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FFCP PHASE1:Mm9::chr7:85723194..85723286,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:85723194..85723286,-
|DHSsupport=NA
|short_description=p1@Ntrk3
|DPIdataset=NA
|description=CAGE_peak_1_at_Ntrk3_5end
|association_with_transcript=7bp_to_ENSMUST00000039431_5end
|EntrezGene=18213
|EntrezGene=18213
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q6VNS1
|UniProt=Q6VNS1
|association_with_transcript=7bp_to_ENSMUST00000039431_5end
|cluster_id=chr7:85723194..85723286,-
|description=CAGE_peak_1_at_Ntrk3_5end
|id=chr7:85723194..85723286,-
|ontology_enrichment_celltype=CL:0000117!4.27e-10!23;CL:0000337!4.27e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-10,23;CL:0000337,3.69e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.18e-22!52;UBERON:0005068!3.18e-22!52;UBERON:0006241!3.18e-22!52;UBERON:0007135!3.18e-22!52;UBERON:0004121!4.14e-22!102;UBERON:0000924!4.14e-22!102;UBERON:0006601!4.14e-22!102;UBERON:0000955!3.56e-21!50;UBERON:0006238!3.56e-21!50;UBERON:0002346!1.62e-20!71;UBERON:0003075!1.62e-20!71;UBERON:0007284!1.62e-20!71;UBERON:0002616!1.64e-20!49;UBERON:0001017!1.82e-20!73;UBERON:0005743!1.82e-20!73;UBERON:0000033!1.17e-19!63;UBERON:0000073!2.63e-19!75;UBERON:0001016!2.63e-19!75;UBERON:0003080!1.30e-16!40;UBERON:0002780!5.12e-16!39;UBERON:0001890!5.12e-16!39;UBERON:0006240!5.12e-16!39;UBERON:0003056!1.82e-15!49;UBERON:0002020!3.05e-15!34;UBERON:0002791!1.29e-12!29;UBERON:0003528!1.29e-12!29;UBERON:0001893!1.29e-12!29;UBERON:0007811!1.22e-10!86;UBERON:0000153!5.41e-10!94;UBERON:0000956!6.87e-10!21;UBERON:0001869!6.87e-10!21;UBERON:0000203!6.87e-10!21;UBERON:0000468!1.74e-09!333;UBERON:0000025!1.92e-08!114;UBERON:0004111!2.89e-08!122;UBERON:0002619!3.51e-08!17;UBERON:0000479!5.46e-08!349;UBERON:0002021!7.84e-08!10;UBERON:0000411!7.84e-08!10;UBERON:0001950!7.84e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-23,54;UBERON:0001049,2.23e-22,52;UBERON:0005068,2.23e-22,52;UBERON:0006241,2.23e-22,52;UBERON:0007135,2.23e-22,52;UBERON:0010371,5.15e-21,73;UBERON:0004121,1.09e-20,95;UBERON:0000924,1.09e-20,95;UBERON:0006601,1.09e-20,95;UBERON:0001017,2.03e-20,73;UBERON:0000955,1.30e-19,47;UBERON:0006238,1.30e-19,47;UBERON:0002346,1.41e-19,64;UBERON:0003075,1.41e-19,64;UBERON:0007284,1.41e-19,64;UBERON:0001016,2.94e-19,75;UBERON:0002616,5.90e-19,46;UBERON:0010314,7.32e-17,92;UBERON:0003080,1.01e-16,40;UBERON:0002780,3.99e-16,39;UBERON:0001890,3.99e-16,39;UBERON:0006240,3.99e-16,39;UBERON:0003056,1.44e-15,49;UBERON:0002020,2.41e-15,34;UBERON:0003528,1.07e-12,29;UBERON:0002791,1.07e-12,29;UBERON:0001893,1.07e-12,29;UBERON:0000956,5.95e-10,21;UBERON:0001869,5.95e-10,21;UBERON:0000203,5.95e-10,21;UBERON:0002619,3.13e-08,17;UBERON:0000025,4.92e-08,114;UBERON:0002021,7.03e-08,10;UBERON:0000411,7.03e-08,10;UBERON:0001950,7.03e-08,10;UBERON:0004111,7.17e-08,122;UBERON:0000479,4.31e-07,349
|phase1_expression=7.68714466103011,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.563154888606667,2.34064526321993,0,0.159544317990673,0.513602189793617,0.34968160967599,0,0,0,0,0,0,27.5540260089466,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,31.6963362030877,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,35.9900018400098,2.18025156380447,2.85592037554813,1.1665793944457,5.87942970826523,5.75010257459886,0,2.17608642603403,0.672187598284928,13.8920095459411,1.43266719969378,6.70373719960675,29.9428362072205,39.1453324661304,32.3254015788151,1.69422266034566,11.5608323494448,0,0.988866362566974,0.7104801149461,9.28760342607055,6.53171119046643,35.9802954710417,40.3667755611755,27.552569937031,47.7037143954352,37.3267834208227,36.0122949691965,25.1115134067779,43.203282970671,50.6533052597188,43.7967569632194,42.0881901122107,22.0250100509424,11.9848813119157,22.3992749339407,32.1060448851588,42.7699583624077,53.0209919785531,68.6484604153646,67.4841766987748,39.3302830691384,1.13589289999776,2.64500460373749,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