FFCP PHASE1:Mm9::chr18:24867975..24868003,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:24867975..24868003,+ to FFCP PHASE1:Mm9::chr18:24867975..24868003,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225288 | |EntrezGene=225288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q76LL6,F8WHD7,E9Q1S4 | |UniProt=Q76LL6,F8WHD7,E9Q1S4 | ||
|association_with_transcript=29bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end | |||
|cluster_id=chr18:24867975..24868003,+ | |||
|description=CAGE_peak_1_at_Fhod3_5end | |||
|id=chr18:24867975..24868003,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.26e-07!33;CL:0000047!5.26e-07!33;CL:0000031!5.26e-07!33;CL:0000404!5.26e-07!33;CL:0000117!7.28e-07!23;CL:0000337!7.28e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.95e-07,33;CL:0000047,3.95e-07,33;CL:0000031,3.95e-07,33;CL:0000404,3.95e-07,33;CL:0000117,5.51e-07,23;CL:0000337,5.51e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.19e-14!43;UBERON:0004121!2.44e-13!102;UBERON:0000924!2.44e-13!102;UBERON:0006601!2.44e-13!102;UBERON:0000468!1.19e-10!333;UBERON:0007100!2.03e-10!18;UBERON:0000948!2.03e-10!18;UBERON:0005498!2.03e-10!18;UBERON:0004140!2.03e-10!18;UBERON:0009881!2.03e-10!18;UBERON:0004141!2.03e-10!18;UBERON:0003084!2.03e-10!18;UBERON:0007005!2.03e-10!18;UBERON:0004139!2.03e-10!18;UBERON:0004291!2.03e-10!18;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0000033!4.63e-09!63;UBERON:0000073!2.87e-08!75;UBERON:0001016!2.87e-08!75;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0003056!4.32e-08!49;UBERON:0000489!4.82e-08!21;UBERON:0004111!8.60e-08!122;UBERON:0000922!1.34e-07!328;UBERON:0002020!2.89e-07!34;UBERON:0004535!4.71e-07!23;UBERON:0001009!4.71e-07!23;UBERON:0000479!6.61e-07!349;UBERON:0000025!8.40e-07!114;UBERON:0001049!9.02e-07!52;UBERON:0005068!9.02e-07!52;UBERON:0006241!9.02e-07!52;UBERON:0007135!9.02e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.27e-19,92;UBERON:0003103,4.36e-15,43;UBERON:0004121,7.21e-14,95;UBERON:0000924,7.21e-14,95;UBERON:0006601,7.21e-14,95;UBERON:0010371,3.07e-12,73;UBERON:0007100,1.28e-10,18;UBERON:0000948,1.28e-10,18;UBERON:0005498,1.28e-10,18;UBERON:0004140,1.28e-10,18;UBERON:0009881,1.28e-10,18;UBERON:0004141,1.28e-10,18;UBERON:0003084,1.28e-10,18;UBERON:0007005,1.28e-10,18;UBERON:0004139,1.28e-10,18;UBERON:0004291,1.28e-10,18;UBERON:0002346,1.12e-09,64;UBERON:0003075,1.12e-09,64;UBERON:0007284,1.12e-09,64;UBERON:0001016,2.25e-08,75;UBERON:0001017,3.03e-08,73;UBERON:0000489,3.43e-08,21;UBERON:0003056,4.33e-08,49;UBERON:0000922,5.68e-08,320;UBERON:0000073,2.12e-07,54;UBERON:0002020,3.13e-07,34;UBERON:0004111,5.87e-07,122;UBERON:0004535,7.31e-07,23;UBERON:0001009,7.31e-07,23;UBERON:0001049,7.66e-07,52;UBERON:0005068,7.66e-07,52;UBERON:0006241,7.66e-07,52;UBERON:0007135,7.66e-07,52 | |||
|phase1_expression=12.4916100741739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,2.02475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,10.8004978491859,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0.550640256485045,0,2.61630187656536,0.659058548203415,1.36100929351998,1.39986421625363,4.31257693094915,0,0,0,2.31533492432352,4.01146815914259,40.7380952899179,17.601532094785,22.7466121086974,17.747279298173,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,1.49800055259202,1.53687322128622,29.0330914463737,20.2508907497536,26.9215950529769,20.5668708770739,17.8903518170807,8.57435594504678,6.90087391331302,11.9498442259303,27.5289702498472,12.0026097800076,16.2822925251618,18.3321939944969,13.4486836095542,14.5855743755893,17.0301629390842,14.6318278608237,12.5294