FFCP PHASE1:Mm9::chr4:58219511..58219520,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64817 | |EntrezGene=64817 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENSMUST00000149152_5end | |association_with_transcript=-27bp_to_ENSMUST00000149152_5end | ||
|cluster_id=chr4:58219511..58219520,- | |||
|description=CAGE_peak_8_at_Svep1_5end | |description=CAGE_peak_8_at_Svep1_5end | ||
|id=chr4:58219511..58219520,- | |id=chr4:58219511..58219520,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.19e-23,3;CL:0000359,1.19e-23,3;CL:0002539,1.19e-23,3;CL:0000514,1.19e-23,3;CL:0000680,3.76e-12,6;CL:0000187,3.76e-12,6;CL:0000056,3.76e-12,6;CL:0000222,1.70e-10,7;CL:0000355,2.78e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!4.94e-10!57;UBERON:0002048!8.35e-08!14;UBERON:0000117!8.35e-08!14;UBERON:0000171!8.35e-08!14;UBERON:0000170!8.35e-08!14;UBERON:0005597!8.35e-08!14;UBERON:0000118!8.35e-08!14;UBERON:0002323!8.13e-07!37;UBERON:0004458!8.13e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.19e-23,3;UBERON:0004237,1.19e-23,3;UBERON:0004695,1.19e-23,3;UBERON:0002111,1.19e-23,3;UBERON:0004178,1.19e-23,3;UBERON:0000947,6.52e-18,4;UBERON:0001637,6.52e-18,4;UBERON:0004573,6.52e-18,4;UBERON:0003509,6.52e-18,4;UBERON:0004571,6.52e-18,4;UBERON:0010191,6.52e-18,4;UBERON:0004572,6.52e-18,4;UBERON:0000055,1.85e-14,5;UBERON:0007500,1.85e-14,5;UBERON:0001981,1.85e-14,5;UBERON:0002049,1.85e-14,5;UBERON:0007798,1.85e-14,5;UBERON:0004537,1.85e-14,5;UBERON:0006965,1.85e-14,5;UBERON:0006834,1.05e-08,1;UBERON:0001134,2.78e-08,9;UBERON:0002036,2.78e-08,9;UBERON:0002385,2.78e-08,9;UBERON:0000486,2.78e-08,9;UBERON:0007503,2.78e-08,9;UBERON:0001015,2.78e-08,9;UBERON:0002329,2.78e-08,9;UBERON:0003082,2.78e-08,9;UBERON:0003059,2.78e-08,9;UBERON:0007282,2.78e-08,9;UBERON:0004290,2.78e-08,9;UBERON:0009618,2.78e-08,9;UBERON:0000383,1.67e-07,10;UBERON:0007524,7.25e-07,11;UBERON:0003077,7.25e-07,11;UBERON:0007285,7.25e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,4.35920804243913,3.12029478674859,0.782391344348039,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0,0,0.995171334092466,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0.462801338662135,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,1.11189021922435,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.678980343100753,0.234690248288502,1.67506257441816,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,2.45902418065013,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.712262414669021,0.81443479676788,0.494910368917606,0,0.485561272309963,0,0,0,0.614870295887855,0,0,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.404593039154462,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.165458490457098,1.16670713006429,0.904118764344118,0.506868376472335,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.31377732815827,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,4.35920804243913,3.12029478674859,0.782391344348039,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0,0,0.995171334092466,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0.462801338662135,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,1.11189021922435,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.678980343100753,0.234690248288502,1.67506257441816,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,2.45902418065013,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.712262414669021,0.81443479676788,0.494910368917606,0,0.485561272309963,0,0,0,0.614870295887855,0,0,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.404593039154462,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.165458490457098,1.16670713006429,0.904118764344118,0.506868376472335,0.469428954583016,0.39061315453185,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.31377732815827,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p8@Svep1 | |short_description=p8@Svep1 | ||
}} | }} |
Latest revision as of 03:11, 27 September 2015
Short description: | p8@Svep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Svep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | -27bp_to_ENSMUST00000149152_5end |
EntrezGene: | Svep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.19e-23 | 3 |
vascular associated smooth muscle cell | 1.19e-23 | 3 |
aortic smooth muscle cell | 1.19e-23 | 3 |
smooth muscle myoblast | 1.19e-23 | 3 |
muscle precursor cell | 3.76e-12 | 6 |
muscle cell | 3.76e-12 | 6 |
myoblast | 3.76e-12 | 6 |
mesodermal cell | 1.70e-10 | 7 |
multi-potent skeletal muscle stem cell | 2.78e-08 | 9 |