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FFCP PHASE1:Mm9::chr2:91023025..91023090,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:91023025..91023090,-
|DHSsupport=NA
|short_description=p1@Madd
|DPIdataset=NA
|description=CAGE_peak_1_at_Madd_5end
|association_with_transcript=0bp_to_ENSMUST00000099723,ENSMUST00000111376_5end
|EntrezGene=228355
|EntrezGene=228355
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2AGR0,A2AGQ6
|UniProt=A2AGR0,A2AGQ6
|association_with_transcript=0bp_to_ENSMUST00000099723,ENSMUST00000111376_5end
|cluster_id=chr2:91023025..91023090,-
|description=CAGE_peak_1_at_Madd_5end
|id=chr2:91023025..91023090,-
|ontology_enrichment_celltype=CL:0000540!1.50e-13!33;CL:0000047!1.50e-13!33;CL:0000031!1.50e-13!33;CL:0000404!1.50e-13!33;CL:0000117!1.53e-12!23;CL:0000337!1.53e-12!23;CL:0000393!1.72e-07!39;CL:0000211!1.72e-07!39;CL:0000221!5.05e-07!44;CL:0000133!5.05e-07!44;CL:0002319!6.98e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-13,33;CL:0000047,1.49e-13,33;CL:0000031,1.49e-13,33;CL:0000404,1.49e-13,33;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39;CL:0000221,5.23e-07,44;CL:0000133,5.23e-07,44;CL:0002319,7.23e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!6.22e-28!86;UBERON:0000153!6.93e-26!94;UBERON:0001017!1.32e-24!73;UBERON:0005743!1.32e-24!73;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0004121!8.14e-23!102;UBERON:0000924!8.14e-23!102;UBERON:0006601!8.14e-23!102;UBERON:0000073!1.05e-22!75;UBERON:0001016!1.05e-22!75;UBERON:0000033!1.44e-22!63;UBERON:0001049!2.51e-21!52;UBERON:0005068!2.51e-21!52;UBERON:0006241!2.51e-21!52;UBERON:0007135!2.51e-21!52;UBERON:0000955!6.94e-21!50;UBERON:0006238!6.94e-21!50;UBERON:0003056!2.46e-20!49;UBERON:0002616!3.05e-20!49;UBERON:0003080!9.83e-18!40;UBERON:0002780!3.59e-17!39;UBERON:0001890!3.59e-17!39;UBERON:0006240!3.59e-17!39;UBERON:0002020!4.44e-16!34;UBERON:0002791!1.01e-13!29;UBERON:0003528!1.01e-13!29;UBERON:0001893!1.01e-13!29;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002021!4.01e-08!10;UBERON:0000411!4.01e-08!10;UBERON:0001950!4.01e-08!10;UBERON:0002619!1.20e-07!17;UBERON:0000064!6.79e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-24,64;UBERON:0003075,1.04e-24,64;UBERON:0007284,1.04e-24,64;UBERON:0001017,1.40e-24,73;UBERON:0004121,2.95e-23,95;UBERON:0000924,2.95e-23,95;UBERON:0006601,2.95e-23,95;UBERON:0010371,3.62e-23,73;UBERON:0000073,8.78e-23,54;UBERON:0001016,1.10e-22,75;UBERON:0001049,2.66e-21,52;UBERON:0005068,2.66e-21,52;UBERON:0006241,2.66e-21,52;UBERON:0007135,2.66e-21,52;UBERON:0003056,2.45e-20,49;UBERON:0000955,6.48e-19,47;UBERON:0006238,6.48e-19,47;UBERON:0002616,2.75e-18,46;UBERON:0003080,9.80e-18,40;UBERON:0002780,3.58e-17,39;UBERON:0001890,3.58e-17,39;UBERON:0006240,3.58e-17,39;UBERON:0002020,4.43e-16,34;UBERON:0003528,1.01e-13,29;UBERON:0002791,1.01e-13,29;UBERON:0001893,1.01e-13,29;UBERON:0010314,1.78e-11,92;UBERON:0000956,2.18e-09,21;UBERON:0001869,2.18e-09,21;UBERON:0000203,2.18e-09,21;UBERON:0002021,4.01e-08,10;UBERON:0000411,4.01e-08,10;UBERON:0001950,4.01e-08,10;UBERON:0002619,1.20e-07,17;UBERON:0007811,5.99e-07,36
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87205,2.71814784818809,3.05707589244649,3.50647300600534,4.87655388779482,2.6175594198403,3.11075935900303,3.72803587852155,18.6018669765783,3.73791365109947,3.30916980914195,2.91676782516071,4.39143399824286,2.36538575687089,2.93393096614385,2.47388331203505,7.7595914875026,16.4277202161684,15.8416503441826,13.9044893076398,5.6763060281246,4.31386020092274,7.40548690973432,10.5625750443814,8.74197961037565,13.7022812452764,12.8489888641882,12.5198397935703,13.56481158459,14.6197968448419,15.9830924413194,12.5075394132428,17.0640277185091,2.49403421976732,0.665957860122194,0.0897138566094757,0.503653849092235,4.25017106870819,3.94133198447482,4.2124873581471,1.92931541171159,4.01257683228291,81.8890171794746,97.1286249030143,84.2156404755913,105.689707141368,89.7458100899541,95.1796310711023,102.603420035234,97.7197010996558,101.957042021446,110.282946403138,6.84996494055566,10.7736715818278,8.53668028770671,9.48116196566347,9.01336599300324,6.61836630420051,7.55638874525492,8.85950746127245,6.73930340142812,8.59170519996911,5.32306529769503,7.73367999682912,7.58496210506047,6.59459069770154,7.75378830900779,7.1444053692461,10.5454736609819,7.5234595980845,9.47797571847605,8.24313952752625,7.20025430009372,6.74408063405482,7.86839426826159,9.44751708110135,7.34053167239579,8.88453382862603,8.04883080640199,5.78753365163254,7.74083448921412,11.2228454331548,10.3212465768031,9.35792582567853,12.6861623382604,9.45114731234393,4.82266527452853,17.9863616115321,7.48581147025307,11.1732948105115,7.84282161482258,3.97064554415128,2.78241402744506
