FFCP PHASE1:Mm9::chr1:22812882..22812941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=116837 | |EntrezGene=116837 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9PWP6,Q99NE5,Q6BCW5 | |UniProt=E9PWP6,Q99NE5,Q6BCW5 | ||
|association_with_transcript=-319bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end | |association_with_transcript=-319bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end | ||
|cluster_id=chr1:22812882..22812941,- | |||
|description=CAGE_peak_1_at_Rims1_5end | |description=CAGE_peak_1_at_Rims1_5end | ||
|id=chr1:22812882..22812941,- | |id=chr1:22812882..22812941,- | ||
|ontology_enrichment_celltype=CL:0000540!6.70e-11!33;CL:0000047!6.70e-11!33;CL:0000031!6.70e-11!33;CL:0000404!6.70e-11!33;CL:0000117!1.84e-10!23;CL:0000337!1.84e-10!23;CL:0000393!2.06e-07!39;CL:0000211!2.06e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-12,23;CL:0000337,9.63e-12,23;CL:0000540,9.13e-11,33;CL:0000047,9.13e-11,33;CL:0000031,9.13e-11,33;CL:0000404,9.13e-11,33;CL:0000393,1.52e-07,39;CL:0000211,1.52e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.73e-22!73;UBERON:0005743!6.73e-22!73;UBERON:0002346!7.49e-22!71;UBERON:0003075!7.49e-22!71;UBERON:0007284!7.49e-22!71;UBERON:0000033!4.86e-21!63;UBERON:0000073!6.43e-21!75;UBERON:0001016!6.43e-21!75;UBERON:0001049!1.54e-19!52;UBERON:0005068!1.54e-19!52;UBERON:0006241!1.54e-19!52;UBERON:0007135!1.54e-19!52;UBERON:0003056!6.90e-19!49;UBERON:0000955!6.90e-19!50;UBERON:0006238!6.90e-19!50;UBERON:0004121!2.11e-18!102;UBERON:0000924!2.11e-18!102;UBERON:0006601!2.11e-18!102;UBERON:0002616!2.81e-18!49;UBERON:0002020!5.09e-16!34;UBERON:0003080!2.37e-15!40;UBERON:0002780!9.70e-15!39;UBERON:0001890!9.70e-15!39;UBERON:0006240!9.70e-15!39;UBERON:0002791!1.36e-13!29;UBERON:0003528!1.36e-13!29;UBERON:0001893!1.36e-13!29;UBERON:0000956!2.89e-09!21;UBERON:0001869!2.89e-09!21;UBERON:0000203!2.89e-09!21;UBERON:0000468!6.54e-09!333;UBERON:0000153!6.84e-09!94;UBERON:0000025!7.46e-09!114;UBERON:0007811!1.46e-08!86;UBERON:0002021!2.56e-08!10;UBERON:0000411!2.56e-08!10;UBERON:0001950!2.56e-08!10;UBERON:0002619!4.25e-08!17;UBERON:0004111!1.64e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.47e-26,64;UBERON:0003075,3.47e-26,64;UBERON:0007284,3.47e-26,64;UBERON:0001017,2.11e-22,73;UBERON:0000073,2.15e-22,54;UBERON:0010371,3.55e-21,73;UBERON:0001016,3.81e-21,75;UBERON:0001049,7.78e-21,52;UBERON:0005068,7.78e-21,52;UBERON:0006241,7.78e-21,52;UBERON:0007135,7.78e-21,52;UBERON:0003056,6.48e-20,49;UBERON:0004121,1.40e-19,95;UBERON:0000924,1.40e-19,95;UBERON:0006601,1.40e-19,95;UBERON:0010314,1.55e-19,92;UBERON:0002020,7.58e-18,34;UBERON:0000955,7.76e-18,47;UBERON:0006238,7.76e-18,47;UBERON:0002616,3.88e-17,46;UBERON:0003080,1.12e-15,40;UBERON:0002780,5.78e-15,39;UBERON:0001890,5.78e-15,39;UBERON:0006240,5.78e-15,39;UBERON:0003528,6.57e-15,29;UBERON:0002791,6.57e-15,29;UBERON:0001893,6.57e-15,29;UBERON:0002021,7.99e-10,10;UBERON:0000411,7.99e-10,10;UBERON:0001950,7.99e-10,10;UBERON:0000956,1.01e-09,21;UBERON:0001869,1.01e-09,21;UBERON:0000203,1.01e-09,21;UBERON:0002619,2.81e-08,17;UBERON:0000025,4.72e-08,114;UBERON:0004111,7.87e-07,122 