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FFCP PHASE1:Mm9::chr18:12802251..12802331,+: Difference between revisions

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{{FFCP|EntrezGene=72747|HGNC=|MCL_coexpression_id=207|UniProt=G3X8X1,Q8BJQ0,Q8VE09|association_with_transcript=209bp_to_NM_028341,uc008eci.2,uc008ecj.2_5end|description=CAGE_peak_1_at_Ttc39c_5end|id=chr18:12802251..12802331,+|ontology_enrichment_celltype=CL:0000117!4.39e-08!23;CL:0000337!4.39e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-08,23;CL:0000337,4.38e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.57e-12!102;UBERON:0000924!6.57e-12!102;UBERON:0006601!6.57e-12!102;UBERON:0002346!3.82e-11!71;UBERON:0003075!3.82e-11!71;UBERON:0007284!3.82e-11!71;UBERON:0001017!2.92e-10!73;UBERON:0005743!2.92e-10!73;UBERON:0000073!5.54e-10!75;UBERON:0001016!5.54e-10!75;UBERON:0000033!8.45e-10!63;UBERON:0000955!1.77e-09!50;UBERON:0006238!1.77e-09!50;UBERON:0001049!2.15e-09!52;UBERON:0005068!2.15e-09!52;UBERON:0006241!2.15e-09!52;UBERON:0007135!2.15e-09!52;UBERON:0002616!6.17e-09!49;UBERON:0002020!3.23e-08!34;UBERON:0002791!8.83e-07!29;UBERON:0003528!8.83e-07!29;UBERON:0001893!8.83e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.04e-10,54;UBERON:0001017,2.92e-10,73;UBERON:0001016,5.53e-10,75;UBERON:0004121,8.32e-10,95;UBERON:0000924,8.32e-10,95;UBERON:0006601,8.32e-10,95;UBERON:0001049,2.15e-09,52;UBERON:0005068,2.15e-09,52;UBERON:0006241,2.15e-09,52;UBERON:0007135,2.15e-09,52;UBERON:0002346,4.82e-09,64;UBERON:0003075,4.82e-09,64;UBERON:0007284,4.82e-09,64;UBERON:0010371,1.15e-08,73;UBERON:0002020,3.23e-08,34;UBERON:0000955,3.81e-08,47;UBERON:0006238,3.81e-08,47;UBERON:0002616,1.25e-07,46;UBERON:0003528,8.81e-07,29;UBERON:0002791,8.81e-07,29;UBERON:0001893,8.81e-07,29|phase1_expression=9.76907967339243,42.2260243243627,53.6899102479653,83.1776581093783,104.687207558787,6.71517087647559,4.43864017131499,3.87369970324729,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0.262261207256992,0.999329285446988,0.607425802169478,0,0.630924330716475,1.09691546884591,1.27316895539409,14.2872727453797,0,0.261199789138935,13.1193786690593,11.2410547722913,32.1569899904411,18.0920038386811,14.0056301245828,18.6222951067246,18.146169342715,3.99114919179548,0,0,0,3.17736781726402,4.15586613396231,2.6542016314108,10.4632907684227,18.7520482685712,10.470474879476,15.2940186888064,11.6117732442936,10.1957174136542,10.7012295279241,11.1514624341466,12.4811791469943,6.25913075478431,7.41285531693518,4.39372365468944,7.19390626574849,12.1788186814065,5.75010257459886,0,5.80289713609076,0.336093799142464,2.82985379639542,5.44413535883638,5.67239301505187,20.2316460859598,21.1596391708813,17.747279298173,14.2314703469035,15.1180115338894,11.6986963246582,7.9109309005358,9.2362414942993,12.8828047522914,16.9056054341484,11.6132365785495,15.3906769698127,14.9330722559481,19.7099179238624,19.436431603742,13.9639511105048,12.6516021744072,25.7381260250806,38.540558349786,26.9420283359746,26.7275367865864,14.7712642257817,12.8997577479398,16.6692278578163,25.4056529091257,23.0732670112989,25.5173073787273,19.1508580557884,15.8032565687004,15.4711540034999,5.52801211332244,10.3533037346296,1.44932244350839,24.9522924324602,67.3171620370673,39.3983329895607,59.1296539877379,44.3546618226362,16.5724415755467,8.18065548374677,11.4305842025262,10.9535268098205,8.73229202615419,8.98285341900225,2.54805239706646,14.2213340630666,17.1027922398859,12.92135313923,16.1767822404731,27.2899472528553,5.17875767294343,13.2113503767694,13.3583701609925,28.3152894830291,32.2861696158482,28.0344111427878,18.5790157274414,13.0693254982862,1.73036477414062,3.32578520915797,4.42305275974937,3.23533699894818,3.75430581