563176984,27.4004584490511,26.338760947834,21.8087351615602,5.6794644999888,15.0387404612503,3.76823835312181,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,0.448026887097336,13.0613310722529,0.511290967734173,0.259786004602869,0.35333957451034,19.2955485094052,14.115912515575,20.3844191765317,7.11066703153331,0.432982082022428,0,0,8.10705546005326,0.258937883647172,7.27366481417641,5.55153045651635,7.30717147949139,5.99600292865752,4.6724018571313,5.64425794251383,5.02666365318702,1.23597483867187,1.59059292611903,7.96149496754887,15.5296175949513,17.8881629952919,12.6067565815158,0,4.09893115816166,5.65506108396329,1.02182822083437,0.11981512450592,0,0.127070227073065,20.9706895166752,3.20250421973039,6.40837195775608,17.0347833788431,13.8086346958378,16.6230435647648,12.3303359931496,12.4244023897386,20.2783362094452,17.4378703319236,37.6690922036788,11.3204785377552,12.4147136394075,11.884100567153,18.9888070473001,19.7305847538851,28.185018462667,40.8539519080418,71.1434269532293,3.44908788692548,7.56424320671277,6.68614271823006,6.79506770525482,13.6243152120543,19.5021213252413,17.0799173218593,13.733364410476,0,0,0.284163499395593,61.1021028979731,57.6934107553497,62.3014732655111,82.8606574548236,105.859156680103,93.794404635526,130.91661089448,178.670085332146,220.569731731583,214.750604137092,216.701052584406,278.066016742285,262.721377403322,191.008600303214,218.890668998166,3.78521907415429,8.12946437796347,0,0,2.13288250535234,3.0190767341857,2.19074684247559,2.21851877085677,0.667134131534611,0.951128130562796,0,0.823494773620054,1.00534083520108,1.1937388322469,0.58489226135736,0,0,0,9.86273084956025,20.9074778075804,38.3206301288473,44.1923381424332,50.4276466635827,62.8416946217254,94.8548056863859,67.4578376266782,70.4924288007773,71.3235607468007,3.26097889795864,2.16898637430922,0.393117990226406,0,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.372140947668503,0.312037673114561,1.51547326768267,1.61457672169721,3.37710464954357,1.29327233116623,7.39016505904891,3.42226450528254,4.92260748748046,4.69380496577004,7.70528784232352,6.42717830392237,4.87834119644497,8.98520321405289,7.30833475840957,13.3942005672289,2.29408640602033,6.21665934717224,3.03763023021174,0,0.54390568381871,15.2446924635901,12.6930903300177,15.412856638828,14.2998257642488,0,34.8409879542035,11.3582958989852,8.58965237452605,13.7870974548991,8.84184552424442,8.24355094104858,7.92614286208731,12.5491317519217,11.3979784585412,8.30104333687699,9.96096080907602,10.6455063906201,7.30068975035746,10.9134262766896,2.8044920905331,0,0.971122544619926,2.72091201268276,1.88605079755898,2.06711325016541,0.614870295887855,3.10113951801865,1.81766864738753,2.85197902707777,0.316036757935816,1.05418608574999,0,6.46835250932197,9.18311579559682,5.43306471887569,10.7168517515796,6.20690817747958,4.63758925765383,7.0756078858912,4.26250928760439,1.17335854031855,2.33015277950202,5.07215315526412,17.8077153176798,13.4015474157602,24.4870475208313,35.4535861689315,50.0629744222437,0.291480836629851,13.3506217447567,4.95525554313773,3.09580301944834,4.62986318424279,8.4765805652111,3.14396723758358,7.0921233694022,0.169978429993855,0.139951452323658,0,0,2.53068794864908,4.06638934253697,1.72808545314882,1.46361807210128,2.40198820120795,1.34864346384821,1.57041565878138,1.83229159388821,0,13.6694648879124,0,3.88743019714345,2.48187735685646,3.11121901350476,2.71235629303235,1.01373675294467,1.99507305697782,7.16124116641726,2.41176492179135,0.966336483304024,6.04863013141517,0.948033361884535,1.62180172232131,2.2596410576262,1.03936658382236,1.07416017400489