|phase1_expression=13.6126520039075,2.79180326111489,1.81999695755814,1.81478526784098,1.50268718983904,5.20425742926858,4.20502753071946,15.236552166106,48.0089542537184,41.1953566326709,12.4989116804619,9.97151987441705,16.2640693434645,17.3092396789615,4.33042690360362,3.84703008040669,2.79824751251259,7.25562980323947,6.7186072466812,10.1853516431527,21.7710822786739,6.55320277925843,4.96279599363977,3.67982572424835,4.12936705920906,2.29692785646008,0.430761996159075,1.50829862880122,1.33016393619462,2.26827116783938,3.99114919179548,3.17515336729816,1.23012957516914,0,2.59966457776147,2.49351968037739,1.22501613757421,1.67412652294763,3.1253413780952,4.71171369576418,3.52938892818609,5.46436387966757,5.34061388334269,0.125896817975577,0.608261587317087,0.367093504323363,0.782391344348039,4.36050312760893,2.19686182734472,1.74986909166855,2.79972843250725,1.43752564364972,10.2347389695219,38.4441935266013,44.0282876876628,0.771778308107841,0.85960031981627,0.515672092277442,49.1628999888823,56.0730438028355,61.4816461400994,0.677689064138264,1.77858959222228,4.94944844504769,6.92206453796882,8.5257613793532,3.89480143673926,4.2264013585371,26.4408511386618,34.021496459586,28.1835448210852,41.1337417541477,38.4311261255808,32.092589394318,29.7120960156533,40.4456266108409,68.271846219621,70.8664726372792,68.6621203655408,58.5575117522061,49.9522534069157,50.5285969440057,64.2120897703176,61.9038871034848,65.7032465440283,42.4265163082082,38.4403538157578,41.9398753106926,1.36307147999731,2.49386148352392,6.08715426273523,2.58127163094416,1.3599426674155,0,1.29955283489534,0.896053774194671,5.33688796500657,1.53387290320252,1.29893002301434,1.06001872353102,8.73229202615419,2.56652954828636,7.64415719119937,14.2213340630666,2.59789249213457,1.01343946190039,2.52762222507392,4.11061966988616,15.018397251536,9.50029690014878,6.07198643681475,5.1759131313064,6.22661842591358,4.06951129492081,5.76184664964954,4.77533047052767,5.93267922562497,2.16899035379867,4.42305275974937,2.42650274921114,4.19598885074748,3.87900202508178,5.59175283654366,66.7540217186328,83.778682725382,2.81002760729451,7.54835284387298,4.79922184794726,4.82866862877646,54.3740021039506,56.2725741466911,46.366455929647,83.4356736922927,100.49617473082,56.3105600756408,61.6516799657479,2.95334155165917,3.35898820647251,3.79084137650512,34.0915806536088,4.42409506073193,7.12696523743766,10.4436035287103,15.2211866014072,35.9913080510524,36.7686377217519,42.0720743273182,92.3571033538286,4.74249584452253,4.53854592402766,5.27853372491847,4.60311038097907,5.83899223373756,1.39300866608867,4.32142486456681,2.58744546864041,4.21327912387941,4.37491442095016,6.25159698670304,2.48550927042602,3.98694301967864,2.34080679899319,3.07768156260773,1.96764231747404,2.31400669331067,1.39520366850245,2.68273401399619,2.91913355917924,2.96207729844265,1.97000956894914,2.75633952455909,2.63159977365598,1.3173006917463,2.54992195644706,73.8117719460087,32.6207621242332,1.65209391491899,3.96675849995316,5.75878276445132,5.34144345279009,4.76809606891745,4.43703754171354,2.89091456998331,3.23383564391351,2.84717436926707,4.11747386810027,3.77002813200404,2.78539060857611,4.28920991662064,2.69645822596266,3.02593269824572,3.38540164532424,3.98302592001472,3.88444942873078,2.25415471346161,1.83286195060783,2.52138233317913,4.20814919341911,3.41477300470989,2.50937251565324,1.8839847340965,2.71473760627961,2.96452627087149,3.83743743147016,3.14494392181125,2.24862112384854,3.04290182082754,2.17059443777175,2.03700681425136,2.30156909960649,2.91843408