0,4.91555470461132,0,0,0,6.4787973097273,0,0,0,0,0,0,3.31133251185274,4.14300613835475,12.3206975423805,27.2371963022833,27.7063585264048,15.4512383161559,11.6056433225519,18.2262496060342,15.4569907335501,3.95511948374998,323.034963359083,0,5.17653919831709,2.42925670306433,1.93950101254089,1.86391761218122,205.532119502106,189.13037625255,0.766371165625774,0,0,0.127070227073065,62.7622779106207,141.825186873774,39.5811209155523,105.33753803652,89.5004100656157,44.0510654466267,67.4923654361872,53.0583085660148,6.46916247172484,5.81262344397452,24.411255282831,1.17108398666433,1.83921683546778,9.90341713929421,15.8240058727501,13.4031903328116,12.5551445879153,10.1197862524507,29.2334808935088,0,1.89106080167819,8.62160508403349,8.54863356467542,15.8486932058591,15.3230953269753,14.8163138213719,7.16523360546575,0,0,0,5.17814431338755,5.62862543954631,5.04173772090842,7.33908680314152,3.93528463494808,10.0273623376796,3.25547522650571,8.31647544338819,4.78737903705395,8.06343264576054,15.2675741593559,7.05298643048945,6.87139940899062,7.46470391989572,3.35516046900929,149.726443377659,74.4000347502226,0,2.11560453330835,14.7168892869311,9.0572302025571,19.2012517369919,14.117846723634,15.3440850252961,11.4135375667535,1.89811624617805,13.3406153326449,7.28872105520782,9.15199771389294,10.1381325301942,4.49409704327111,3.02593269824572,3.18626037206988,10.4317345524195,15.4235492023134,16.9061603509621,8.14605311381257,9.11576689687841,6.52263124979963,5.6280518040589,4.72352473534727,5.49495547444812,2.09775178667061,0.296452627087149,4.00428253718626,3.34150291692445,1.79889689907883,3.24576194221605,0.964708639009667,2.29163266603278,2.01387296215567,1.45921704097532,2.47105271869273,12.9391385874619,3.72140947668503,2.49630138491648,1.76805214562978,1.07638448113147,1.4473305640901,3.51031061316549,9.47457058852424,6.02970412835496,5.43184274480602,5.39787571063555,7.70528784232352,8.80761471278251,6.04914308359176,17.8127712839996,16.1669223443606,22.1642128433907,11.7981586595331,9.15230403889247,5.49666422609744,0,0,20.6540994667995,48.2889306033282,51.697289976069,41.4929370536399,0,3.28212205365685,2.83957397474631,2.34263246577983,4.09304455692318,8.12493913038677,7.12955757063661,5.37845408498782,0.809621403349789,3.50707029493574,4.34816555741176,93.8258243951677,10.6455063906201,20.6556100254016,22.1526264720863,21.9410263553472,1.32745138339963,2.42780636154981,1.51161778482376,3.77210159511796,8.56375489354241,16.6014979889721,10.3371317267288,15.6319503675327,8.19943970284859,8.53299246426703,0,3.09406629744561,24.5116516142727,12.4242154881604,19.9212373025442,21.8623775732224,41.6749549059343,36.5656076084245,35.7071374706602,45.0608124689607,0,0.63549621259146,7.05690873775878,25.3924829529879,16.7923003763742,21.2301495747109,18.6220856644893,19.3686261699172,7.57850175237612,44.1312218785013,1.36696704638282,5.15967169908056,7.77817014952789,1.31857919903284,1.36694227721025,0.686334519619568,0,0,0,3.81868247206045,1.73984796469624,17.8921131071627,14.2567049884778,19.2361232333311,16.8139174084557,14.0258920240214,12.6459787259764,3.92633912976044,2.46268449254406,31.6883049674332,0.56369293868419,3.88743019714345,3.64008679005615,6.61134040369762,8.26622870257479,7.7719817725758,10.5621514781179,13.4110516389269,4.50895181030557,1.44950472495604,0.864090018773596,6.00421129193539,14.798940716182,10.681939545142,2.46849563657811,7.51912121803422,4.96703386953162,4.68762253127878,3.10148007066612,4.54349024766664,3.73413352609499,5.44461399738939,4.87289403698762,4.42574471545516,3.74006086981021,5.8949899739955,0,0,0,5.21611903886914,1.87682475451182,4.57879060668163,6.21668299329291,3.00943262421218,94.8783095596672,104.493828687129,107.131461013167,93.8318375596534,97.2817178074312,115.575266300624,89.1029700305984,97.2693798964316,131.411298605419,107.694144844379,6.74617759297148,19.15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|phase1_expression=7.68714466103011,