FFCP PHASE1:Mm9::chr2:84727165..84727201,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:84727165..84727201,- to FFCP PHASE1:Mm9::chr2:84727165..84727201,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269295 | |EntrezGene=269295 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=731 | |||
|TSSclassifier=NA | |||
|UniProt=A2ATS6 | |UniProt=A2ATS6 | ||
|association_with_transcript=-298bp_to_ENSMUST00000151799_5end | |||
|cluster_id=chr2:84727165..84727201,- | |||
|description=CAGE_peak_1_at_Rtn4rl2_5end | |||
|id=chr2:84727165..84727201,- | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-08!23;CL:0000337!2.46e-08!23;CL:0000393!1.16e-07!39;CL:0000211!1.16e-07!39;CL:0000540!3.02e-07!33;CL:0000047!3.02e-07!33;CL:0000031!3.02e-07!33;CL:0000404!3.02e-07!33;CL:0000221!3.35e-07!44;CL:0000133!3.35e-07!44;CL:0000055!6.65e-07!50;CL:0002319!8.85e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-08,23;CL:0000337,1.72e-08,23;CL:0000393,1.22e-07,39;CL:0000211,1.22e-07,39;CL:0000540,2.24e-07,33;CL:0000047,2.24e-07,33;CL:0000031,2.24e-07,33;CL:0000404,2.24e-07,33;CL:0000221,2.73e-07,44;CL:0000133,2.73e-07,44;CL:0002319,7.35e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.64e-18!49;UBERON:0004121!2.41e-16!102;UBERON:0000924!2.41e-16!102;UBERON:0006601!2.41e-16!102;UBERON:0000033!2.43e-16!63;UBERON:0002780!1.33e-15!39;UBERON:0001890!1.33e-15!39;UBERON:0006240!1.33e-15!39;UBERON:0001017!1.70e-15!73;UBERON:0005743!1.70e-15!73;UBERON:0000073!3.77e-15!75;UBERON:0001016!3.77e-15!75;UBERON:0003080!5.77e-15!40;UBERON:0002346!1.11e-14!71;UBERON:0003075!1.11e-14!71;UBERON:0007284!1.11e-14!71;UBERON:0002020!2.51e-14!34;UBERON:0002791!8.79e-14!29;UBERON:0003528!8.79e-14!29;UBERON:0001893!8.79e-14!29;UBERON:0000955!2.94e-13!50;UBERON:0006238!2.94e-13!50;UBERON:0002616!1.02e-12!49;UBERON:0001049!2.83e-12!52;UBERON:0005068!2.83e-12!52;UBERON:0006241!2.83e-12!52;UBERON:0007135!2.83e-12!52;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0002619!2.41e-09!17;UBERON:0000025!1.70e-08!114;UBERON:0007811!3.26e-08!86;UBERON:0002021!5.56e-08!10;UBERON:0000411!5.56e-08!10;UBERON:0001950!5.56e-08!10;UBERON:0004111!5.60e-08!122;UBERON:0000153!7.43e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.58e-20,92;UBERON:0003056,3.23e-18,49;UBERON:0004121,3.49e-16,95;UBERON:0000924,3.49e-16,95;UBERON:0006601,3.49e-16,95;UBERON:0002780,6.33e-16,39;UBERON:0001890,6.33e-16,39;UBERON:0006240,6.33e-16,39;UBERON:0001017,1.05e-15,73;UBERON:0001016,2.36e-15,75;UBERON:0003080,2.84e-15,40;UBERON:0002346,5.33e-15,64;UBERON:0003075,5.33e-15,64;UBERON:0007284,5.33e-15,64;UBERON:0002020,1.28e-14,34;UBERON:0010371,2.67e-14,73;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0000073,9.65e-14,54;UBERON:0000955,1.46e-12,47;UBERON:0006238,1.46e-12,47;UBERON:0001049,2.08e-12,52;UBERON:0005068,2.08e-12,52;UBERON:0006241,2.08e-12,52;UBERON:0007135,2.08e-12,52;UBERON:0000956,4.19e-12,21;UBERON:0001869,4.19e-12,21;UBERON:0000203,4.19e-12,21;UBERON:0002616,5.12e-12,46;UBERON:0002619,1.60e-09,17;UBERON:0002021,3.96e-08,10;UBERON:0000411,3.96e-08,10;UBERON:0001950,3.96e-08,10;UBERON:0000025,1.24e-07,114;UBERON:0004111,6.95e-07,122 | |||
|phase1_expression=55.8919476395731,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0.999329285446988,0.607425802169478,0,0,0,0,11.3107575900923,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,34.2916563668201,43.0545351309199,47.5445043046316,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,0.202753862439029,4.77221555620372,3.12956537739216,0.436050312760893,1.31811709640683,1.94429899074283,1.95980990275508,10.062679505548,0,0,0,39.1034342774639,32.0917452731408,32.4873418134789,12.7459370341547,15.340738398889,14.5781222806421,0,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,22.7696083993988,14.9845139075406,55.9923906465779,52.5173100110277,55.9464397194676,3.42781