FFCP PHASE1:Mm9::chr18:24762453..24762473,+: Difference between revisions
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{{FFCP|EntrezGene=58523|HGNC=|UniProt=Q91WG4,Q8C8Q3|association_with_transcript=0bp_to_ENSMUST00000025120,ENSMUST00000115825,NM_021448,uc008egw.1,uc008egx.1,uc012baj.1_5end|description=CAGE_peak_1_at_Elp2_5end|id=chr18:24762453..24762473,+|ontology_enrichment_celltype=CL:0000117!1.57e-08!23;CL:0000337!1.57e-08!23;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33;CL:0000393!5.18e-07!39;CL:0000211!5.18e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-08,23;CL:0000337,1.57e-08,23;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0000393,5.18e-07,39;CL:0000211,5.18e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.99e-16!94;UBERON:0000033!8.13e-14!63;UBERON:0003056!3.09e-13!49;UBERON:0002346!3.76e-13!71;UBERON:0003075!3.76e-13!71;UBERON:0007284!3.76e-13!71;UBERON:0007811!8.36e-13!86;UBERON:0000955!1.23e-11!50;UBERON:0006238!1.23e-11!50;UBERON:0002616!1.89e-11!49;UBERON:0004121!4.68e-11!102;UBERON:0000924!4.68e-11!102;UBERON:0006601!4.68e-11!102;UBERON:0001049!8.28e-11!52;UBERON:0005068!8.28e-11!52;UBERON:0006241!8.28e-11!52;UBERON:0007135!8.28e-11!52;UBERON:0003080!8.85e-11!40;UBERON:0000073!1.59e-10!75;UBERON:0001016!1.59e-10!75;UBERON:0002780!2.45e-10!39;UBERON:0001890!2.45e-10!39;UBERON:0006240!2.45e-10!39;UBERON:0001017!2.84e-10!73;UBERON:0005743!2.84e-10!73;UBERON:0002791!2.13e-07!29;UBERON:0003528!2.13e-07!29;UBERON:0001893!2.13e-07!29;UBERON:0002020!2.99e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.09e-13,49;UBERON:0002346,8.94e-13,64;UBERON:0003075,8.94e-13,64;UBERON:0007284,8.94e-13,64;UBERON:0010371,1.33e-11,73;UBERON:0000073,2.33e-11,54;UBERON:0001049,8.28e-11,52;UBERON:0005068,8.28e-11,52;UBERON:0006241,8.28e-11,52;UBERON:0007135,8.28e-11,52;UBERON:0003080,8.85e-11,40;UBERON:0000955,1.11e-10,47;UBERON:0006238,1.11e-10,47;UBERON:0001016,1.59e-10,75;UBERON:0002616,1.69e-10,46;UBERON:0004121,1.82e-10,95;UBERON:0000924,1.82e-10,95;UBERON:0006601,1.82e-10,95;UBERON:0002780,2.45e-10,39;UBERON:0001890,2.45e-10,39;UBERON:0006240,2.45e-10,39;UBERON:0001017,2.84e-10,73;UBERON:0010314,2.03e-09,92;UBERON:0003528,2.13e-07,29;UBERON:0002791,2.13e-07,29;UBERON:0001893,2.13e-07,29;UBERON:0002020,2.99e-07,34|phase1_expression=44.8416771893423,7.67745896806594,6.82498859084304,6.0492842261366,6.01074875935617,12.4230661214798,11.2134067485852,34.9924206526672,14.5012383816217,12.8735489477096,36.6406452002581,39.9658516566635,30.816131387617,35.9297853942079,18.3210368998615,18.0202987976945,18.88817070946,29.180250295637,30.7136331276855,17.8243653755173,28.7446320710616,56.9930059893082,63.4715487607613,21.4389846543165,20.188016733911,5.16808767703518,7.32295393470427,9.69620547086501,15.2018735565099,21.674591159354,11.9734475753865,52.0725152236898,58.4311548205342,47.5445043046316,32.9290846516453,32.748225135623,30.421234083093,20.5080499061085,19.533383613095,26.6997109426637,20.5881020810855,17.7591826089196,21.3624555333708,32.8590694916257,30.6158332282934,33.7726023977494,10.1710874765245,22.2385659508055,14.0599156950062,24.1093074852111,24.3576373628131,17.2503077237966,25.1673909086605,28.2891235384424,25.5431287348273,29.327575708098,21.203474555468,25.2679325215947,34.3937983461316,43.9062512795787,43.1005354384202,16.6033820713875,15.1180115338894,8.99899717281399,11.8663963508037,7.8152812644071,4.49400165777607,7.30014780110954,50.7042204188456,44.2819477727945,47.323116304061,20.5668708770739,24.2955