FFCP PHASE1:Mm9::chr2:90805225..90805237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13046 | |EntrezGene=13046 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3364 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENSMUST00000133657_5end | |association_with_transcript=-11bp_to_ENSMUST00000133657_5end | ||
|cluster_id=chr2:90805225..90805237,+ | |||
|description=CAGE_peak_4_at_Celf1_5end | |description=CAGE_peak_4_at_Celf1_5end | ||
|id=chr2:90805225..90805237,+ | |id=chr2:90805225..90805237,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.73e-10!18;UBERON:0000948!5.73e-10!18;UBERON:0005498!5.73e-10!18;UBERON:0004140!5.73e-10!18;UBERON:0009881!5.73e-10!18;UBERON:0004141!5.73e-10!18;UBERON:0003084!5.73e-10!18;UBERON:0007005!5.73e-10!18;UBERON:0004139!5.73e-10!18;UBERON:0004291!5.73e-10!18;UBERON:0004535!4.12e-09!23;UBERON:0001009!4.12e-09!23;UBERON:0002021!9.70e-08!10;UBERON:0000411!9.70e-08!10;UBERON:0001950!9.70e-08!10;UBERON:0004872!6.05e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.87e-15,18;UBERON:0000948,5.87e-15,18;UBERON:0005498,5.87e-15,18;UBERON:0004140,5.87e-15,18;UBERON:0009881,5.87e-15,18;UBERON:0004141,5.87e-15,18;UBERON:0003084,5.87e-15,18;UBERON:0007005,5.87e-15,18;UBERON:0004139,5.87e-15,18;UBERON:0004291,5.87e-15,18;UBERON:0002021,3.74e-13,10;UBERON:0000411,3.74e-13,10;UBERON:0001950,3.74e-13,10;UBERON:0004535,3.70e-11,23;UBERON:0001009,3.70e-11,23;UBERON:0010314,3.06e-10,92;UBERON:0002619,5.79e-09,17;UBERON:0004111,9.60e-09,122;UBERON:0000956,1.19e-08,21;UBERON:0001869,1.19e-08,21;UBERON:0000203,1.19e-08,21;UBERON:0003528,1.44e-08,29;UBERON:0002791,1.44e-08,29;UBERON:0001893,1.44e-08,29;UBERON:0000025,4.68e-08,114;UBERON:0000955,2.22e-07,47;UBERON:0006238,2.22e-07,47;UBERON:0004872,4.83e-07,33;UBERON:0002020,5.96e-07,34;UBERON:0003103,7.60e-07,43;UBERON:0002780,7.90e-07,39;UBERON:0001890,7.90e-07,39;UBERON:0006240,7.90e-07,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.494389935468748,0.144599356919912,1.76922110389975,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,1.67557365450764,0,0,0,0,0.149790639404823,3.20250421973039,1.25654352112864,1.56441888173049,0.767146371990992,0.83115217823824,1.29793010454206,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.512454881139399,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,2.27838349789052,5.8631514995274,3.42117916775928,4.02466050494857,4.32881309844288,4.47374627373397,4.18561100550734,2.68273401399619,1.98501082024188,1.81015834904829,1.31333971263276,0.810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,1.05144974282064,0,0,0,0,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.568474235311454,0.651859905768103,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0.518054945597687,0,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0,3.13443233647817,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.609958401380546,0.86404272657441,1.46361807210128,1.52853794622324,1.21377911746339,1.81837602595739,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.576060012515731,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,1.15913756419314,1.50145980360946,2.56412273974171,0.857473516316263,1.50471631210609,1.6942555278512,1.84130094602871,2.29158205375759,1.89038500578056,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0,0.701794825336225,0,0.191288332068843,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.494389935468748,0.144599356919912,1.76922110389975,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,1.67557365450764,0,0,0,0,0.149790639404823,3.20250421973039,1.25654352112864,1.56441888173049,0.767146371990992,0.83115217823824,1.29793010454206,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.512454881139399,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,2.27838349789052,5.8631514995274,3.42117916775928,4.02466050494857,4.32881309844288,4.47374627373397,4.18561100550734,2.68273401399619,1.98501082024188,1.81015834904829,1.31333971263276,0.810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,1.05144974282064,0,0,0,0,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.568474235311454,0.651859905768103,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0.518054945597687,0,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0,3.13443233647817,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.609958401380546,0.86404272657441,1.46361807210128,1.52853794622324,1.21377911746339,1.81837602595739,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.576060012515731,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,1.15913756419314,1.50145980360946,2.56412273974171,0.857473516316263,1.50471631210609,1.6942555278512,1.84130094602871,2.29158205375759,1.89038500578056,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0,0.701794825336225,0,0.191288332068843,0.220591419119515,0.927471342481686 | ||
|short_description=p4@Celf1 | |short_description=p4@Celf1 | ||
}} | }} |
Latest revision as of 02:32, 27 September 2015
Short description: | p4@Celf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Celf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3364 |
Association with transcript: | -11bp_to_ENSMUST00000133657_5end |
EntrezGene: | Celf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.87e-15 | 18 |
heart | 5.87e-15 | 18 |
primitive heart tube | 5.87e-15 | 18 |
primary heart field | 5.87e-15 | 18 |
anterior lateral plate mesoderm | 5.87e-15 | 18 |
heart tube | 5.87e-15 | 18 |
heart primordium | 5.87e-15 | 18 |
cardiac mesoderm | 5.87e-15 | 18 |
cardiogenic plate | 5.87e-15 | 18 |
heart rudiment | 5.87e-15 | 18 |
occipital lobe | 3.74e-13 | 10 |
visual cortex | 3.74e-13 | 10 |
neocortex | 3.74e-13 | 10 |
cardiovascular system | 3.70e-11 | 23 |
circulatory system | 3.70e-11 | 23 |
structure with developmental contribution from neural crest | 3.06e-10 | 92 |
regional part of cerebral cortex | 5.79e-09 | 17 |
anatomical conduit | 9.60e-09 | 122 |
cerebral cortex | 1.19e-08 | 21 |
cerebral hemisphere | 1.19e-08 | 21 |
pallium | 1.19e-08 | 21 |
brain grey matter | 1.44e-08 | 29 |
regional part of telencephalon | 1.44e-08 | 29 |
telencephalon | 1.44e-08 | 29 |
tube | 4.68e-08 | 114 |
brain | 2.22e-07 | 47 |
future brain | 2.22e-07 | 47 |
splanchnic layer of lateral plate mesoderm | 4.83e-07 | 33 |
gray matter | 5.96e-07 | 34 |
compound organ | 7.60e-07 | 43 |
regional part of forebrain | 7.90e-07 | 39 |
forebrain | 7.90e-07 | 39 |
future forebrain | 7.90e-07 | 39 |