195064,1.64736847912849,0,1.86070473834252,2.18426371180192,1.26289438973556,1.07638448113147,1.4473305640901,5.35784251483154,2.84237117655727,3.91115943460862,3.39490171550376,5.16318546234705,5.52770649557992,4.99891645860629,7.80534591431195,6.9359463406724,5.75808193086815,7.01600982092943,4.58817281204066,4.48980952851328,5.06271705035291,9.04747703635634,7.61467957346193,5.4094070032094,5.79467167239938,48.9679299462765,51.1042953542006,1.3114795630134,2.7771801992481,10.0962630213202,7.02789739733949,15.0796378412959,7.16906393857656,8.46634961513098,7.07691326972081,8.90583543684768,13.151513606009,12.6492088942888,67.1561551321577,6.10342366395555,4.45164009168138,4.56083486190013,4.94910368917606,3.98235415019888,6.79785781233948,3.32555912661226,3.96070667487386,5.61073596473468,3.68922177532713,6.71913562237375,6.18007340111759,4.9909632973861,5.37262488490887,5.27093042874994,3.09406629744561,33.703520969625,8.8229936075342,7.89087971074802,14.5749183821483,17.7340233642274,16.9450376721967,18.5940393280397,21.312546438022,0.938686832254841,2.33015277950202,4.19003956304428,2.63818004706368,6.78150592122803,4.76472106932431,4.77489376012546,5.25250879184196,4.66369338607761,39.4955893282386,4.27177201994632,4.54051109519089,3.33350149265481,2.26042148405629,6.15124024744613,4.80434163733698,9.17883521966819,8.6769900440668,10.0885980877229,1.90934123603023,6.16855187483214,4.87966721104437,4.32021363287205,2.71814784818809,3.05707589244649,3.50647300600534,4.87655388779482,2.6175594198403,3.11075935900303,3.72803587852155,18.6018669765783,3.73791365109947,3.30916980914195,2.91676782516071,4.39143399824286,2.36538575687089,2.93393096614385,2.47388331203505,7.7595914875026,16.4277202161684,15.8416503441826,13.9044893076398,5.6763060281246,4.31386020092274,7.40548690973432,10.5625750443814,8.74197961037565,13.7022812452764,12.8489888641882,12.5198397935703,13.56481158459,14.6197968448419,15.9830924413194,12.5075394132428,17.0640277185091,2.49403421976732,0.665957860122194,0.0897138566094757,0.503653849092235,4.25017106870819,3.94133198447482,4.2124873581471,1.92931541171159,4.01257683228291,81.8890171794746,97.1286249030143,84.2156404755913,105.689707141368,89.7458100899541,95.1796310711023,102.603420035234,97.7197010996558,101.957042021446,110.282946403138,6.84996494055566,10.7736715818278,8.53668028770671,9.48116196566347,9.01336599300324,6.61836630420051,7.55638874525492,8.85950746127245,6.73930340142812,8.59170519996911,5.32306529769503,7.73367999682912,7.58496210506047,6.59459069770154,7.75378830900779,7.1444053692461,10.5454736609819,7.5234595980845,9.47797571847605,8.24313952752625,7.20025430009372,6.74408063405482,7.86839426826159,9.44751708110135,7.34053167239579,8.88453382862603,8.04883080640199,5.78753365163254,7.74083448921412,11.2228454331548,10.3212465768031,9.35792582567853,12.6861623382604,9.45114731234393,4.82266527452853,17.9863616115321,7.48581147025307,11.1732948105115,7.84282161482258,3.97064554415128,2.78241402744506
|short_description=p1@Madd
}}
}}

Latest revision as of 02:47, 27 September 2015

Short description:p1@Madd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Madd_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000099723, ENSMUST00000111376_5end
EntrezGene:Madd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Madd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E748.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F241.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I938.44
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C349.16
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C761.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D538.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D768.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D458.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F449.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D850.53
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E464.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E561.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I665.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.44
