FFCP PHASE1:Mm9::chr2:91023174..91023217,-: Difference between revisions
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{{FFCP|EntrezGene=228355|HGNC=|UniProt=A6PWP8,A2AGR0,Q80U28|association_with_transcript=0bp_to_ENSMUST00000066420,ENSMUST00000111367,ENSMUST00000130395,ENSMUST00000150517,NM_001177719,NM_145527,uc008kut.2,uc008kuu.2,uc008kva.2,uc012bzh.1_5end|description=CAGE_peak_2_at_Madd_5end|id=chr2:91023174..91023217,-|ontology_enrichment_celltype=CL:0000117!6.50e-07!23;CL:0000337!6.50e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.47e-07,23;CL:0000337,6.47e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.77e-14!63;UBERON:0000955!6.08e-14!50;UBERON:0006238!6.08e-14!50;UBERON:0002616!1.40e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0007023!1.11e-12!51;UBERON:0003080!2.21e-11!40;UBERON:0003056!3.55e-11!49;UBERON:0002780!8.02e-11!39;UBERON:0001890!8.02e-11!39;UBERON:0006240!8.02e-11!39;UBERON:0007811!2.07e-10!86;UBERON:0000064!2.62e-10!99;UBERON:0004121!4.53e-10!102;UBERON:0000924!4.53e-10!102;UBERON:0006601!4.53e-10!102;UBERON:0002346!5.34e-10!71;UBERON:0003075!5.34e-10!71;UBERON:0007284!5.34e-10!71;UBERON:0002020!5.92e-10!34;UBERON:0000153!7.43e-10!94;UBERON:0001017!2.63e-09!73;UBERON:0005743!2.63e-09!73;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0000073!3.46e-08!75;UBERON:0001016!3.46e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-14,54;UBERON:0010371,4.19e-14,73;UBERON:0001049,2.24e-13,52;UBERON:0005068,2.24e-13,52;UBERON:0006241,2.24e-13,52;UBERON:0007135,2.24e-13,52;UBERON:0007023,1.10e-12,51;UBERON:0000955,2.61e-12,47;UBERON:0006238,2.61e-12,47;UBERON:0002616,5.86e-12,46;UBERON:0002346,1.24e-11,64;UBERON:0003075,1.24e-11,64;UBERON:0007284,1.24e-11,64;UBERON:0003080,2.19e-11,40;UBERON:0004121,3.45e-11,95;UBERON:0000924,3.45e-11,95;UBERON:0006601,3.45e-11,95;UBERON:0003056,3.53e-11,49;UBERON:0002780,7.97e-11,39;UBERON:0001890,7.97e-11,39;UBERON:0006240,7.97e-11,39;UBERON:0002020,5.89e-10,34;UBERON:0001017,2.87e-09,73;UBERON:0003528,4.00e-09,29;UBERON:0002791,4.00e-09,29;UBERON:0001893,4.00e-09,29;UBERON:0001016,3.74e-08,75|phase1_expression=5.44506080156299,18.8446720125255,16.8349718574128,10.5862473957391,15.0268718983904,13.0945832091274,7.2419918584613,5.55230290798778,3.51971805379167,2.80877431586392,3.25314139628459,1.7549874978974,7.36163138704185,4.98296293788285,1.99865857089398,2.83465374345756,3.49780939064073,4.41647031501533,3.83920414096069,5.51706547337439,5.27268398936633,2.08510997521859,2.87319768052829,7.1996590257033,7.11168771308227,16.0784949952206,10.7690499039769,10.5580904016086,6.08074942260396,8.82105454159758,7.53883736228036,3.81018404075779,2.46025915033828,0,4.91047753577167,3.65716219788683,3.47087905646027,5.85944283031671,4.6880120671428,5.23523743973798,8.2352408324342,7.5135003345429,2.91306211818692,0.755380907853464,0.811015449756117,0.183546752161682,0,1.74420125104357,3.51497892375155,1.36100929351998,2.93971485413261,5.75010257459886,4.36234775750115,8.70434570413613,0.336093799142464,0.257259436035947,1.14613375975503,0.515672092277442,9.1042407386819,15.340738398889,7.60597684207415,1.69422266034566,5.33576877666684,0.899899717281399,0,2.8419204597844,1.19840044207362,0.768436610643109,4.25127410464758,3.78016627328734,5.25812403378455,8.2838785477103,5.07997644188711,4.65465037016825,3.64212789869298,4.5960939330501,16.5173821499083,15.3224805702225,13.5173749265494