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.563154888606667,2.34064526321993,0,0.159544317990673,0.513602189793617,0.34968160967599,0,0,0,0,0,0,27.5540260089466,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,31.6963362030877,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,35.9900018400098,2.18025156380447,2.85592037554813,1.1665793944457,5.87942970826523,5.75010257459886,0,2.17608642603403,0.672187598284928,13.8920095459411,1.43266719969378,6.70373719960675,29.9428362072205,39.1453324661304,32.3254015788151,1.69422266034566,11.5608323494448,0,0.988866362566974,0.7104801149461,9.28760342607055,6.53171119046643,35.9802954710417,40.3667755611755,27.552569937031,47.7037143954352,37.3267834208227,36.0122949691965,25.1115134067779,43.203282970671,50.6533052597188,43.7967569632194,42.0881901122107,22.0250100509424,11.9848813119157,22.3992749339407,32.1060448851588,42.7699583624077,53.0209919785531,68.6484604153646,67.4841766987748,39.3302830691384,1.13589289999776,2.64500460373749,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0,4.91555470461132,0,0,0,6.4787973097273,0,0,0,0,0,0,3.31133251185274,4.14300613835475,12.3206975423805,27.2371963022833,27.7063585264048,15.4512383161559,11.6056433225519,18.2262496060342,15.4569907335501,3.95511948374998,323.034963359083,0,5.17653919831709,2.42925670306433,1.93950101254089,1.86391761218122,205.532119502106,189.13037625255,0.766371165625774,0,0,0.127070227073065,62.7622779106207,141.825186873774,39.5811209155523,105.33753803652,89.5004100656157,44.0510654466267,67.4923654361872,53.0583085660148,6.46916247172484,5.81262344397452,24.411255282831,1.17108398666433,1.83921683546778,9.90341713929421,15.8240058727501,13.4031903328116,12.5551445879153,10.1197862524507,29.2334808935088,0,1.89106080167819,8.62160508403349,8.54863356467542,15.8486932058591,15.3230953269753,14.8163138213719,7.16523360546575,0,0,0,5.17814431338755,5.62862543954631,5.04173772090842,7.33908680314152,3.93528463494808,10.0273623376796,3.25547522650571,8.31647544338819,4.78737903705395,8.06343264576054,15.2675741593559,7.05298643048945,6.87139940899062,7.46470391989572,3.35516046900929,149.726443377659,74.4000347502226,0,2.11560453330835,14.7168892869311,9.0572302025571,19.2012517369919,14.117846723634,15.3440850252961,11.4135375667535,1.89811624617805,13.3406153326449,7.28872105520782,9.15199771389294,10.1381325301942,4.49409704327111,3.02593269824572,3.18626037206988,10.4317345524195,15.4235492023134,16.9061603509621,8.14605311381257,9.11576689687841,6.52263124979963,5.6280518040589,4.72352473534727,5.49495547444812,2.09775178667061,0.296452627087149,4.00428253718626,3.34150291692445,1.79889689907883,3.24576194221605,0.964708639009667,2.29163266603278,2.01387296215567,1.45921704097532,2.47105271869273,12.9391385874619,3.72140947668503,2.49630138491648,1.76805214562978,1.07638448113147,1.4473305640901,3.51031061316549,9.47457058852424,6.02970412835496,5.43184274480602,5.39787571063555,7.70528784232352,8.80761471278251,6.04914308359176,17.8127712839996,16.1669223443606,22.1642128433907,11.7981586595331,9.15230403889247,5.49666422609744,0,0,20.6540994667995,48.2889306033282,51.697289976069,41.4929370536399,0,3.28212205365685,2.83957397474631,2.34263246577983,4.09304455692318,8.12493913038677,7.12955757063661,5.37845408498782,0.809621403349789,3.50707029493574,4.34816555741176,93.8258243951677,10.6455063906201,20.6556100254016,22.1526264720863,21.9410263553472,1.32745138339963,2.42780636154981,1.51161778482376,3.77210159511796,8.56375489354241,16.6014979889721,10.3371317267288,15.6319503675327,8.19943970284859,8.53299246426703,0,3.09406629744561,24.5116516142727,12.4242154881604,19.9212373025442,21.8623775732224,41.6749549059343,36.5656076084245,35.7071374706602,45.0608124689607,0,0.63549621259146,7.05690873775878,25.3924829529879,16.7923003763742,21.2301495747109,18.6220856644893,19.3686261699172,7.57850175237612,44.1312218785013,1.36696704638282,5.15967169908056,7.77817014952789,1.31857919903284,1.36694227721025,0.686