7W4,Q68FD9 | |UniProt=E9Q7W4,Q68FD9 | ||
|association_with_transcript=-100bp_to_ENSMUST00000169256,NM_194061,uc009bjt.2_5end | |association_with_transcript=-100bp_to_ENSMUST00000169256,NM_194061,uc009bjt.2_5end | ||
|cluster_id=chr6:38204109..38204155,- | |||
|description=CAGE_peak_1_at_D630045J12Rik_5end | |description=CAGE_peak_1_at_D630045J12Rik_5end | ||
|id=chr6:38204109..38204155,- | |id=chr6:38204109..38204155,- | ||
|ontology_enrichment_celltype=CL:0000540!2.14e-12!33;CL:0000047!2.14e-12!33;CL:0000031!2.14e-12!33;CL:0000404!2.14e-12!33;CL:0000117!7.69e-11!23;CL:0000337!7.69e-11!23;CL:0000221!5.89e-10!44;CL:0000133!5.89e-10!44;CL:0002319!9.14e-10!43;CL:0000393!1.20e-09!39;CL:0000211!1.20e-09!39;CL:0000055!1.94e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.14e-12!33;CL:0000047!2.14e-12!33;CL:0000031!2.14e-12!33;CL:0000404!2.14e-12!33;CL:0000117!7.69e-11!23;CL:0000337!7.69e-11!23;CL:0000221!5.89e-10!44;CL:0000133!5.89e-10!44;CL:0002319!9.14e-10!43;CL:0000393!1.20e-09!39;CL:0000211!1.20e-09!39;CL:0000055!1.94e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.51e-12,33;CL:0000047,1.51e-12,33;CL:0000031,1.51e-12,33;CL:0000404,1.51e-12,33;CL:0000117,5.72e-11,23;CL:0000337,5.72e-11,23;CL:0000221,6.89e-10,44;CL:0000133,6.89e-10,44;CL:0002319,1.08e-09,43;CL:0000393,1.16e-09,39;CL:0000211,1.16e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.92e-23!73;UBERON:0005743!8.92e-23!73;UBERON:0000073!1.94e-21!75;UBERON:0001016!1.94e-21!75;UBERON:0002346!1.89e-19!71;UBERON:0003075!1.89e-19!71;UBERON:0007284!1.89e-19!71;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000033!1.46e-18!63;UBERON:0001049!3.81e-18!52;UBERON:0005068!3.81e-18!52;UBERON:0006241!3.81e-18!52;UBERON:0007135!3.81e-18!52;UBERON:0000955!9.63e-17!50;UBERON:0006238!9.63e-17!50;UBERON:0003056!1.12e-16!49;UBERON:0002616!1.44e-16!49;UBERON:0003080!2.53e-14!40;UBERON:0002780!9.95e-14!39;UBERON:0001890!9.95e-14!39;UBERON:0006240!9.95e-14!39;UBERON:0002020!3.61e-13!34;UBERON:0002791!4.00e-11!29;UBERON:0003528!4.00e-11!29;UBERON:0001893!4.00e-11!29;UBERON:0000153!3.47e-09!94;UBERON:0000956!6.24e-09!21;UBERON:0001869!6.24e-09!21;UBERON:0000203!6.24e-09!21;UBERON:0000468!9.30e-09!333;UBERON:0000489!8.22e-08!21;UBERON:0007811!1.09e-07!86;UBERON:0000922!2.06e-07!328;UBERON:0004111!3.96e-07!122;UBERON:0001008!6.39e-07!17;UBERON:0002619!6.83e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!8.92e-23!73;UBERON:0005743!8.92e-23!73;UBERON:0000073!1.94e-21!75;UBERON:0001016!1.94e-21!75;UBERON:0002346!1.89e-19!71;UBERON:0003075!1.89e-19!71;UBERON:0007284!1.89e-19!71;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000033!1.46e-18!63;UBERON:0001049!3.81e-18!52;UBERON:0005068!3.81e-18!52;UBERON:0006241!3.81e-18!52;UBERON:0007135!3.81e-18!52;UBERON:0000955!9.63e-17!50;UBERON:0006238!9.63e-17!50;UBERON:0003056!1.12e-16!49;UBERON:0002616!1.44e-16!49;UBERON:0003080!2.53e-14!40;UBERON:0002780!9.95e-14!39;UBERON:0001890!9.95e-14!39;UBERON:0006240!9.95e-14!39;UBERON:0002020!3.61e-13!34;UBERON:0002791!4.00e-11!29;UBERON:0003528!4.00e-11!29;UBERON:0001893!4.00e-11!29;UBERON:0000153!3.47e-09!94;UBERON:0000956!6.24e-09!21;UBERON:0001869!6.24e-09!21;UBERON:0000203!6.24e-09!21;UBERON:0000468!9.30e-09!333;UBERON:0000489!8.22e-08!21;UBERON:0007811!1.09e-07!86;UBERON:0000922!2.06e-07!328;UBERON:0004111!3.96e-07!122;UBERON:0001008!6.39e-07!17;UBERON:0002619!6.83e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-23,73;UBERON:0002346,6.35e-22,64;UBERON:0003075,6.35e-22,64;UBERON:0007284,6.35e-22,64;UBERON:0001016,1.73e-21,75;UBERON:0004121,5.88e-21,95;UBERON:0000924,5.88e-21,95;UBERON:0006601,5.88e-21,95;UBERON:0010371,2.91e-19,73;UBERON:0000073,5.11e-19,54;UBERON:0001049,2.24e-18,52;UBERON:0005068,2.24e-18,52;UBERON:0006241,2.24e-18,52;UBERON:0007135,2.24e-18,52;UBERON:0003056,6.93e-17,49;UBERON:0000955,2.62e-16,47;UBERON:0006238,2.62e-16,47;UBERON:0002616,3.89e-16,46;UBERON:0003080,1.68e-14,40;UBERON:0002780,6.74e-14,39;UBERON:0001890,6.74e-14,39;UBERON:0006240,6.74e-14,39;UBERON:0002020,2.49e-13,34;UBERON:0010314,3.94e-13,92;UBERON:0003528,2.95e-11,29;UBERON:0002791,2.95e-11,29;UBERON:0001893,2.95e-11,29;UBERON:0000956,4.93e-09,21;UBERON:0001869,4.93e-09,21;UBERON:0000203,4.93e-09,21;UBERON:0000489,6.72e-08,21;UBERON:0002619,5.75e-07,17;UBERON:0001008,6.74e-07,19 | |||