,11.6059933202571,10.7040543014819,5.2091337055676,12.0048689570594,12.380777420697,15.1270265299042,6.77645746589436,4.55589378557129,7.08317894136142,0.681535739998656,1.28471652181535,5.2175607966302,3.44169550792555,2.03991400112325,4.31762553310254,1.29955283489534,3.13618820968135,3.37066608316204,0.852151612890289,1.29893002301434,2.12003744706204,3.09855523508697,3.84979432242953,0,7.11066703153331,2.16491041011214,2.02687892380079,1.51657333504435,4.33898742932428,4.66088190564909,4.00793775475027,1.56136794089522,3.34912026143355,2.7673859670727,3.3158980921577,3.52766121407114,2.76466500925286,3.21353458054686,2.02439099687876,5.30766331169925,1.7794353494215,2.65009822152472,1.93950101254089,14.9113408974498,22.5441213698891,20.5257772677186,10.4737392635522,0.479260498023681,0.599902730993408,0.762421362438388,15.4284358586967,14.1825186873774,9.92669381691629,15.6441888173049,12.7857728665165,14.5451631191692,10.707923362472,1.32391173005411,3.6078021476927,8.33985102831127,24.411255282831,2.47228841629137,1.14951052216736,1.80062129805349,3.76762044589288,5.64702942956021,6.79002717509704,7.77724313845749,24.3181168494675,1.72454394346274,3.02569728268511,1.58356011747554,3.94552318369635,4.17070873838397,5.57203466435466,5.14455341019859,1.19420560091096,0,0.772043721344145,1.98914449576915,2.27838349789052,0.703578179943289,1.62055855314913,1.18372367792605,1.37734962223183,1.54267112887378,1.62773761325285,1.3413670069981,1.16765342367169,1.48103864922132,0.656669856316381,1.621376190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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228355 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A6PWP8,A2AGR0,Q80U28 | |||
|association_with_transcript=0bp_to_ENSMUST00000066420,ENSMUST00000111367,ENSMUST00000130395,ENSMUST00000150517,NM_001177719,NM_145527,uc008kut.2,uc008kuu.2,uc008kva.2,uc012bzh.1_5end | |||
|cluster_id=chr2:91023174..91023217,- | |||
|description=CAGE_peak_2_at_Madd_5end | |||
|id=chr2:91023174..91023217,- | |||
|ontology_enrichment_celltype=CL:0000117!6.50e-07!23;CL:0000337!6.50e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.47e-07,23;CL:0000337,6.47e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.77e-14!63;UBERON:0000955!6.08e-14!50;UBERON:0006238!6.08e-14!50;UBERON:0002616!1.40e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0007023!1.11e-12!51;UBERON:0003080!2.21e-11!40;UBERON:0003056!3.55e-11!49;UBERON:0002780!8.02e-11!39;UBERON:0001890!8.02e-11!39;UBERON:0006240!8.02e-11!39;UBERON:0007811!2.07e-10!86;UBERON:0000064!2.62e-10!99;UBERON:0004121!4.53e-10!102;UBERON:0000924!4.53e-10!102;UBERON:0006601!4.53e-10!102;UBERON:0002346!5.34e-10!71;UBERON:0003075!5.34e-10!71;UBERON:0007284!5.34e-10!71;UBERON:0002020!5.92e-10!34;UBERON:0000153!7.43e-10!94;UBERON:0001017!2.63e-09!73;UBERON:0005743!2.63e-09!73;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0000073!3.46e-08!75;UBERON:0001016!3.46e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-14,54;UBERON:0010371,4.19e-14,73;UBERON:0001049,2.24e-13,52;UBERON:0005068,2.24e-13,52;UBERON:0006241,2.24e-13,52;UBERON:0007135,2.24e-13,52;UBERON:0007023,1.10e-12,51;UBERON:0000955,2.61e-12,47;UBERON:0006238,2.61e-12,47;UBERON:0002616,5.86e-12,46;UBERON:0002346,1.24e-11,64;UBERON:0003075,1.24e-11,64;UBERON:0007284,1.24e-11,64;UBERON:0003080,2.19e-11,40;UBERON:0004121,3.45e-11,95;UBERON:0000924,3.45e-11,95;UBERON:0006601,3.45e-11,95;UBERON:0003056,3.53e-11,49;UBERON:0002780,7.97e-11,39;UBERON:0001890,7.97e-11,39;UBERON:0006240,7.97e-11,39;UBERON:0002020,5.89e-10,34;UBERON:0001017,2.87e-09,73;UBERON:0003528,4.00e-09,29;UBERON:0002791,4.00e-09,29;UBERON:0001893,4.00e-09,29;UBERON:0001016,3.74e-08,75 | |||