395046775,45.5665773079629,59.999264857416,48.7185956903311,36.3382407297983,42.7752582585379,38.7088463805734,35.6092976871523,54.4351479434337,48.4449434617787,42.9941818462127,45.5837714125661,41.7139216430692,36.8285731842085,41.5725307933381,37.0934897192348,31.9564535866037,33.5537726874128,21.7398366526258,26.673140186423,11.5595126730318,21.5881276655127,19.4932925234301,12.5447528387254,23.4542181620026,40.9032774187339,31.4341065569471,26.8538076627859,37.3235062408203,11.5493829672886,20.3844191765317,14.2213340630666,28.360326372469,29.1363845296363,23.7596489156948,18.2694207550496,30.5546702703663,32.8057127333263,33.135697412332,35.0135300058962,27.9044751679831,36.0227110920768,29.5147654910619,27.3953169098693,18.539622580078,21.5453041810668,20.3460426948471,17.6325866442676,17.0047969214503,20.3647606316793,24.2309289583559,38.0615036115011,43.7743617240121,20.1811073614787,33.068974363634,37.7938720525847,36.9774360782618,43.5890760668034,28.3650373747548,35.5601816479406,48.1493366932606,38.6130340568799,38.6485762880782,36.5042841902455,30.0426123358433,19.7807083270048,22.7450482590307,21.6755111563068,56.0819109169253,46.4402250955615,42.4946626340624,50.787523610636,42.0465564755206,46.2490530228308,35.7940587818164,28.7160741520307,56.6943821413375,52.5714902866538,45.0434877859709,40.3320147666738,50.0485048606076,29.6014341543842,40.9506451451808,46.7730527023459,47.7504967373,37.8301423458631,40.351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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58523 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q91WG4,Q8C8Q3 | |||
|association_with_transcript=0bp_to_ENSMUST00000025120,ENSMUST00000115825,NM_021448,uc008egw.1,uc008egx.1,uc012baj.1_5end | |||
|cluster_id=chr18:24762453..24762473,+ | |||
|description=CAGE_peak_1_at_Elp2_5end | |||
|id=chr18:24762453..24762473,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.57e-08!23;CL:0000337!1.57e-08!23;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33;CL:0000393!5.18e-07!39;CL:0000211!5.18e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-08,23;CL:0000337,1.57e-08,23;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0000393,5.18e-07,39;CL:0000211,5.18e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.99e-16!94;UBERON:0000033!8.13e-14!63;UBERON:0003056!3.09e-13!49;UBERON:0002346!3.76e-13!71;UBERON:0003075!3.76e-13!71;UBERON:0007284!3.76e-13!71;UBERON:0007811!8.36e-13!86;UBERON:0000955!1.23e-11!50;UBERON:0006238!1.23e-11!50;UBERON:0002616!1.89e-11!49;UBERON:0004121!4.68e-11!102;UBERON:0000924!4.68e-11!102;UBERON:0006601!4.68e-11!102;UBERON:0001049!8.28e-11!52;UBERON:0005068!8.28e-11!52;UBERON:0006241!8.28e-11!52;UBERON:0007135!8.28e-11!52;UBERON:0003080!8.85e-11!40;UBERON:0000073!1.59e-10!75;UBERON:0001016!1.59e-10!75;UBERON:0002780!2.45e-10!39;UBERON:0001890!2.45e-10!39;UBERON:0006240!2.45e-10!39;UBERON:0001017!2.84e-10!73;UBERON:0005743!2.84e-10!73;UBERON:0002791!2.13e-07!29;UBERON:0003528!2.13e-07!29;UBERON:0001893!2.13e-07!29;UBERON:0002020!2.99e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.09e-13,49;UBERON:0002346,8.94e-13,64;UBERON:0003075,8.94e-13,64;UBERON:0007284,8.94e-13,64;UBERON:0010371,1.33e-11,73;UBERON:0000073,2.33e-11,54;UBERON:0001049,8.28e-11,52;UBERON:0005068,8.28e-11,52;UBERON:0006241,8.28e-11,52;UBERON:0007135,8.28e-11,52;UBERON:0003080,8.85e-11,40;UBERON:0000955,1.11e-10,47;UBERON:0006238,1.11e-10,47;UBERON:0001016,1.59e-10,75;UBERON:0002616,1.69e-10,46;UBERON:0004121,1.82e-10,95;UBERON:0000924,1.82e-10,95;UBERON:0006601,1.82e-10,95;UBERON:0002780,2.45e-10,39;UBERON:0001890,2.45e-10,39;UBERON:0006240,2.45e-10,39;UBERON:0001017,2.84e-10,73;UBERON:0010314,2.03e-09,92;UBERON:0003528,2.13e-07,29;UBERON:0002791,2.13e-07,29;UBERON:0001893,2.13e-07,29;UBERON:0002020,2.99e-07,34 | |||
