FFCP PHASE1:Mm9::chr1:34068409..34068447,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:34068409..34068447,+ to FFCP PHASE1:Mm9::chr1:34068409..34068447,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13518 | |EntrezGene=13518 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PXR0,E9PXE5,E9QL23,E9Q9X1,Q6ZQ59,Q80VL5,Q91ZU6 | |UniProt=E9PXR0,E9PXE5,E9QL23,E9Q9X1,Q6ZQ59,Q80VL5,Q91ZU6 | ||
|association_with_transcript=-222bp_to_ENSMUST00000088216,ENSMUST00000097785,ENSMUST00000097786,ENSMUST00000097789,ENSMUST00000115104,NM_133833,NM_134448,uc007aoi.1,uc007aoj.1_5end | |||
|cluster_id=chr1:34068409..34068447,+ | |||
|description=CAGE_peak_1_at_Dst_5end | |||
|id=chr1:34068409..34068447,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.01e-10!23;UBERON:0001009!2.01e-10!23;UBERON:0007100!2.54e-09!18;UBERON:0000948!2.54e-09!18;UBERON:0005498!2.54e-09!18;UBERON:0004140!2.54e-09!18;UBERON:0009881!2.54e-09!18;UBERON:0004141!2.54e-09!18;UBERON:0003084!2.54e-09!18;UBERON:0007005!2.54e-09!18;UBERON:0004139!2.54e-09!18;UBERON:0004291!2.54e-09!18;UBERON:0004121!2.71e-08!102;UBERON:0000924!2.71e-08!102;UBERON:0006601!2.71e-08!102;UBERON:0000468!3.94e-08!333;UBERON:0000073!2.43e-07!75;UBERON:0001016!2.43e-07!75;UBERON:0000010!4.38e-07!11;UBERON:0004872!9.87e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.08e-10,92;UBERON:0004535,1.93e-10,23;UBERON:0001009,1.93e-10,23;UBERON:0007100,2.46e-09,18;UBERON:0000948,2.46e-09,18;UBERON:0005498,2.46e-09,18;UBERON:0004140,2.46e-09,18;UBERON:0009881,2.46e-09,18;UBERON:0004141,2.46e-09,18;UBERON:0003084,2.46e-09,18;UBERON:0007005,2.46e-09,18;UBERON:0004139,2.46e-09,18;UBERON:0004291,2.46e-09,18;UBERON:0004121,6.31e-09,95;UBERON:0000924,6.31e-09,95;UBERON:0006601,6.31e-09,95;UBERON:0001016,2.37e-07,75;UBERON:0000010,4.28e-07,11;UBERON:0004872,9.65e-07,33 | |||
|phase1_expression=25.4636666896622,0,0,0,0,0,0,16.2695387536386,0.84473233291,1.40438715793196,0.34243593645101,0,0.856003649656029,0.611942816932982,4.33042690360362,3.03712901084739,1.39912375625629,1.57731082679119,1.09691546884591,1.27316895539409,10.8004978491859,0.0992909512008853,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,26.1865381389201,32.2378641278056,22.7597972680485,5.47673941043627,1.74420125104357,2.63623419281366,9.3326351555656,4.05960622713551,2.87505128729943,0.838913030288682,2.17608642603403,0.336093799142464,19.0371982666601,48.1376179097111,31.455997628924,10.3181395038395,7.40587370980846,12.0427966666174,14.9091594110418,11.5608323494448,7.19919773825119,10.8775299882367,13.4991221839759,9.88680364710736,11.1423308543251,7.56934169851887,4.99521971827255,6.30974884054146,22.2807767834967,17.8903518170807,6.00204916153275,4.50473713785711,3.67687514644008,17.6185409599022,30.9003358166154,28.1099955858926,11.4741070325269,8.87430142943374,9.37644067002168,19.5428099300967,15.1945904708554,21.0861581931998,36.8285731842085,29.7556812870125,20.8767379324337,91.1743367731536,110.787907116548,20.0006497204158,2.58127163094416,8.83962733820076,0.539703191637817,0.649776417447669,0,28.9315505471409,5.45377032249785,2.59786004602869,3.88673531961374,68.8724322707968,48.7640614174408,109.566253073858,71.1066703153331,3.46385665617943,4.05375784760