382669,2.42437626567611,3.72783522436244,36.8903804234549,41.0515545354372,21.2029355823131,7.6681679683789,14.3976655438418,10.0385479387721,29.5087559627501,24.2475319493872,13.6963243803022,20.5112697826886,22.2472447877388,21.4021685896347,25.6341195647057,5.6011650117674,5.22509276562391,7.07623723614289,25.0425808504904,7.1566243629487,9.65588838620586,7.38254732201932,8.89158425230719,7.96027040070536,7.55870949680614,6.37171727006156,33.8901415668111,10.1316956678436,7.75334928688059,8.97350733236139,6.57587197282724,10.8438427197983,10.7958171621872,12.7584924572925,10.5488161413801,7.72434506044558,18.7863972193742,20.1756084570871,3.10688658803253,6.0976775595085,5.76198596675248,3.07768156260773,3.14822770795846,2.62254091908543,2.32533944750408,1.87791380979733,2.91913355917924,4.60767579757745,2.95501435342371,3.16168357228837,4.09359964790931,3.07370161407471,3.62357330653004,41.6374098156972,12.5543627102727,48.9019798816021,29.618463466317,8.95810652247983,6.27039014023184,2.19074684247559,6.05050573870028,9.56225588532942,10.4624094361908,23.7264530772256,18.6109818838132,18.3474702424197,15.7175612912509,15.5971269695296,27.8634016682809,22.6944952368429,24.4943766102872,3.98302592001472,6.96915926919346,7.88954149711563,4.2766778847516,4.65485969202302,5.47059395144485,3.66771915320692,5.60918562322488,7.69293766422737,12.9567022117891,55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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72747
|HGNC=
|MCL_coexpression_id=207
|TSSclassifier=NA
|UniProt=G3X8X1,Q8BJQ0,Q8VE09
|association_with_transcript=209bp_to_NM_028341,uc008eci.2,uc008ecj.2_5end
|cluster_id=chr18:12802251..12802331,+
|description=CAGE_peak_1_at_Ttc39c_5end
|id=chr18:12802251..12802331,+
|ontology_enrichment_celltype=CL:0000117!4.39e-08!23;CL:0000337!4.39e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-08,23;CL:0000337,4.38e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.57e-12!102;UBERON:0000924!6.57e-12!102;UBERON:0006601!6.57e-12!102;UBERON:0002346!3.82e-11!71;UBERON:0003075!3.82e-11!71;UBERON:0007284!3.82e-11!71;UBERON:0001017!2.92e-10!73;UBERON:0005743!2.92e-10!73;UBERON:0000073!5.54e-10!75;UBERON:0001016!5.54e-10!75;UBERON:0000033!8.45e-10!63;UBERON:0000955!1.77e-09!50;UBERON:0006238!1.77e-09!50;UBERON:0001049!2.15e-09!52;UBERON:0005068!2.15e-09!52;UBERON:0006241!2.15e-09!52;UBERON:0007135!2.15e-09!52;UBERON:0002616!6.17e-09!49;UBERON:0002020!3.23e-08!34;UBERON:0002791!8.83e-07!29;UBERON:0003528!8.83e-07!29;UBERON:0001893!8.83e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.04e-10,54;UBERON:0001017,2.92e-10,73;UBERON:0001016,5.53e-10,75;UBERON:0004121,8.32e-10,95;UBERON:0000924,8.32e-10,95;UBERON:0006601,8.32e-10,95;UBERON:0001049,2.15e-09,52;UBERON:0005068,2.15e-09,52;UBERON:0006241,2.15e-09,52;UBERON:0007135,2.15e-09,52;UBERON:0002346,4.82e-09,64;UBERON:0003075,4.82e-09,64;UBERON:0007284,4.82e-09,64;UBERON:0010371,1.15e-08,73;UBERON:0002020,3.23e-08,34;UBERON:0000955,3.81e-08,47;UBERON:0006238,3.81e-08,47;UBERON:0002616,1.25e-07,46;UBERON:0003528,8.81e-07,29;UBERON:0002791,8.81e-07,29;UBERON:0001893,8.81e-07,29
|phase1_expression=9.76907967339243,42.2260243243627,53.6899102479653,83.1776581093783,104.687207558787,6.71517087647559,4.43864017131499,3.87369970324729,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0.262261207256992,0.999329285446988,0.607425802169478,0,0.630924330716475,1.09691546884591,1.27316895539409,14.2872727453797,0,0.261199789138935,13.1193786690593,11.2410547722913,32.1569899904411,18.0920038386811,14.0056301245828,18.6222951067246,18.146169342715,3.99114919179548,0,0,0,3.17736781726402,4.15586613396231,2.6542016314108,10.4632907684227,18.7520482685712,10.470474