,0.79472541912506,0.240390899039938,0.590758108698309,0.302899349844443,0.228620419965,0.100826185136841,0.487289403698762,0.0962118416403295,0.701261413089414,26.3007244993645,0.221985953374065,0.358855426437903,0.503653849092235,1.73870634628971,2.064507229963,1.46521299413812,23.7948900777763,7.02200945649509,23.7195773899168,25.3178880078947,21.7700295106971,22.6846200693668,15.75689795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| |phase1_expression=12.4916100741739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,2.02475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,10.8004978491859,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0.550640256485045,0,2.61630187656536,0.659058548203415,1.36100929351998,1.39986421625363,4.31257693094915,0,0,0,2.31533492432352,4.01146815914259,40.7380952899179,17.601532094785,22.7466121086974,17.747279298173,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,1.49800055259202,1.53687322128622,29.0330914463737,20.2508907497536,26.9215950529769,20.5668708770739,17.8903518170807,8.57435594504678,6.90087391331302,11.9498442259303,27.5289702498472,12.0026097800076,16.2822925251618,18.3321939944969,13.4486836095542,14.5855743755893,17.0301629390842,14.6318278608237,12.5294563176984,27.4004584490511,26.338760947834,21.8087351615602,5.6794644999888,15.0387404612503,3.76823835312181,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,0.448026887097336,13.0613310722529,0.511290967734173,0.259786004602869,0.35333957451034,19.2955485094052,14.115912515575,20.3844191765317,7.11066703153331,0.432982082022428,0,0,8.10705546005326,0.258937883647172,7.27366481417641,5.55153045651635,7.30717147949139,5.99600292865752,4.6724018571313,5.64425794251383,5.02666365318702,1.23597483867187,1.59059292611903,7.96149496754887,15.5296175949513,17.8881629952919,12.6067565815158,0,4.09893115816166,5.65506108396329,1.02182822083437,0.11981512450592,0,0.127070227073065,20.9706895166752,3.20250421973039,6.40837195775608,17.0347833788431,13.8086346958378,16.6230435647648,12.3303359931496,12.4244023897386,20.2783362094452,17.4378703319236,37.6690922036788,11.3204785377552,12.4147136394075,11.884100567153,18.9888070473001,19.7305847538851,28.185018462667,40.8539519080418,71.1434269532293,3.44908788692548,7.56424320671277,6.68614271823006,6.79506770525482,13.6243152120543,19.5021213252413,17.0799173218593,13.733364410476,0,0,0.284163499395593,61.1021028979731,57.6934107553497,62.3014732655111,82.8606574548236,105.859156680103,93.794404635526,130.91661089448,178.670085332146,220.569731731583,214.750604137092,216.701052584406,278.066016742285,262.721377403322,191.008600303214,218.890668998166,3.78521907415429,8.12946437796347,0,0,2.13288250535234,3.0190767341857,2.19074684247559,2.21851877085677,0.667134131534611,0.951128130562796,0,0.823494773620054,1.00534083520108,1.1937388322469,0.58489226135736,0,0,0,9.86273084956025,20.9074778075804,38.3206301288473,44.1923381424332,50.4276466635827,62.8416946217254,94.8548056863859,67.4578376266782,70.4924288007773,71.3235607468007,3.26097889795864,2.16898637430922,0.393117990226406,0,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.372140947668503,0.312037673114561,1.51547326768267,1.61457672169721,3.37710464954357,1.29327233116623,7.39016505904891,3.42226450528254,4.92260748748046,4.69380496577004,7.70528784232352,6.42717830392237,4.87834119644497,8.98520321405289,7.30833475840957,13.3942005672289,2.29408640602033,6.21665934717224,3.03763023021174,0,0.54390568381871,15.2446924635901,12.6930903300177,15.412856638828,14.2998257642488,0,34.8409879542035,11.3582958989852,8.58965