|phase1_expression=44.8416771893423,7.67745896806594,6.82498859084304,6.0492842261366,6.01074875935617,12.4230661214798,11.2134067485852,34.9924206526672,14.5012383816217,12.8735489477096,36.6406452002581,39.9658516566635,30.816131387617,35.9297853942079,18.3210368998615,18.0202987976945,18.88817070946,29.180250295637,30.7136331276855,17.8243653755173,28.7446320710616,56.9930059893082,63.4715487607613,21.4389846543165,20.188016733911,5.16808767703518,7.32295393470427,9.69620547086501,15.2018735565099,21.674591159354,11.9734475753865,52.0725152236898,58.4311548205342,47.5445043046316,32.9290846516453,32.748225135623,30.421234083093,20.5080499061085,19.533383613095,26.6997109426637,20.5881020810855,17.7591826089196,21.3624555333708,32.8590694916257,30.6158332282934,33.7726023977494,10.1710874765245,22.2385659508055,14.0599156950062,24.1093074852111,24.3576373628131,17.2503077237966,25.1673909086605,28.2891235384424,25.5431287348273,29.327575708098,21.203474555468,25.2679325215947,34.3937983461316,43.9062512795787,43.1005354384202,16.6033820713875,15.1180115338894,8.99899717281399,11.8663963508037,7.8152812644071,4.49400165777607,7.30014780110954,50.7042204188456,44.2819477727945,47.323116304061,20.5668708770739,24.2955395046775,45.5665773079629,59.999264857416,48.7185956903311,36.3382407297983,42.7752582585379,38.7088463805734,35.6092976871523,54.4351479434337,48.4449434617787,42.9941818462127,45.5837714125661,41.7139216430692,36.8285731842085,41.5725307933381,37.0934897192348,31.9564535866037,33.5537726874128,21.7398366526258,26.673140186423,11.5595126730318,21.5881276655127,19.4932925234301,12.5447528387254,23.4542181620026,40.9032774187339,31.4341065569471,26.8538076627859,37.3235062408203,11.5493829672886,20.3844191765317,14.2213340630666,28.360326372469,29.1363845296363,23.7596489156948,18.2694207550496,30.5546702703663,32.8057127333263,33.135697412332,35.0135300058962,27.9044751679831,36.0227110920768,29.5147654910619,27.3953169098693,18.539622580078,21.5453041810668,20.3460426948471,17.6325866442676,17.0047969214503,20.3647606316793,24.2309289583559,38.0615036115011,43.7743617240121,20.1811073614787,33.068974363634,37.7938720525847,36.9774360782618,43.5890760668034,28.3650373747548,35.5601816479406,48.1493366932606,38.6130340568799,38.6485762880782,36.5042841902455,30.0426123358433,19.7807083270048,22.7450482590307,21.6755111563068,56.0819109169253,46.4402250955615,42.4946626340624,50.787523610636,42.0465564755206,46.2490530228308,35.7940587818164,28.7160741520307,56.6943821413375,52.5714902866538,45.0434877859709,40.3320147666738,50.0485048606076,29.6014341543842,40.9506451451808,46.7730527023459,47.7504967373,37.8301423458631,40.3512169141742,28.9976081549703,40.5730083767296,32.4111710629827,28.6461130058104,27.9405209081313,30.0820870130388,20.4629871380359,26.0225199357631,20.0836388871532,23.5320585376277,26.2667942526552,17.2676564332673,18.5673984030172,20.1986106067767,19.7283435577747,37.8521907415429,43.6315556488166,12.8863325363681,20.6271441997565,51.6157566295266,48.3052277469712,33.2478050211001,30.2525286935014,23.5720726475563,25.6804595251955,23.7264530772256,21.2461651593974,22.6201687920243,24.2726895890204,21.8359777573415,16.178749355776,18.