158,4.54972000513305,10.3907330544345,14.2415836005944,9.35185476108396,7.11289839741157,9.43842982767638,8.30215790121811,8.44046787094686,15.9920641704559,4.02133092254962,8.65182387070309,30.5104643101014,27.4229271104461,33.1622042392189,39.0889487674897,32.4866419600599,7.45567044872489,13.7606974595427,17.5935233723302,3.83185582812887,0.958520996047362,1.19980546198682,0.635351135365324,29.3589653233452,45.292559679044,13.6963243803022,25.3783507480724,27.105838477015,30.3370545056958,35.8553191379744,7.23059483337246,22.0200337979865,5.05445516867349,15.7831391914855,7.67710613479952,6.43725892413724,11.343914177737,14.7690721479001,18.0296722751019,12.2989171473456,12.9308379892426,11.9003550539947,2.37124792226126,12.1027891307404,8.79755620819744,6.57587197282724,9.73165372289593,25.7706603226403,22.4302528684658,5.7719937377363,0.702213187313235,0.257347907114715,0,22.7838349789052,15.2441938987713,24.668502420159,36.2219445445372,39.1560821177334,34.7101003996601,43.9489155578271,42.1189240197402,57.5653137870146,54.3047504714485,60.9061291733443,95.5801264545639,101.316591285755,80.7944424271066,94.4813188073017,22.9216043934899,12.1427442607556,0.330418782983798,2.90895623329899,4.05247676016945,6.0381534683714,7.98978260196979,7.26060688644033,5.55945109612176,5.89699440948933,7.59246498471219,4.94096864172033,8.79673230800943,5.96869416123452,7.40863531052657,5.39291645192533,4.97117514711797,6.57166201739412,6.06937283049861,20.221986731922,20.2873924211545,16.0884548997798,13.9645790760691,18.5158564510441,7.65162099203513,3.09981310757165,2.98297582898612,2.09775178667061,1.48226313543574,2.8363667971736,2.55526693647164,0.899448449539415,2.63718157805054,5.30589751455317,3.05551022137704,6.32931502391783,4.21551589615092,2.19649130550465,14.3768206527355,5.95425516269605,5.92871578917665,0.757736633841335,4.12614051100398,0.482443521363367,14.965008403495,7.76914788258988,4.88894929326078,4.92260748748046,6.10194645550105,7.20276906999808,8.56957107189649,15.2204245329083,17.1822307075748,16.6098517236581,22.6425771493632,15.0754249538479,14.6782234586011,16.7792907954553,10.5553898757491,36.9855864996723,7.86822836830458,11.5893433447988,40.4587486769236,42.7822656061542,4.09837363441689,134.062062345522,26.8181986503818,24.9880796349849,34.8985904327134,50.661385165941,65.5028101802239,103.322933737924,41.6955022725141,55.2363571452379,56.9214400242994,15.7447445046685,13.0584878391607,4.27357448801413,6.18970445543589,16.6619824202261,3.98235415019888,2.42780636154981,3.32555912661226,2.26326095707078,1.18120757152309,6.7635732547664,10.5955600198971,8.36127577798263,9.26893183800275,8.21695570633122,5.27093042874994,2.06271086496374,6.12791290356818,12.0640933000978,4.2688365648309,4.71541477069503,5.85222771019503,9.81028496811388,10.0374902567294,8.22055362609418,27.4565898434541,17.1583977399694,8.60060752414351,53.0933734471566,28.4177390984794,27.5026937672391,13.8471919043638,10.9974402829191,6.70405924248657,58.0381195292895,7.51831875510552,3.714963623338,2.59272338317596,3.39063222608444,4.10082683163076,4.80434163733698,4.9293744698218,5.17820373597535,5.11339903076368,0.954670618015114,4.58687190692646,6.50622294805916,7.45236851670429,7