|phase1_expression=4.80446541314382,0,0,0,0,0.33575854382378,1.40167584357315,0.258246646883153,0,0,0,0.0797721589953364,0,0,0.666219523631325,0.202475267389826,0,0,0.137114433605739,0.42438965179803,6.71841992193451,1.39007331681239,0.261199789138935,0.639969691173627,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,1.16364251750945,1.02084678131185,0,0,0,0,0,0,4.28049181116963,3.24406179902447,2.75320128242522,17.2126095756569,2.61630187656536,1.5378032791413,1.74986909166855,2.93971485413261,8.62515386189829,0,0,0,0.514518872071894,2.0057340795713,1.54701627683233,18.0061650165042,14.2827564403449,16.4796164911607,3.04960078862219,2.66788438833342,0.449949858640699,0,0,3.29560121570245,4.99483796918021,12.4427534770173,12.0155285115205,13.6711224878398,12.5686433137674,7.73039893330647,13.229006315215,11.6931474642248,21.1420320920305,3.30347642998166,13.2794831608595,9.67721159514334,18.9916254331479,12.8082701043374,18.7528813400434,3.62937898701795,10.6924895906019,7.79271063661732,9.72274332063103,10.3931326983345,12.8615617619457,0.984440513331393,1.058001841495,0.869593466105033,0.860423876981386,0,2.15881276655127,3.24888208723835,2.68816132258401,2.10666630197628,1.87473354835864,0.519572009205738,2.12003744706204,7.46470124816407,2.56652954828636,10.1922095882658,7.11066703153331,1.5154372870785,0.506719730950197,0,3.53970027129086,0.776813650941515,2.82040064223167,3.46970653532272,5.48037860961854,3.45923245884088,2.56228488939458,4.8211369925639,1.25666591329675,0.494389935468748,1.87979163995885,0.884610551949874,4.20593809863264,2.87093973998512,1.45462575940567,1.86391761218122,15.517382241612,15.4990563041957,1.02182822083437,0.958520996047362,0,0.635351135365324,13.6309481858389,6.8625090422794,7.03664371832041,12.6891753740362,12.7857728665165,11.0127663616567,8.76102820565891,12.220723662038,7.58882520721567,19.9650979162603,5.89237196482127,10.9301172088671,4.82794419310293,7.02242306240862,8.43946979880004,8.57259889306731,8.71173297936978,9.27647073141315,23.0245999957724,11.4251036254406,13.0483195315795,11.6127741948206,7.89104636739269,10.8438427197983,4.87553033131033,7.20237477427802,8.95654200683219,0,0.257347907114715,0.284163499395593,4.34964122324554,5.62862543954631,2.70093092191522,3.78791576936336,2.95146347621106,2.1597395804233,0.930135779001631,1.07309360559848,1.05088808130453,1.31647879930784,1.97000956894914,2.10778904819225,0.877199924551994,3.73235195994786,0.939444931322602,10.7247873767705,12.4514580978934,0,1.05780226665418,12.5840067815788,13.0052536241846,5.7990357594942,6.6555563125703,3.55804870151792,1.71203063501303,0.474529061544512,1.81168850196412,1.00534083520108,1.79060824837036,3.31438948102504,0.898819408654221,2.59365659849633,0,6.82804443431094,8.56863844572966,13.5249282807697,7.94240178596726,10.6673867942194,9.67874314486396,8.41045943752622,10.6279306545314,9.26292494264111,8.63780147452604,3.85388415213294,1.66845105716094,1.17935397067922,0.674586337154561,2.02860121388503,0.241177159752417,1.01850340712568,2.5892652370573,1.29708181420028,0.549122826376163,1.43768206527355,1.11642284300551,1.87222603868736,2.27320990152401,2.51156378930677,0.482443521363367,4.24932337383191,5.30575952957357,6.68156403412306,6.45031325945715,4.22442446919304,4.