334519619568,0,0,0,3.81868247206045,1.73984796469624,17.8921131071627,14.2567049884778,19.2361232333311,16.8139174084557,14.0258920240214,12.6459787259764,3.92633912976044,2.46268449254406,31.6883049674332,0.56369293868419,3.88743019714345,3.64008679005615,6.61134040369762,8.26622870257479,7.7719817725758,10.5621514781179,13.4110516389269,4.50895181030557,1.44950472495604,0.864090018773596,6.00421129193539,14.798940716182,10.681939545142,2.46849563657811,7.51912121803422,4.96703386953162,4.68762253127878,3.10148007066612,4.54349024766664,3.73413352609499,5.44461399738939,4.87289403698762,4.42574471545516,3.74006086981021,5.8949899739955,0,0,0,5.21611903886914,1.87682475451182,4.57879060668163,6.21668299329291,3.00943262421218,94.8783095596672,104.493828687129,107.131461013167,93.8318375596534,97.2817178074312,115.575266300624,89.1029700305984,97.2693798964316,131.411298605419,107.694144844379,6.74617759297148,19.1531939232495,21.683167930775,31.8469799359465,14.2536950587028,12.685202083051,38.8931773652827,34.6138896161342,43.3240932948951,31.8398486822385,40.3032086825481,44.7044429085001,34.5537162563866,34.8937080606538,37.6202321659267,34.2931457723813,26.7692792932616,22.9561972351809,26.3734976514116,31.7949667490298,37.3727485100103,31.9456451086807,26.9432894640473,35.7552184915528,31.0560955370591,31.9843217830537,29.6343316053892,26.83311056666,29.3336885907061,39.2799590160417,25.9810689691941,26.5962102414021,29.4646351082176,31.1423050783792,36.6522560864169,40.4693136259472,26.6682033627766,23.8506869993611,22.1894465199858,21.6179590737125,23.4186513976626
|short_description=p1@Ntrk3
}}
}}

Latest revision as of 02:39, 27 September 2015

Short description:p1@Ntrk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ntrk3_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 7bp_to_ENSMUST00000039431_5end
EntrezGene:Ntrk3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ntrk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B735.99
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C329.94
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F540.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I653.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D668.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F667.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.33
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C527.24
adrenal gland, embryo E16.CNhs11004.1254-43D627.71
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C118.23
adrenal gland, neonate N25.CNhs11223.1377-27I315.46
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H1323.03
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2205.53
cerebellum, neonate N30.CNhs11135.1395-42I2189.13
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A462.76
corpus striatum, adult.CNhs10487.19-21D8141.83
corpus striatum, neonate N00.CNhs11226.630-43F139.58
cortex, adult.CNhs10473.12-14D5105.34
cortex, neonate N30.CNhs11107.1392-42F289.50
diencephalon, adult.CNhs10482.20-12F244.05
diencephalon, neonate N30.CNhs11201.1388-42B267.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B153.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G424.41
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D415.82
eyeball, neonate N00.CNhs11207.633-15C613.40
eyeball, neonate N01.CNhs11140.1532-43E712.56
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A229.23
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G17.05
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E8149.73
hippocampus, neonate N00.CNhs11228.627-43G174.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I514.72
intestine, embryo E13.CNhs11010.381-16D59.06
intestine, embryo E15.CNhs10602.976-16D819.20
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F815.42
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G29.47
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A316.17
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A411.80
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H248.29