879476,15.2940186888064,11.6117732442936,10.1957174136542,10.7012295279241,11.1514624341466,12.4811791469943,6.25913075478431,7.41285531693518,4.39372365468944,7.19390626574849,12.1788186814065,5.75010257459886,0,5.80289713609076,0.336093799142464,2.82985379639542,5.44413535883638,5.67239301505187,20.2316460859598,21.1596391708813,17.747279298173,14.2314703469035,15.1180115338894,11.6986963246582,7.9109309005358,9.2362414942993,12.8828047522914,16.9056054341484,11.6132365785495,15.3906769698127,14.9330722559481,19.7099179238624,19.436431603742,13.9639511105048,12.6516021744072,25.7381260250806,38.540558349786,26.9420283359746,26.7275367865864,14.7712642257817,12.8997577479398,16.6692278578163,25.4056529091257,23.0732670112989,25.5173073787273,19.1508580557884,15.8032565687004,15.4711540034999,5.52801211332244,10.3533037346296,1.44932244350839,24.9522924324602,67.3171620370673,39.3983329895607,59.1296539877379,44.3546618226362,16.5724415755467,8.18065548374677,11.4305842025262,10.9535268098205,8.73229202615419,8.98285341900225,2.54805239706646,14.2213340630666,17.1027922398859,12.92135313923,16.1767822404731,27.2899472528553,5.17875767294343,13.2113503767694,13.3583701609925,28.3152894830291,32.2861696158482,28.0344111427878,18.5790157274414,13.0693254982862,1.73036477414062,3.32578520915797,4.42305275974937,3.23533699894818,3.75430581382669,2.42437626567611,3.72783522436244,36.8903804234549,41.0515545354372,21.2029355823131,7.6681679683789,14.3976655438418,10.0385479387721,29.5087559627501,24.2475319493872,13.6963243803022,20.5112697826886,22.2472447877388,21.4021685896347,25.6341195647057,5.6011650117674,5.22509276562391,7.07623723614289,25.0425808504904,7.1566243629487,9.65588838620586,7.38254732201932,8.89158425230719,7.96027040070536,7.55870949680614,6.37171727006156,33.8901415668111,10.1316956678436,7.75334928688059,8.97350733236139,6.57587197282724,10.8438427197983,10.7958171621872,12.7584924572925,10.5488161413801,7.72434506044558,18.7863972193742,20.1756084570871,3.10688658803253,6.0976775595085,5.76198596675248,3.07768156260773,3.14822770795846,2.62254091908543,2.32533944750408,1.87791380979733,2.91913355917924,4.60767579757745,2.95501435342371,3.16168357228837,4.09359964790931,3.07370161407471,3.62357330653004,41.6374098156972,12.5543627102727,48.9019798816021,29.618463466317,8.95810652247983,6.27039014023184,2.19074684247559,6.05050573870028,9.56225588532942,10.4624094361908,23.7264530772256,18.6109818838132,18.3474702424197,15.7175612912509,15.5971269695296,27.8634016682809,22.6944952368429,24.4943766102872,3.98302592001472,6.96915926919346,7.88954149711563,4.2766778847516,4.65485969202302,5.47059395144485,3.66771915320692,5.60918562322488,7.69293766422737,12.9567022117891,55.733093892384,1.66845105716094,3.14494392181125,2.9232074610031,6.28866376304359,8.68237775108701,11.2035374783825,24.4541716833189,34.5348033030825,24.9850886001154,58.9449646762154,37.9583766621873,45.8695379478404,58.0931419278357,49.6930835455697,57.4107790422407,6.46636165583116,7.01118223550794,4.72598431681875,4.75286240170527,3.05097322775053,2.68010011906905,3.09456733151818,3.31727201358258,4.72905432318573,5.75808193086815,5.58091690301205,4.09658286789345,4.83517949224508,4.62876987460837,10.5553898757491,13.5976420954677,1.47529281905711,5.24279817978992,24.4036896781444,27.0758996027989,9.01642199571715,4.79694761688309,8.20321370482267,7.80877488593277,7.75524231838076,4.30143836314594,5.12436950389506,4.81230102341015,7.69140333182299,6.13737301613755,6.7198922250909,81.2942930547172,13.9101283504103,8.19101776869374,9.44744364250741,8.24850614862677,1.32745138339963,3.64170954232472,2.41858845571801,2.64047111658257,2.06711325016541,3.3817866273832,4.13485