.52717865652087,4.80397640241591,12.1377911746339,15.7041565878138,10.7319936213452,8.55458823725833,7.45607175704311,0.56369293868419,4.33597983527538,2.15096037594227,4.66682852025714,3.22899558694328,5.91346439217724,9.97536528488909,15.3641174115861,12.1636839533825,0.7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| |phase1_expression=25.4636666896622,0,0,0,0,0,0,16.2695387536386,0.84473233291,1.40438715793196,0.34243593645101,0,0.856003649656029,0.611942816932982,4.33042690360362,3.03712901084739,1.39912375625629,1.57731082679119,1.09691546884591,1.27316895539409,10.8004978491859,0.0992909512008853,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,26.1865381389201,32.2378641278056,22.7597972680485,5.47673941043627,1.74420125104357,2.63623419281366,9.3326351555656,4.05960622713551,2.87505128729943,0.838913030288682,2.17608642603403,0.336093799142464,19.0371982666601,48.1376179097111,31.455997628924,10.3181395038395,7.40587370980846,12.0427966666174,14.9091594110418,11.5608323494448,7.19919773825119,10.8775299882367,13.4991221839759,9.88680364710736,11.1423308543251,7.56934169851887,4.99521971827255,6.30974884054146,22.2807767834967,17.8903518170807,6.00204916153275,4.50473713785711,3.67687514644008,17.6185409599022,30.9003358166154,28.1099955858926,11.4741070325269,8.87430142943374,9.37644067002168,19.5428099300967,15.1945904708554,21.0861581931998,36.8285731842085,29.7556812870125,20.8767379324337,91.1743367731536,110.787907116548,20.0006497204158,2.58127163094416,8.83962733820076,0.539703191637817,0.649776417447669,0,28.9315505471409,5.45377032249785,2.59786004602869,3.88673531961374,68.8724322707968,48.7640614174408,109.566253073858,71.1066703153331,3.46385665617943,4.05375784760158,4.54972000513305,10.3907330544345,14.2415836005944,9.35185476108396,7.11289839741157,9.43842982767638,8.30215790121811,8.44046787094686,15.9920641704559,4.02133092254962,8.65182387070309,30.5104643101014,27.4229271104461,33.1622042392189,39.0889487674897,32.4866419600599,7.45567044872489,13.7606974595427,17.5935233723302,3.83185582812887,0.958520996047362,1.19980546198682,0.635351135365324,29.3589653233452,45.292559679044,13.6963243803022,25.3783507480724,27.105838477015,30.3370545056958,35.8553191379744,7.23059483337246,22.0200337979865,5.05445516867349,15.7831391914855,7.67710613479952,6.43725892413724,11.343914177737,14.7690721479001,18.0296722751019,12.2989171473456,12.9308379892426,11.9003550539947,2.37124792226126,12.1027891307404,8.79755620819744,6.57587197282724,9.73165372289593,25.7706603226403,22.4302528684658,5.7719937377363,0.702213187313235,0.257347907114715,0,22.7838349789052,15.2441938987713,24.668502420159,36.2219445445372,39.1560821177334,34.7101003996601,43.9489155578271,42.1189240197402,57.5653137870146,54.3047504714485,60.9061291733443,95.5801264545639,101.316591285755,80.7944424271066,94.4813188073017,22.9216043934899,12.1427442607556,0.330418782983798,2.90895623329899,4.05247676016945,6.0381534683714,7.98978260196979,7.26060688644033,5.55945109612176,5.89699440948933,7.59246498471219,4.94096864172033,8.79673230800943,5.96869416123452,7.40863531052657,5.39291645192533,4.97117514711797,6.57166201739412,6.06937283049861,20.221986731922,20.2873924211545,16.0884