181284564,6.84692476950002,22.5383070555515,18.4981759065196,20.2228133054205,3.30347642998166,15.1947932321373,9.98442466165583,9.75958529203434,11.3444678066988,14.0646610050325,1.67509799400829,4.50210088025344,15.5854212732346,4.71405736757868,4.41352210477219,7.82877672466262,1.28734528666413,3.40072020480535,10.4351215932604,0.860423876981386,0.679971333707751,0,0.649776417447669,0,4.21333260395256,1.1930122580464,0.779358013808606,0.35333957451034,24.6475984609191,12.8326477414318,20.3844191765317,21.3320010945999,0.216491041011214,0,0,4.22480354960522,12.6879562987114,3.71105347662062,2.60227990149204,4.87144765299426,3.92046345335299,2.71300752994721,4.23319345688537,2.13633205260448,1.48316980640624,7.22996784599558,0.884610551949874,0.808834249737046,1.10420759230197,0.484875253135222,1.86391761218122,0.878342391034642,0,2.81002760729451,0,0,0,1.19832511523858,20.1300265240196,8.67015029578764,102.730173233635,79.2717917724025,7.2725815595846,18.9822277789276,13.9519928474933,1.61729061793121,0.758168275301024,7.57590681191306,2.86264974517948,7.81667155073808,12.4242869565691,8.28876498096433,11.3620953582718,5.89323113310309,9.18276900685342,26.6464471861186,0.862271971731369,2.64748512234947,1.93546236580344,2.41115305670332,3.33656699070717,3.1342694986995,1.02891068203972,0.995171334092466,0,0,0,1.65700618028402,1.64168241986767,2.70093092191522,6.15536312521547,6.49321964766433,6.32495162838251,7.90615412151387,6.17028823219124,12.1435956061856,5.10135534731789,5.08919138645195,8.26901857367728,5.99419948443863,6.14740322814942,8.72341721942416,102.200915002166,98.3768094345959,0.660837565967596,2.90895623329899,5.54549451391608,3.25131340604614,2.31961430379768,3.02525286935014,2.66853652613844,2.85338439168839,2.37264530772256,6.42325923423642,2.26201687920243,1.79060824837036,2.9244613067868,1.79763881730844,1.51296634912286,2.98711909881551,5.31070122668629,2.97046132785295,1.1270773567308,3.46207257337034,2.13347735884388,3.29638353484497,1.01178459398812,1.62371162777562,1.255989822731,2.96153193412321,1.77871576252289,0.667380422864376,0.982794975566015,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,1.29708181420028,0.274561413188081,2.87536413054709,1.86070473834252,0.936113019343682,1.26289438973556,0.717589654087649,3.85954817090694,6.65111484599777,2.84237117655727,2.44447464663039,1.52770577197669,2.11221223459652,3.01511263395268,5.47500374037832,13.0739544064725,1.89162172927429,3.10050565508285,1.59454768657487,3.11340297959902,2.93564469172023,6.94315481191256,0,0,4.91764273019036,1.65562047782839,2.88991061978026,1.99259867206745,10.9836413402373,1.00988370881749,2.52406575533005,2.73307121007647,3.23135096599198,2.38968797952552,1.78238939265915,2.83076530788832,4.04810701674894,2.33804686329049,2.76701444562566,33.7387382242897,4.11626247103979,4.98583690268315,9.61033060186099,1.81467135269789,2.65490276679926,5.58395463156457,3.02323556964751,4.14931175462976,8.56375489354241,6.7635732547664,15.5056975900933,5.08947221268508,2.49548164869305,2.84433082142234,1.05418608574999,2.06271086496374,8.85142974959849,1.08036656418786,2.97524972700335,5.14408884075822,5.85222771019503,9.45354733290974,11.0247843803421,15.8321773539592,2.11204537257339,1.0591603543191,0.882113592219848,6.10079135883476,1.77610869365496,1.02531972377865,0.596861720015682,1.14898629821543,3.78925087618806,1.11255181206306,3.2465467351592,1.857481811669,2.96311243791539,0.565105371014073,1.77702496037333,1.37266903923914,0,0,0,0.954670618015114,2.05618395827738,2.43983360552218,1.72808545314882,0.627264888043406,2.83871332870031,1.88810084938749,1.57041565878138,0.785267825952089,2.46268449254406,1.86401793926078,1.12738587736838,0,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.87771581833206,1.3020438484395,0.524296722128554,0,1.44015003128933,1.58005560314089,7