269069154,1.81766864738753,2.13898427030833,1.58018378967908,1.05418608574999,4.12542172992747,8.5109901438447,7.0223826672211,6.98536892426874,7.50179622610573,5.67488747655275,5.70780216326626,8.39200005070817,9.74287837166718,3.52007562095566,6.14313005505079,3.96951116498931,14.5099902588502,13.0786185623683,9.58975506357678,9.90790455226033,13.29541287935,23.6099477670179,20.5822085231666,1.87957968877638,4.12773735926445,3.1483069652851,0.941842285023455,0.546776910884101,1.37266903923914,6.62915876976036,6.43776680688827,6.35719879500349,3.81868247206045,7.90839983952838,5.28630614529807,6.58832579012988,9.82714991268003,8.51613998610093,8.22672512947406,10.4969888771177,3.66458318777641,11.4061176496778,14.2908042009993,21.4203316699992,12.2603567756063,13.8985131983962,17.6950581393083,16.9199368755828,14.8681390431885,23.354090490505,25.3898550445703,26.9488515174077,11.3544536788223,13.8254403003775,2.21207784439725,6.28448167399509,4.10843828659309,4.93699127315621,2.68540043501222,1.78813219303138,2.16351809135944,2.65841148914239,1.51449674922221,1.82896335972,2.11734988787365,2.82627854145282,2.88635524920988,2.92192255453922,16.3245876202952,4.21773311410723,1.70456327558004,2.85403847818933,2.89784391048286,7.69498149349846,10.9890974560359,26.152942247646,2.50786052017682,15.8130515932779,17.9526842237799,13.7494923225455,14.2638141345261,17.1270629942661,13.5970901530146,19.5756525067224,9.90706647093285,15.406841905463,16.0505696643064,7.26511433089237,7.98049746802062,6.82934423016537,7.05009479498053,6.28839487883947,9.55986243940074,8.66762238426299,6.38708677440572,6.4183841918363,9.34979683526051,7.35089969681695,7.54505365544305,6.367622507952,8.38729496503788,7.06456268154043,9.0495801343784,7.06894388263618,4.62982129112892,4.94503080963968,6.62395140604788,8.22886205724997,6.92155644021416,7.15308569841963,6.54058874845478,7.62285981364178,5.92302255241735,6.58540702341981,6.83981249738391,5.70377278152619,14.0285567914435,7.47400614182297,7.09232273104057,8.18462086339379,6.50734732981057,9.06661071611365,12.4905288968973,6.55008503647143,11.3881658645598,6.31251495827183,8.38247392654159,6.26043156175138
|short_description=p1@Ttc39c
}}

Latest revision as of 01:37, 27 September 2015

Short description:p1@Ttc39c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ttc39c_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: 209bp_to_NM_028341, uc008eci.2, uc008ecj.2_5end
EntrezGene:Ttc39c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ttc39c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I653.69
CD326+ enterocyte, pool1.CNhs13542.11848-124I383.18
CD326+ enterocyte, pool2.CNhs13197.11849-124I4104.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.24
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I214.01
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C118.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.90
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D95.53
Mouse Schwann, donor2.CNhs12573.11746-123F910.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C467.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C839.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F459.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F644.35
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.29
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D713.21
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D628.32
adrenal gland, embryo E17.CNhs11043.1263-45I132.29
adrenal gland, embryo E18.CNhs11026.1262-18F528.03
adrenal gland, neonate N00.CNhs11191.1311-23C118.58
adrenal gland, neonate N25.CNhs11223.1377-27I313.07
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B236.89
