FFCP PHASE1:Mm9::chr18:21159747..21159767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56515 | |EntrezGene=56515 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQE0,G3UWD0 | |UniProt=Q9CQE0,G3UWD0 | ||
|association_with_transcript=-74bp_to_ENSMUST00000052396,ENSMUST00000072847,ENSMUST00000167653,NM_019706,NM_207623,uc008efb.1,uc008efc.1,uc012bae.1_5end | |association_with_transcript=-74bp_to_ENSMUST00000052396,ENSMUST00000072847,ENSMUST00000167653,NM_019706,NM_207623,uc008efb.1,uc008efc.1,uc012bae.1_5end | ||
|cluster_id=chr18:21159747..21159767,+ | |||
|description=CAGE_peak_5_at_Rnf138_5end | |description=CAGE_peak_5_at_Rnf138_5end | ||
|id=chr18:21159747..21159767,+ | |id=chr18:21159747..21159767,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-14,23;CL:0000337,4.82e-14,23;CL:0000540,9.83e-10,33;CL:0000047,9.83e-10,33;CL:0000031,9.83e-10,33;CL:0000404,9.83e-10,33;CL:0000393,1.37e-07,39;CL:0000211,1.37e-07,39;CL:0002319,1.76e-07,43;CL:0002609,2.68e-07,6;CL:0000221,3.26e-07,44;CL:0000133,3.26e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.90e-09,34 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.319088635981346,1.36960583944965,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.788655413395594,0.548457734422955,0,9.18467533631554,1.48936426801328,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0.279972843250725,1.43752564364972,0.503347818173209,1.45072428402269,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.89008313664367,2.3135745748652,1.42825492201902,0.220868540951614,1.34739879136449,0.575072826109418,4.5960939330501,0,0,0,1.84640802822271,1.64677758484337,2.08365348222704,0,0.56276261003168,0,2.65165726926301,1.85083185038834,1.86399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,0,0.505524445014783,1.48439043634778,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.599075622529601,0.599902730993408,0.254140454146129,0.449371918214468,0,1.50785222535437,0,0.767146371990992,0.20778804455956,0.324482526135515,0.81471491080253,0,0.505445516867349,0,1.04096354370163,1.83921683546778,0.180062129805349,0.753524089178575,0.204109497453984,0.512454881139399,0.468508622798644,0.258703370739016,1.29340795759705,1.51284864134255,1.40760899331159,0.657587197282725,0.834141747676794,0,0.411564272815887,0.59710280045548,0,1.02939162845886,2.55747149456033,0.828503090142008,0.469052119962192,1.08037236876609,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,0.630869845692382,1.74937841044784,0,0,1.06644125267617,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0,0,0,0,1.13800740571849,0.913988100877831,0,1.01825663922657,0.775809948670503,0.49095073923223,0.442655759869801,0,0,0,0,0.500535317148282,0.196558995113203,0.449724224769707,0,0.482354319504834,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,0,0.963963949265421,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0.776152102696527,0.643011105094777,1.59606210278046,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.164140899745061,0,0.18542530201051,0.512612642393558,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0.679913719975421,0.419854356970974,0.552799895217695,0,2.05618395827738,1.21991680276109,0.216010681643603,0.418176592028937,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,56.369293868419,0.897099276263873,0.992750942742586,0.777804753376191,0.129159823477731,0.337912250981556,0.352071715937262,0.651021924219751,1.99232754408851,1.93267296660805,16.4177103566983,1.26404448251271,0.405450430580328,0.924398614483445,0.649604114888975,0.716106782669926,0.79472541912506,1.08175904567972,0.443068581523732,0.403865799792591,0.685861259894999,1.91569751759997,1.55932609183604,0.962118416403295,0.701261413089414,0,0.665957860122194,1.34570784914214,0.335769232728157,0.386379188064381,0,0,0,1.00314420807073,0,0,0,1.03111909406213,0,0.755393897389701,0,0.45032120322422,0,1.03552062350364,1.24544817101012,1.99512436700516,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,1.13175804831646,0.187283014939765,0.576226371643824,0.287177344778066,1.42888107384922,0.463537303779422,0,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.619747364743864,0.385813221962283,1.74867404556562,