5878722892237,16.9270082266212,40.9682666058656,40.7867190016732,28.1769339182701,40.7302655690629,36.269115100346,30.158402552837,28.7093878544128,26.717436784308,26.0617888216682,27.0239788988743,19.862326014839,27.0289071260072,27.3217003207352,22.7110733508702,18.4602710463538,21.7059443777175,25.2079593263606,20.1387296215567,22.0503908414048,23.0631587077988,18.6898668485561,23.0727387554472,26.2111645416231,22.7320990152401,24.2186508254581,24.6046195895317,27.1587189544909,39.4142136482608,44.326473592231,42.0967812722467,38.7238909676028,30.4861388544105,22.6141458841713,18.7328301943487,24.1181770482472,24.1396511717165,22.0047580747332,24.9072238367922,25.0393223705549,24.4456909002755,22.6186925908908,33.72215239676,21.1458637398186,30.0771053472158,38.6926921870579,33.5225423653701,28.5246804955415,18.1779067587149,31.8663301610419,23.0358859135017,27.3587715120655,33.4556317133573,33.1970024382767,27.1753469557279,25.9078849071932,30.1023533648651,26.8795689003636,35.3453448063988,33.2139799387349,45.0505977278156,36.3237919358475,27.8799507823585,14.6019652173959,42.2438306909668,30.5346792534399,27.9135518038729,18.6040192514887,23.6725063916824,23.7754029714763,25.0838273339479,28.5197902707777,24.3348303610578,16.8669773719998,12.3762651897824,36.7674774214091,48.7965564824851,47.4746369482709,42.8674070063185,33.1626236911052,37.992558149241,37.1880786560793,34.7090041990643,23.2324990983073,20.3358788029267,22.934953397716,14.8397627647332,29.2250612319589,26.0551835689633,25.6650539606743,26.0984030594647,20.6951394007194,42.2769688583962,19.3084095301574,33.0218988741156,29.6311243791539,25.0530047816239,23.7847956234584,24.2504863598914,30.0861821089124,37.0871348657694,27.0871948656671,23.8667654503778,52.669942931259,3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| |||
|short_description=p1@Elp2 | |||
}} |
Latest revision as of 02:55, 27 September 2015
Short description: | p1@Elp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Elp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000025120, ENSMUST00000115825, NM_021448, uc008egw.1, uc008egx.1, uc012baj.1_5end |
EntrezGene: | Elp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.57e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-08 | 23 |
neuron | 1.34e-07 | 33 |
neuronal stem cell | 1.34e-07 | 33 |
neuroblast | 1.34e-07 | 33 |
electrically signaling cell | 1.34e-07 | 33 |
electrically responsive cell | 5.18e-07 | 39 |
electrically active cell | 5.18e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.09e-13 | 49 |
neurectoderm | 8.94e-13 | 64 |
neural plate | 8.94e-13 | 64 |
presumptive neural plate | 8.94e-13 | 64 |
ecto-epithelium | 1.33e-11 | 73 |
regional part of nervous system | 2.33e-11 | 54 |
neural tube | 8.28e-11 | 52 |
neural rod | 8.28e-11 | 52 |
future spinal cord | 8.28e-11 | 52 |
neural keel | 8.28e-11 | 52 |
anterior neural tube | 8.85e-11 | 40 |
brain | 1.11e-10 | 47 |
future brain | 1.11e-10 | 47 |
nervous system | 1.59e-10 | 75 |
regional part of brain | 1.69e-10 | 46 |
ectoderm-derived structure | 1.82e-10 | 95 |
ectoderm | 1.82e-10 | 95 |
presumptive ectoderm | 1.82e-10 | 95 |
regional part of forebrain | 2.45e-10 | 39 |
forebrain | 2.45e-10 | 39 |
future forebrain | 2.45e-10 | 39 |
central nervous system | 2.84e-10 | 73 |
structure with developmental contribution from neural crest | 2.03e-09 | 92 |
brain grey matter | 2.13e-07 | 29 |
regional part of telencephalon | 2.13e-07 | 29 |
telencephalon | 2.13e-07 | 29 |
gray matter | 2.99e-07 | 34 |