cerebellum, neonate N30.CNhs11135.1395-42I241.05
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.04
corpora quadrigemina, adult.CNhs10501.16-22A429.51
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D520.51
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F221.40
diencephalon, neonate N30.CNhs11201.1388-42B225.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G425.04
eyeball, embryo E12.CNhs11016.345-16C67.16
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A233.89
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E28.97
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.18
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E841.64
hippocampus, neonate N00.CNhs11228.627-43G112.55
intestinal mucosa, adult.CNhs10506.860-29I348.90
intestine, adult.CNhs10496.178-9A329.62
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D39.56
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E918.61
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F215.72
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E322.69
intestine, neonate N30.CNhs11131.1384-42G124.49
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F86.97
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.47
kidney, neonate N10.CNhs11206.758-6D53.67
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B255.73
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G424.45
liver, neonate N00.CNhs11117.641-24F434.53
liver, neonate N03.CNhs11123.1345-25G224.99
liver, neonate N06.CNhs11101.684-20A858.94
liver, neonate N07.CNhs11103.716-20H237.96
liver, neonate N10.CNhs11115.751-24B945.87
liver, neonate N20.CNhs11220.823-25A358.09
liver, neonate N25.CNhs11198.1368-26H149.69
liver, neonate N30.CNhs11106.1382-42D157.41
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C224.40
medulla oblongata, neonate N30.CNhs11200.1396-42A327.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I981.29
ovary, adult.CNhs10507.91-2I713.91
ovary, embryo E18.CNhs11040.505-44H78.19
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F58.39
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G413.08
skin, neonate N03.CNhs11215.662-22H39.59
skin, neonate N06.CNhs11097.693-20I59.91
skin, neonate N10.CNhs11108.762-6C413.30
small intestine, neonate N16.CNhs11114.790-21I123.61
spinal cord, adult.CNhs10505.24-13C920.58
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A910.50
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I111.41
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F512.26
testis, embryo E15.CNhs11034.443-27C513.90
testis, embryo E16.CNhs11033.470-26G517.70
testis, embryo E17.CNhs11029.486-18I516.92
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B723.35
testis, neonate N07.CNhs11222.726-26I425.39
testis, neonate N10.CNhs11204.763-44D926.95
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B416.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E510.99
vagina, adult.CNhs10502.89-27D526.15
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I87.27
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.38e-0823
neuroblast (sensu Vertebrata)4.38e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.04e-1054
central nervous system2.92e-1073
nervous system5.53e-1075
ectoderm-derived structure8.32e-1095
ectoderm8.32e-1095
presumptive ectoderm8.32e-1095
neural tube2.15e-0952
neural rod2.15e-0952
future spinal cord2.15e-0952
neural keel2.15e-0952
neurectoderm4.82e-0964
neural plate4.82e-0964
presumptive neural plate4.82e-0964
ecto-epithelium1.15e-0873
gray matter3.23e-0834
brain3.81e-0847
future brain3.81e-0847
regional part of brain1.25e-0746
brain grey matter8.81e-0729
regional part of telencephalon8.81e-0729
telencephalon8.81e-0729
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