237452605,13.7870974548991,8.84184552424442,8.24355094104858,7.92614286208731,12.5491317519217,11.3979784585412,8.30104333687699,9.96096080907602,10.6455063906201,7.30068975035746,10.9134262766896,2.8044920905331,0,0.971122544619926,2.72091201268276,1.88605079755898,2.06711325016541,0.614870295887855,3.10113951801865,1.81766864738753,2.85197902707777,0.316036757935816,1.05418608574999,0,6.46835250932197,9.18311579559682,5.43306471887569,10.7168517515796,6.20690817747958,4.63758925765383,7.0756078858912,4.26250928760439,1.17335854031855,2.33015277950202,5.07215315526412,17.8077153176798,13.4015474157602,24.4870475208313,35.4535861689315,50.0629744222437,0.291480836629851,13.3506217447567,4.95525554313773,3.09580301944834,4.62986318424279,8.4765805652111,3.14396723758358,7.0921233694022,0.169978429993855,0.139951452323658,0,0,2.53068794864908,4.06638934253697,1.72808545314882,1.46361807210128,2.40198820120795,1.34864346384821,1.57041565878138,1.83229159388821,0,13.6694648879124,0,3.88743019714345,2.48187735685646,3.11121901350476,2.71235629303235,1.01373675294467,1.99507305697782,7.16124116641726,2.41176492179135,0.966336483304024,6.04863013141517,0.948033361884535,1.62180172232131,2.2596410576262,1.03936658382236,1.07416017400489,0.79472541912506,0.240390899039938,0.590758108698309,0.302899349844443,0.228620419965,0.100826185136841,0.487289403698762,0.0962118416403295,0.701261413089414,26.3007244993645,0.221985953374065,0.358855426437903,0.503653849092235,1.73870634628971,2.064507229963,1.46521299413812,23.7948900777763,7.02200945649509,23.7195773899168,25.3178880078947,21.7700295106971,22.6846200693668,15.75689795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| ||
|short_description=p1@Fhod3 | |||
}} | }} |
Latest revision as of 02:57, 27 September 2015
Short description: | p1@Fhod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fhod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 29bp_to_ENSMUST00000037097, ENSMUST00000091991, ENSMUST00000115819, ENSMUST00000115820, ENSMUST00000169491, NM_175276, uc008eha.1, uc008ehb.1, uc008ehc.1, uc012bak.1_5end |
EntrezGene: | Fhod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.95e-07 | 33 |
neuronal stem cell | 3.95e-07 | 33 |
neuroblast | 3.95e-07 | 33 |
electrically signaling cell | 3.95e-07 | 33 |
CNS neuron (sensu Vertebrata) | 5.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.51e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.27e-19 | 92 |
compound organ | 4.36e-15 | 43 |
ectoderm-derived structure | 7.21e-14 | 95 |
ectoderm | 7.21e-14 | 95 |
presumptive ectoderm | 7.21e-14 | 95 |
ecto-epithelium | 3.07e-12 | 73 |
primary circulatory organ | 1.28e-10 | 18 |
heart | 1.28e-10 | 18 |
primitive heart tube | 1.28e-10 | 18 |
primary heart field | 1.28e-10 | 18 |
anterior lateral plate mesoderm | 1.28e-10 | 18 |
heart tube | 1.28e-10 | 18 |
heart primordium | 1.28e-10 | 18 |
cardiac mesoderm | 1.28e-10 | 18 |
cardiogenic plate | 1.28e-10 | 18 |
heart rudiment | 1.28e-10 | 18 |
neurectoderm | 1.12e-09 | 64 |
neural plate | 1.12e-09 | 64 |
presumptive neural plate | 1.12e-09 | 64 |
nervous system | 2.25e-08 | 75 |
central nervous system | 3.03e-08 | 73 |
cavitated compound organ | 3.43e-08 | 21 |
pre-chordal neural plate | 4.33e-08 | 49 |
embryo | 5.68e-08 | 320 |
regional part of nervous system | 2.12e-07 | 54 |
gray matter | 3.13e-07 | 34 |
anatomical conduit | 5.87e-07 | 122 |
cardiovascular system | 7.31e-07 | 23 |
circulatory system | 7.31e-07 | 23 |
neural tube | 7.66e-07 | 52 |
neural rod | 7.66e-07 | 52 |
future spinal cord | 7.66e-07 | 52 |
neural keel | 7.66e-07 | 52 |