|phase1_expression=5.44506080156299,18.8446720125255,16.8349718574128,10.5862473957391,15.0268718983904,13.0945832091274,7.2419918584613,5.55230290798778,3.51971805379167,2.80877431586392,3.25314139628459,1.7549874978974,7.36163138704185,4.98296293788285,1.99865857089398,2.83465374345756,3.49780939064073,4.41647031501533,3.83920414096069,5.51706547337439,5.27268398936633,2.08510997521859,2.87319768052829,7.1996590257033,7.11168771308227,16.0784949952206,10.7690499039769,10.5580904016086,6.08074942260396,8.82105454159758,7.53883736228036,3.81018404075779,2.46025915033828,0,4.91047753577167,3.65716219788683,3.47087905646027,5.85944283031671,4.6880120671428,5.23523743973798,8.2352408324342,7.5135003345429,2.91306211818692,0.755380907853464,0.811015449756117,0.183546752161682,0,1.74420125104357,3.51497892375155,1.36100929351998,2.93971485413261,5.75010257459886,4.36234775750115,8.70434570413613,0.336093799142464,0.257259436035947,1.14613375975503,0.515672092277442,9.1042407386819,15.340738398889,7.60597684207415,1.69422266034566,5.33576877666684,0.899899717281399,0,2.8419204597844,1.19840044207362,0.768436610643109,4.25127410464758,3.78016627328734,5.25812403378455,8.2838785477103,5.07997644188711,4.65465037016825,3.64212789869298,4.5960939330501,16.5173821499083,15.3224805702225,13.5173749265494,11.6059933202571,10.7040543014819,5.2091337055676,12.0048689570594,12.380777420697,15.1270265299042,6.77645746589436,4.55589378557129,7.08317894136142,0.681535739998656,1.28471652181535,5.2175607966302,3.44169550792555,2.03991400112325,4.31762553310254,1.29955283489534,3.13618820968135,3.37066608316204,0.852151612890289,1.29893002301434,2.12003744706204,3.09855523508697,3.84979432242953,0,7.11066703153331,2.16491041011214,2.02687892380079,1.51657333504435,4.33898742932428,4.66088190564909,4.00793775475027,1.56136794089522,3.34912026143355,2.7673859670727,3.3158980921577,3.52766121407114,2.76466500925286,3.21353458054686,2.02439099687876,5.30766331169925,1.7794353494215,2.65009822152472,1.93950101254089,14.9113408974498,22.5441213698891,20.5257772677186,10.4737392635522,0.479260498023681,0.599902730993408,0.762421362438388,15.4284358586967,14.1825186873774,9.92669381691629,15.6441888173049,12.7857728665165,14.5451631191692,10.707923362472,1.32391173005411,3.6078021476927,8.33985102831127,24.411255282831,2.47228841629137,1.14951052216736,1.80062129805349,3.76762044589288,5.64702942956021,6.79002717509704,7.77724313845749,24.3181168494675,1.72454394346274,3.02569728268511,1.58356011747554,3.94552318369635,4.17070873838397,5.57203466435466,5.14455341019859,1.19420560091096,0,0.772043721344145,1.98914449576915,2.27838349789052,0.703578179943289,1.62055855314913,1.18372367792605,1.37734962223183,1.54267112887378,1.62773761325285,1.3413670069981,1.16765342367169,1.48103864922132,0.656669856316381,1.62137619091711,3.21639972335731,1.3173006917463,3.35516046900929,13.0379768109759,8.43817821510132,11.8950761874167,4.7601101999438,1.91959425481711,2.09013004674395,3.35055399437443,3.22693639397348,4.44756087689741,3.23383564391351,9.96511029243474,5.59976446061637,4.27269854960458,2.78539060