.50083296573608,3.08132871494482,2.5984164595559,0.716106782669926,0.993406773906324,0,0.295379054349154,0.706765149637033,0.457240839929999,0.504130925684203,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,0.887943813496259,0.897138566094757,0.335769232728157,2.51146472241848,4.129014459926,1.28206136987086,0.643105137237198,0.501572104035363,97.7020687727525,85.1601687538277,88.7988045831065,77.8494916016905,56.8618491409633,71.0070263546318,85.7278575294393,81.5081377835839,75.6747823003622,83.359410192043,2.69847103718859,7.98049746802062,6.31714341290296,5.83456120963906,3.35381060204772,4.22840069435032,4.22268782823069,5.15087643097235,3.20919209591815,3.28506375292937,3.04175159868288,4.33840585187975,4.40115085108447,6.53056554529667,4.307660171671,4.28664322154766,5.33067899346335,3.6652751888104,6.59337441285291,5.88795680537589,5.82877729055206,4.2594193478241,5.96090474868302,3.63366041580821,3.48204707536723,4.39995961036718,5.48783918618318,5.26139422875686,2.71608227691724,7.85599180320834,5.33857581558784,4.13718825977367,4.50154147486658,4.64810523557898,5.98010494041538,15.4882558321526,4.91256377735358,5.58664740525576,4.97349663378993,1.98532277207564,1.15933917810211 | |phase1_expression=55.8919476395731,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0.999329285446988,0.607425802169478,0,0,0,0,11.3107575900923,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,34.2916563668201,43.0545351309199,47.5445043046316,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,0.202753862439029,4.77221555620372,3.12956537739216,0.436050312760893,1.31811709640683,1.94429899074283,1.95980990275508,10.062679505548,0,0,0,39.1034342774639,32.0917452731408,32.4873418134789,12.7459370341547,15.340738398889,14.5781222806421,0,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,22.7696083993988,14.9845139075406,55.9923906465779,52.5173100110277,55.9464397194676,3.42781181284564,6.84692476950002,22.5383070555515,18.4981759065196,20.2228133054205,3.30347642998166,15.1947932321373,9.98442466165583,9.75958529203434,11.3444678066988,14.0646610050325,1.67509799400829,4.50210088025344,15.5854212732346,4.71405736757868,4.41352210477219,7.82877672466262,1.28734528666413,3.40072020480535,10.4351215932604,0.860423876981386,0.679971333707751,0,0.649776417447669,0,4.21333260395256,1.1930122580464,0.779358013808606,0.35333957451034,24.6475984609191,12.8326477414318,20.3844191765317,21.3320010945999,0.216491041011214,0,0,4.22480354960522,12.6879562987114,3.71105347662062,2.60227990149204,4.87144765299426,3.92046345335299,2.71300752994721,4.23319345688537,2.13633205260448,1.48316980640624,7.22996784599558,0.884610551949874,0.808834249737046,1.10420759230197,0.484875253135222,1.86391761218122,0.878342391034642,0,2.81002760729451,0,0,0,1.19832511523858,20.1300265240196,8.67015029578764,102.730173233635,79.2717917724025,7.2725815595846,18.9822277789276,13.9519928474933,1.61729061793121,0.758168275301024,7.57590681191306,2.86264974517948,7.81667155073808,12.4242869565691,8.28876498096433,11.3620953582718,5.89323113310309,9.18276900685342,26.6464471861186,0.862271971731369,2.64748512234947,1.93546236580344,2.41115305670332,3.33656699070717,3.1342694986995,1.02891068203972,0.995171334092466,0,0,0,1.65700618028402,1.64168241986767,2.70093092191522,6.15536312521547,6.49321964766433,6.32495162838251,7.90615412151387,6.17028823219124,12.1435956061856,5.10135534731789,5.08919138645195,8.26901857367728,5.99419948443863,6.14740322814942,8.72341721942416,102.200915002166,98.3768094345959,0.660837565967596,2.90895623329899,5.54549451391608,3.25131340604614,2.31961430379768,3.02525286935014,2.66853652613844,2.85338439168839,2.37264530772256,6.42325923423642,2.26201687920243,1.79060824837036,2.9244613067868,1.79763881730844,1.51296634912286,2.98711909881551,5.31070122668629,2.97046132785295,1.1270773567