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.319088635981346,1.36960583944965,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.788655413395594,0.548457734422955,0,9.18467533631554,1.48936426801328,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0.279972843250725,1.43752564364972,0.503347818173209,1.45072428402269,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.89008313664367,2.3135745748652,1.42825492201902,0.220868540951614,1.34739879136449,0.575072826109418,4.5960939330501,0,0,0,1.84640802822271,1.64677758484337,2.08365348222704,0,0.56276261003168,0,2.65165726926301,1.85083185038834,1.86399445825301,0.075726193333184,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,0,0.505524445014783,1.48439043634778,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.599075622529601,0.599902730993408,0.254140454146129,0.449371918214468,0,1.50785222535437,0,0.767146371990992,0.20778804455956,0.324482526135515,0.81471491080253,0,0.505445516867349,0,1.04096354370163,1.83921683546778,0.180062129805349,0.753524089178575,0.204109497453984,0.512454881139399,0.468508622798644,0.258703370739016,1.29340795759705,1.51284864134255,1.40760899331159,0.657587197282725,0.834141747676794,0,0.411564272815887,0.59710280045548,0,1.02939162845886,2.55747149456033,0.828503090142008,0.469052119962192,1.08037236876609,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,0.630869845692382,1.74937841044784,0,0,1.06644125267617,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0,0,0,0,1.13800740571849,0.913988100877831,0,1.01825663922657,0.775809948670503,0.49095073923223,0.442655759869801,0,0,0,0,0.500535317148282,0.196558995113203,0.449724224769707,0,0.482354319504834,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,0,0.963963949265421,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0.776152102696527,0.643011105094777,1.59606210278046,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.422190474497091,0.119372344003136,0.164140899745061,0,0.18542530201051,0.512612642393558,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0.679913719975421,0.419854356970974,0.552799895217695,0,2.05618395827738,1.21991680276109,0.216010681643603,0.418176592028937,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,56.369293868419,0.897099276263873,0.992750942742586,0.777804753376191,0.129159823477731,0.337912250981556,0.352071715937262,0.651021924219751,1.99232754408851,1.93267296660805,16.4177103566983,1.26404448251271,0.405450430580328,0.924398614483445,0.649604114888975,0.716106782669926,0.79472541912506,1.08175904567972,0.443068581523732,0.403865799792591,0.685861259894999,1.91569751759997,1.55932609183604,0.962118416403295,0.701261413089414,0,0.665957860122194,1.34570784914214,0.335769232728157,0.386379188064381,0,0,0,1.00314420807073,0,0,0,1.03111909406213,0,0.755393897389701,0,0.45032120322422,0,1.03552062350364,1.24544817101012,1.99512436700516,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,1.13175804831646,0.187283014939765,0.576226371643824,0.287177344778066,1.42888107384922,0.463537303779422,0,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.619747364743864,0.385813221962283,1.74867404556562,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | ||
|short_description=p5@Rnf138 | |short_description=p5@Rnf138 | ||
}} | }} |
Latest revision as of 02:27, 27 September 2015
Short description: | p5@Rnf138 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rnf138_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -74bp_to_ENSMUST00000052396, ENSMUST00000072847, ENSMUST00000167653, NM_019706, NM_207623, uc008efb.1, uc008efc.1, uc012bae.1_5end |
EntrezGene: | Rnf138 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.82e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.82e-14 | 23 |
neuron | 9.83e-10 | 33 |
neuronal stem cell | 9.83e-10 | 33 |
neuroblast | 9.83e-10 | 33 |
electrically signaling cell | 9.83e-10 | 33 |
electrically responsive cell | 1.37e-07 | 39 |
electrically active cell | 1.37e-07 | 39 |
neural cell | 1.76e-07 | 43 |
neuron of cerebral cortex | 2.68e-07 | 6 |
ectodermal cell | 3.26e-07 | 44 |
neurectodermal cell | 3.26e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.90e-09 | 34 |