857611,4.48417400373976,5.39291645192533,7.13255564586491,9.35963984295526,0.948339504765408,2.62771579002376,1.1270773567308,2.8511185898344,1.35766741017338,2.94570443539338,3.22506339333712,4.72352473534727,5.80895293013087,4.44229790118482,2.07516838961004,2.66952169145751,2.75182593158484,3.37293168577281,2.02860121388503,1.4470629585145,1.52775511068852,1.43848068725405,2.2698931748505,1.92192989231657,11.5014565221884,2.60498663367952,3.74445207737473,2.27320990152401,2.33216637578486,4.3419916922703,3.51031061316549,2.4633883530163,1.95557971730431,1.35796068620151,1.17345124144251,3.35012514883632,4.04674189506223,4.09780660501378,2.04925687338048,1.10732344824387,3.6674596791222,2.13022309130459,3.45369963731791,2.60368305446721,1.50791283939272,1.08781136763742,14.2611639175521,9.3818493743609,13.4862495589745,13.5965556446956,1.96721934452011,2.7771801992481,1.57754109708128,1.56175497718655,2.58508077279359,0.716906393857656,1.33679204449436,0.849229592366497,0.809621403349789,1.46127928955656,1.58115111178609,8.67567554338879,3.26462195979018,2.31485284767432,1.62886959353576,5.44401405809367,17.2568679841952,2.6705869977048,3.93020624054176,3.39489143560617,5.90603785761546,7.37844355065426,3.87642439752332,3.63533729477506,2.85197902707777,6.32073515871632,11.5960469432499,9.28219889233682,19.0646179222121,2.16073312837572,3.75140182969988,4.71541477069503,5.67488747655275,8.56170324489939,6.74650984468696,6.08929898229199,2.81606049676452,5.08396970073168,12.7906470871878,8.244312647074,7.42736362801165,6.81536051688161,9.19167048824151,10.0125948844487,9.32738677215522,11.6817940266621,3.75915937755276,2.47664241555867,2.22233432843654,1.88368457004691,3.2806614653046,2.74533807847827,2.71965487990169,2.37917468950219,2.76399947608848,8.59203556213602,1.26534397432454,1.62655573701479,4.64422965533745,6.27264888043406,7.6426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| |||
|short_description=p2@Madd | |||
}} |
Latest revision as of 02:48, 27 September 2015
Short description: | p2@Madd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Madd_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066420, ENSMUST00000111367, ENSMUST00000130395, ENSMUST00000150517, NM_001177719, NM_145527, uc008kut.2, uc008kuu.2, uc008kva.2, uc012bzh.1_5end |
EntrezGene: | Madd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.47e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.47e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.36e-14 | 54 |
ecto-epithelium | 4.19e-14 | 73 |
neural tube | 2.24e-13 | 52 |
neural rod | 2.24e-13 | 52 |
future spinal cord | 2.24e-13 | 52 |
neural keel | 2.24e-13 | 52 |
adult organism | 1.10e-12 | 51 |
brain | 2.61e-12 | 47 |
future brain | 2.61e-12 | 47 |
regional part of brain | 5.86e-12 | 46 |
neurectoderm | 1.24e-11 | 64 |
neural plate | 1.24e-11 | 64 |
presumptive neural plate | 1.24e-11 | 64 |
anterior neural tube | 2.19e-11 | 40 |
ectoderm-derived structure | 3.45e-11 | 95 |
ectoderm | 3.45e-11 | 95 |
presumptive ectoderm | 3.45e-11 | 95 |
pre-chordal neural plate | 3.53e-11 | 49 |
regional part of forebrain | 7.97e-11 | 39 |
forebrain | 7.97e-11 | 39 |
future forebrain | 7.97e-11 | 39 |
gray matter | 5.89e-10 | 34 |
central nervous system | 2.87e-09 | 73 |
brain grey matter | 4.00e-09 | 29 |
regional part of telencephalon | 4.00e-09 | 29 |
telencephalon | 4.00e-09 | 29 |
nervous system | 3.74e-08 | 75 |