308,3.46207257337034,2.13347735884388,3.29638353484497,1.01178459398812,1.62371162777562,1.255989822731,2.96153193412321,1.77871576252289,0.667380422864376,0.982794975566015,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,1.29708181420028,0.274561413188081,2.87536413054709,1.86070473834252,0.936113019343682,1.26289438973556,0.717589654087649,3.85954817090694,6.65111484599777,2.84237117655727,2.44447464663039,1.52770577197669,2.11221223459652,3.01511263395268,5.47500374037832,13.0739544064725,1.89162172927429,3.10050565508285,1.59454768657487,3.11340297959902,2.93564469172023,6.94315481191256,0,0,4.91764273019036,1.65562047782839,2.88991061978026,1.99259867206745,10.9836413402373,1.00988370881749,2.52406575533005,2.73307121007647,3.23135096599198,2.38968797952552,1.78238939265915,2.83076530788832,4.04810701674894,2.33804686329049,2.76701444562566,33.7387382242897,4.11626247103979,4.98583690268315,9.61033060186099,1.81467135269789,2.65490276679926,5.58395463156457,3.02323556964751,4.14931175462976,8.56375489354241,6.7635732547664,15.5056975900933,5.08947221268508,2.49548164869305,2.84433082142234,1.05418608574999,2.06271086496374,8.85142974959849,1.08036656418786,2.97524972700335,5.14408884075822,5.85222771019503,9.45354733290974,11.0247843803421,15.8321773539592,2.11204537257339,1.0591603543191,0.882113592219848,6.10079135883476,1.77610869365496,1.02531972377865,0.596861720015682,1.14898629821543,3.78925087618806,1.11255181206306,3.2465467351592,1.857481811669,2.96311243791539,0.565105371014073,1.77702496037333,1.37266903923914,0,0,0,0.954670618015114,2.05618395827738,2.43983360552218,1.72808545314882,0.627264888043406,2.83871332870031,1.88810084938749,1.57041565878138,0.785267825952089,2.46268449254406,1.86401793926078,1.12738587736838,0,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.87771581833206,1.3020438484395,0.524296722128554,0,1.44015003128933,1.58005560314089,7.50083296573608,3.08132871494482,2.5984164595559,0.716106782669926,0.993406773906324,0,0.295379054349154,0.706765149637033,0.457240839929999,0.504130925684203,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,0.887943813496259,0.897138566094757,0.335769232728157,2.51146472241848,4.129014459926,1.28206136987086,0.643105137237198,0.501572104035363,97.7020687727525,85.1601687538277,88.7988045831065,77.8494916016905,56.8618491409633,71.0070263546318,85.7278575294393,81.5081377835839,75.6747823003622,83.359410192043,2.69847103718859,7.98049746802062,6.31714341290296,5.83456120963906,3.35381060204772,4.22840069435032,4.22268782823069,5.15087643097235,3.20919209591815,3.28506375292937,3.04175159868288,4.33840585187975,4.40115085108447,6.53056554529667,4.307660171671,4.28664322154766,5.33067899346335,3.6652751888104,6.59337441285291,5.88795680537589,5.82877729055206,4.2594193478241,5.96090474868302,3.63366041580821,3.48204707536723,4.39995961036718,5.48783918618318,5.26139422875686,2.71608227691724,7.85599180320834,5.33857581558784,4.13718825977367,4.50154147486658,4.64810523557898,5.98010494041538,15.4882558321526,4.91256377735358,5.58664740525576,4.97349663378993,1.98532277207564,1.15933917810211 | ||
|short_description=p1@Rtn4rl2 | |||
}} | }} |
Latest revision as of 01:55, 27 September 2015
Short description: | p1@Rtn4rl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rtn4rl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:731 |
Association with transcript: | -298bp_to_ENSMUST00000151799_5end |
EntrezGene: | Rtn4rl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-08 | 23 |
electrically responsive cell | 1.22e-07 | 39 |
electrically active cell | 1.22e-07 | 39 |
neuron | 2.24e-07 | 33 |
neuronal stem cell | 2.24e-07 | 33 |
neuroblast | 2.24e-07 | 33 |
electrically signaling cell | 2.24e-07 | 33 |
ectodermal cell | 2.73e-07 | 44 |
neurectodermal cell | 2.73e-07 | 44 |
neural cell | 7.35e-07 | 43 |