548997798,13.9645790760691,18.5158564510441,7.65162099203513,3.09981310757165,2.98297582898612,2.09775178667061,1.48226313543574,2.8363667971736,2.55526693647164,0.899448449539415,2.63718157805054,5.30589751455317,3.05551022137704,6.32931502391783,4.21551589615092,2.19649130550465,14.3768206527355,5.95425516269605,5.92871578917665,0.757736633841335,4.12614051100398,0.482443521363367,14.965008403495,7.76914788258988,4.88894929326078,4.92260748748046,6.10194645550105,7.20276906999808,8.56957107189649,15.2204245329083,17.1822307075748,16.6098517236581,22.6425771493632,15.0754249538479,14.6782234586011,16.7792907954553,10.5553898757491,36.9855864996723,7.86822836830458,11.5893433447988,40.4587486769236,42.7822656061542,4.09837363441689,134.062062345522,26.8181986503818,24.9880796349849,34.8985904327134,50.661385165941,65.5028101802239,103.322933737924,41.6955022725141,55.2363571452379,56.9214400242994,15.7447445046685,13.0584878391607,4.27357448801413,6.18970445543589,16.6619824202261,3.98235415019888,2.42780636154981,3.32555912661226,2.26326095707078,1.18120757152309,6.7635732547664,10.5955600198971,8.36127577798263,9.26893183800275,8.21695570633122,5.27093042874994,2.06271086496374,6.12791290356818,12.0640933000978,4.2688365648309,4.71541477069503,5.85222771019503,9.81028496811388,10.0374902567294,8.22055362609418,27.4565898434541,17.1583977399694,8.60060752414351,53.0933734471566,28.4177390984794,27.5026937672391,13.8471919043638,10.9974402829191,6.70405924248657,58.0381195292895,7.51831875510552,3.714963623338,2.59272338317596,3.39063222608444,4.10082683163076,4.80434163733698,4.9293744698218,5.17820373597535,5.11339903076368,0.954670618015114,4.58687190692646,6.50622294805916,7.45236851670429,7.52717865652087,4.80397640241591,12.1377911746339,15.7041565878138,10.7319936213452,8.55458823725833,7.45607175704311,0.56369293868419,4.33597983527538,2.15096037594227,4.66682852025714,3.22899558694328,5.91346439217724,9.97536528488909,15.3641174115861,12.1636839533825,0.7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| ||
|short_description=p1@Dst | |||
}} | }} |
Latest revision as of 01:49, 27 September 2015
Short description: | p1@Dst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dst_5end |
Coexpression cluster: | NA |
Association with transcript: | -222bp_to_ENSMUST00000088216, ENSMUST00000097785, ENSMUST00000097786, ENSMUST00000097789, ENSMUST00000115104, NM_133833, NM_134448, uc007aoi.1, uc007aoj.1_5end |
EntrezGene: | Dst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.08e-10 | 92 |
cardiovascular system | 1.93e-10 | 23 |
circulatory system | 1.93e-10 | 23 |
primary circulatory organ | 2.46e-09 | 18 |
heart | 2.46e-09 | 18 |
primitive heart tube | 2.46e-09 | 18 |
primary heart field | 2.46e-09 | 18 |
anterior lateral plate mesoderm | 2.46e-09 | 18 |
heart tube | 2.46e-09 | 18 |
heart primordium | 2.46e-09 | 18 |
cardiac mesoderm | 2.46e-09 | 18 |
cardiogenic plate | 2.46e-09 | 18 |
heart rudiment | 2.46e-09 | 18 |
ectoderm-derived structure | 6.31e-09 | 95 |
ectoderm | 6.31e-09 | 95 |
presumptive ectoderm | 6.31e-09 | 95 |
nervous system | 2.37e-07 | 75 |
peripheral nervous system | 4.28e-07 | 11 |
splanchnic layer of lateral plate mesoderm | 9.65e-07 | 33 |