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.94
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D79.50
adrenal gland, embryo E14.CNhs11038.406-44C56.07
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B266.75
cerebellum, neonate N30.CNhs11135.1395-42I283.78
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A454.37
corpus striatum, adult.CNhs10487.19-21D856.27
corpus striatum, neonate N00.CNhs11226.630-43F146.37
cortex, adult.CNhs10473.12-14D583.44
cortex, neonate N30.CNhs11107.1392-42F2100.50
diencephalon, adult.CNhs10482.20-12F256.31
diencephalon, neonate N30.CNhs11201.1388-42B261.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G434.09
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C635.99
eyeball, neonate N01.CNhs11140.1532-43E736.77
eyeball, neonate N02.CNhs11205.1551-44G842.07
eyeball, neonate N16.CNhs11188.777-19A292.36
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E873.81
hippocampus, neonate N00.CNhs11228.627-43G132.62
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C248.97
medulla oblongata, neonate N30.CNhs11200.1396-42A351.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I967.16
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B917.73
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F518.59
pituitary gland, neonate N00.CNhs11190.1308-22E921.31
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C939.50
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.09
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.17
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G518.60
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D97.76
testis, neonate N20.CNhs11110.839-18H316.43
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B513.90
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F813.70
thymus, neonate N03.CNhs11137.2104-43C712.85
thymus, neonate N06.CNhs11197.681-26C412.52
thymus, neonate N07.CNhs11211.713-19D313.56
thymus, neonate N10.CNhs11194.748-24E414.62
thymus, neonate N20.CNhs11186.820-7A215.98
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G217.06
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A297.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A384.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7105.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A489.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A595.18
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6102.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A797.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8101.96
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9110.28
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I517.99
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.49e-1333
neuronal stem cell1.49e-1333
neuroblast1.49e-1333
electrically signaling cell1.49e-1333
CNS neuron (sensu Vertebrata)1.52e-1223
neuroblast (sensu Vertebrata)1.52e-1223
electrically responsive cell1.77e-0739
electrically active cell1.77e-0739
ectodermal cell5.23e-0744
neurectodermal cell5.23e-0744
neural cell7.23e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm1.04e-2464
neural plate1.04e-2464
presumptive neural plate1.04e-2464
central nervous system1.40e-2473
ectoderm-derived structure2.95e-2395
ectoderm2.95e-2395
presumptive ectoderm2.95e-2395
ecto-epithelium3.62e-2373
regional part of nervous system8.78e-2354
nervous system1.10e-2275
neural tube2.66e-2152
neural rod2.66e-2152
future spinal cord2.66e-2152
neural keel2.66e-2152
pre-chordal neural plate2.45e-2049
brain6.48e-1947
future brain6.48e-1947
regional part of brain2.75e-1846
anterior neural tube9.80e-1840
regional part of forebrain3.58e-1739
forebrain3.58e-1739
future forebrain3.58e-1739
gray matter4.43e-1634
brain grey matter1.01e-1329
regional part of telencephalon1.01e-1329
telencephalon1.01e-1329
structure with developmental contribution from neural crest1.78e-1192
cerebral cortex2.18e-0921
cerebral hemisphere2.18e-0921
pallium2.18e-0921
occipital lobe4.01e-0810
visual cortex4.01e-0810
neocortex4.01e-0810
regional part of cerebral cortex1.20e-0717
craniocervical region5.99e-0736
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