medulla oblongata, adult.CNhs10477.17-12C251.70
medulla oblongata, neonate N30.CNhs11200.1396-42A341.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I993.83
ovary, adult.CNhs10507.91-2I710.65
ovary, embryo E18.CNhs11040.505-44H720.66
ovary, neonate N00.CNhs11217.1299-22I422.15
oviduct, adult pregnant day01.CNhs10500.988-6G621.94
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E612.42
pituitary gland, embryo E13.CNhs11009.370-44C719.92
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B941.67
pituitary gland, embryo E16.CNhs11036.449-43F636.57
pituitary gland, embryo E17.CNhs11039.1265-44F535.71
pituitary gland, neonate N00.CNhs11190.1308-22E945.06
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C325.39
skin, neonate N00.CNhs11124.650-25G416.79
skin, neonate N03.CNhs11215.662-22H321.23
skin, neonate N06.CNhs11097.693-20I518.62
skin, neonate N10.CNhs11108.762-6C419.37
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C944.13
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G817.89
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D519.24
stomach, embryo E18.CNhs10999.1286-20C616.81
stomach, neonate N03.CNhs11193.1340-24B814.03
stomach, neonate N07.CNhs11210.718-18A912.65
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C131.69
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B710.56
testis, neonate N07.CNhs11222.726-26I413.41
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A194.88
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2104.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3107.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D793.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A497.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5115.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A689.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A797.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8131.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9107.69
whole body, embryo E11.CNhs11014.324-5I86.75
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H221.68
whole body, embryo E14.5.CNhs10578.420-27D231.85
whole body, embryo E14.CNhs10519.395-14B114.25
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G543.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G544.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G529.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.28
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.14
whole body, embryo E17.5.CNhs10513.490-9F936.65
whole body, embryo E17.CNhs10517.475-3I540.47
whole body, embryo E18.CNhs10516.493-3B326.67
whole body, neonate N00.CNhs10525.657-19C223.85
whole body, neonate N01.CNhs10576.659-23C622.19
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B423.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.69e-1023
neuroblast (sensu Vertebrata)3.69e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.52e-2354
neural tube2.23e-2252
neural rod2.23e-2252
future spinal cord2.23e-2252
neural keel2.23e-2252
ecto-epithelium5.15e-2173
ectoderm-derived structure1.09e-2095
ectoderm1.09e-2095
presumptive ectoderm1.09e-2095
central nervous system2.03e-2073
brain1.30e-1947
future brain1.30e-1947
neurectoderm1.41e-1964
neural plate1.41e-1964
presumptive neural plate1.41e-1964
nervous system2.94e-1975
regional part of brain5.90e-1946
structure with developmental contribution from neural crest7.32e-1792
anterior neural tube1.01e-1640
regional part of forebrain3.99e-1639
forebrain3.99e-1639
future forebrain3.99e-1639
pre-chordal neural plate1.44e-1549
gray matter2.41e-1534
brain grey matter1.07e-1229
regional part of telencephalon1.07e-1229
telencephalon1.07e-1229
cerebral cortex5.95e-1021
cerebral hemisphere5.95e-1021
pallium5.95e-1021
regional part of cerebral cortex3.13e-0817
tube4.92e-08114
occipital lobe7.03e-0810
visual cortex7.03e-0810
neocortex7.03e-0810
anatomical conduit7.17e-08122
tissue4.31e-07349
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