18765643604539,5.71304738126433,2.73187107000918,6.30540576424764,5.97954662051692,6.69710028361446,4.09658286789345,3.10832967358612,2.74833211304872,0,0,0,1.65562047782839,6.58257418949947,7.3843362553088,7.70494243270374,1.26235463602186,9.4652465824877,5.85658116444958,11.2020166821055,7.16906393857656,7.5751549188014,9.34152551603147,8.09621403349789,6.72188473196017,7.51046778098395,7.39039027770156,4.5420827266646,9.79360820169904,16.4515828947112,26.2302495526331,0,8.98288353773431,5.74414758233027,4.52652191414155,2.95301892880773,4.30409207121498,2.84271122485043,4.36240475373007,4.63446591900138,4.10847785316561,4.21674434299995,9.28219889233682,8.5109901438447,8.46287141947158,8.27895576209629,7.93047029616891,8.51233121482913,8.74007206250146,10.3665882979336,5.17590413494819,10.7948985709307,2.54198485036584,28.8892201452,6.10079135883476,3.55221738730992,2.95533332147964,3.10368094408155,2.79039529566604,0,6.11903496634682,0.683483523191411,2.68302928352189,2.03713980106683,0.376736914009382,0.136694227721025,0.228778173206523,1.01987057996313,1.53946597556024,1.24379976423981,0,6.80122386199441,7.5228202836934,7.45236851670429,5.22720740036172,4.58561383866973,3.50647300600534,5.45512807787217,2.35580347785627,0.777689839750757,0,0.56369293868419,3.73791365109947,4.13646226142744,3.30567020184881,3.48731523389874,3.54807863530634,5.04636126176742,5.33837977860195,5.87212328783981,0.483168241652012,3.16833006883652,0,6.28448167399509,3.59488350076895,1.42912905275575,0.895133478337407,0.79472541912506,0.360586348559907,0.590758108698309,0.403865799792591,0.304827226619999,0.403304740547362,0.292373642219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| ||
|short_description=p1@D630045J12Rik | |short_description=p1@D630045J12Rik | ||
}} | }} |
Latest revision as of 03:17, 27 September 2015
Short description: | p1@D630045J12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D630045J12Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENSMUST00000169256, NM_194061, uc009bjt.2_5end |
EntrezGene: | D630045J12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.51e-12 | 33 |
neuronal stem cell | 1.51e-12 | 33 |
neuroblast | 1.51e-12 | 33 |
electrically signaling cell | 1.51e-12 | 33 |
CNS neuron (sensu Vertebrata) | 5.72e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.72e-11 | 23 |
ectodermal cell | 6.89e-10 | 44 |
neurectodermal cell | 6.89e-10 | 44 |
neural cell | 1.08e-09 | 43 |
electrically responsive cell | 1.16e-09 | 39 |
electrically active cell | 1.16e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.52e-23 | 73 |
neurectoderm | 6.35e-22 | 64 |
neural plate | 6.35e-22 | 64 |
presumptive neural plate | 6.35e-22 | 64 |
nervous system | 1.73e-21 | 75 |
ectoderm-derived structure | 5.88e-21 | 95 |
ectoderm | 5.88e-21 | 95 |
presumptive ectoderm | 5.88e-21 | 95 |
ecto-epithelium | 2.91e-19 | 73 |
regional part of nervous system | 5.11e-19 | 54 |
neural tube | 2.24e-18 | 52 |
neural rod | 2.24e-18 | 52 |
future spinal cord | 2.24e-18 | 52 |
neural keel | 2.24e-18 | 52 |
pre-chordal neural plate | 6.93e-17 | 49 |
brain | 2.62e-16 | 47 |
future brain | 2.62e-16 | 47 |
regional part of brain | 3.89e-16 | 46 |
anterior neural tube | 1.68e-14 | 40 |
regional part of forebrain | 6.74e-14 | 39 |
forebrain | 6.74e-14 | 39 |
future forebrain | 6.74e-14 | 39 |
gray matter | 2.49e-13 | 34 |
structure with developmental contribution from neural crest | 3.94e-13 | 92 |
brain grey matter | 2.95e-11 | 29 |
regional part of telencephalon | 2.95e-11 | 29 |
telencephalon | 2.95e-11 | 29 |
cerebral cortex | 4.93e-09 | 21 |
cerebral hemisphere | 4.93e-09 | 21 |
pallium | 4.93e-09 | 21 |
cavitated compound organ | 6.72e-08 | 21 |
regional part of cerebral cortex | 5.75e-07 | 17 |
renal system | 6.74e-07 | 19 |