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,4.45096213891115,5.28990979272033,3.1691570175309,0,0,0,0,0,0.299600110518405,0,1.97010263386108,2.16009501330705,2.52389953621658,3.71346279724945,2.87129103237098,1.83736198822431,2.58782771749238,0.919218786610021,12.1127469099328,16.7270412891596,13.6709814598057,3.69281605644543,4.94033275453012,7.8137005583514,6.97957497503452,10.1297269805702,11.9182633265912,6.77645746589436,6.54909731675874,5.40558392893372,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0.258937883647172,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.60289056221049,0.940709657085638,0.125666591329675,0,0,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,0,35.7192572354088,36.2342802787277,0.766371165625774,0,0,0,15.2786452192919,21.5025283324754,6.78533501409468,30.5930803538407,43.7273432034865,17.8697718321222,18.1710214635889,1.73126918545538,0.870848794270651,0,1.68353484709179,2.21204753036596,2.5289231487682,2.88099407688559,5.12396380641431,4.69451844144162,3.58718416797579,4.02917415606834,3.88055056108524,0.431135985865684,1.89106080167819,2.11141348996739,1.31517439456545,1.39023624612799,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,1.65700618028402,3.75241695969754,2.34080679899319,3.78791576936336,3.54175617145327,2.46827380619805,2.79040733700489,1.07309360559848,0.934122738937356,1.48103864922132,0.656669856316381,0.648550476366846,0.292399974850665,0.219550115291051,0,26.9171134162083,5.9684675179985,0,0,3.41261200856374,3.48355007790658,2.70621668776396,2.42020229548011,0.889512175379481,1.71203063501303,1.42358718463353,0.988193728344065,1.25667604400135,0.596869416123452,0.974820435595601,0,0.432276099749388,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,0.841629838683823,0.442655759869801,0.147610147979602,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0,0.50925170356284,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,3.03186258832776,3.25929952884052,3.39490171550376,2.81628297946203,0.837531287209079,1.42826184531608,0.585400943573396,3.4679731703362,1.99318220683897,3.6674596791222,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,8.83028244932856,13.0104972117346,0,0.252470927204373,1.57754109708128,2.34263246577983,2.15423397732799,0.955875191810208,0.668396022247182,0.849229592366497,1.21443210502468,1.16902343164525,1.97643888973262,10.9249247583414,1.70328102249922,0.534196811001766,1.46598263418218,0.989820737835213,0,1.21390318077491,1.209294227859,1.50884063804718,0,0,0.258428293168221,1.81766864738753,1.06949213515416,0.948110273807448,0,0,0.680879211507576,1.98067203434441,0.905510786479282,1.28602221018955,1.95074257006501,3.21063871683727,2.13913726782757,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.542816324353403,0.238744688006273,0.492422699235184,0.291480836629851,8.90041449650446,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,2.84702394223022,1.21991680276109,2.16010681643603,0.836353184057875,1.09181281873089,1.34864346384821,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,1.16670713006429,0.387479470433193,1.01373675294467,0.117357238645754,0.5208175393758,1.04859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.915758121336325,0,0,34.4498623996411,28.540164663445,39.5297904273184,32.480251462957,46.5856113444037,37.769694869485,37.1262375127493,32.8734478353681,40.3296743995942,42.9741058754011,1.55681021376265,1.59609949360412,1.36586884603307,2.18796045361465,1.67690530102386,2.20612210140017,1.77797382241292,3.09052585858341,3.53011130550997,2.02157769411038,1.52087579934144,3.2066478035633,2.1537546718073,1.53660365771686,2.5845961030026,3.81034953026459,2.78122382267653,4.05109362973781,2.88460130562315,2.50238164228475,3.77156177623957,3.01708870470874,2.62279808942053,2.0348498328526,2.82328141245992,2.28459441307527,2.37806364734604,2.63069711437843,2.71608227691724,2.24456908663095,1.30498519936592,1.97008964751127,2.04615521584845,1.23949472948773,1.92906610981141,1.99848462350357,2.33931608445408,1.28922632428979,0.765153328275374,1.76473135295612,0.695603506861264 | |phase1_expression=3.84357233051505,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,4.45096213891115,5.28990979272033,3.1691570175309,0,0,0,0,0,0.299600110518405,0,1.97010263386108,2.16009501330705,2.52389953621658,3.71346279724945,2.87129103237098,1.83736198822431,2.58782771749238,0.919218786610021,12.1127469099328,16.7270412891596,13.6709814598057,3.69281605644543,4.94033275453012,7.8137005583514,6.97957497503452,10.1297269805702,11.9182633265912,6.77645746589436,6.54909731675874,5.40558392893372,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0.258937883647172,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.60289056221049,0.940709657085638,0.125666591329675,0,0,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,0,35.7192572354088,36.2342802787277,0.766371165625774,0,0,0,15.2786452192919,21.5025283324754,6.78533501409468,30.5930803538407,43.7273432034865,17.8697718321222,18.1710214635889,1.73126918545538,0.870848794270651,0,1.68353484709179,2.21204753036596,2.5289231487682,2.88099407688559,5.12396380641431,4.69451844144162,3.58718416797579,4.02917415606834,3.88055056108524,0.431135985865684,1.89106080167819,2.11141348996739,1.31517439456545,1.39023624612799,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,1.65700618028402,3.75241695969754,2.34080679899319,3.78791576936336,3.54175617145327,2.46827380619805,2.79040733700489,1.07309360559848,0.934122738937356,1.48103864922132,0.656669856316381,0.648550476366846,0.292399974850665,0.219550115291051,0,26.9171134162083,5.9684675179985,0,0,3.41261200856374,3.48355007790658,2.70621668776396,2.42020229548011,0.889512175379481,1.71203063501303,1.42358718463353,0.988193728344065,1.25667604400135,0.596869416123452,0.974820435595601,0,0.432276099749388,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,0.841629838683823,0.442655759869801,0.147610147979602,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0,0.50925170356284,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,3.03186258832776,3.25929952884052,3.39490171550376,2.81628297946203,0.837531287209079,1.42826184531608,0.585400943573396,3.4679731703362,1.99318220683897,3.6674596791222,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,8.83028244932856,13.0104972117346,0,0.252470927204373,1.57754109708128,2.34263246577983,2.15423397732799,0.955875191810208,0.668396022247182,0.849229592366497,1.21443210502468,1.16902343164525,1.97643888973262,10.9249247583414,1.70328102249922,0.534196811001766,1.46598263418218,0.989820737835213,0,1.21390318077491,1.209294227859,1.50884063804718,0,0,0.258428293168221,1.81766864738753,1.06949213515416,0.948110273807448,0,0,0.680879211507576,1.98067203434441,0.905510786479282,1.28602221018955,1.95074257006501,3.21063871683727,2.13913726782757,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.542816324353403,0.238744688006273,0.492422699235184,0.291480836629851,8.90041449650446,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,2.84702394223022,1.21991680276109,2.16010681643603,0.836353184057875,1.09181281873089,1.34864346384821,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,1.16670713006429,0.387479470433193,1.01373675294467,0.117357238645754,0.5208175393758,1.04859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.915758121336325,0,0,34.4498623996411,28.540164663445,39.5297904273184,32.480251462957,46.5856113444037,37.769694869485,37.1262375127493,32.8734478353681,40.3296743995942,42.9741058754011,1.55681021376265,1.59609949360412,1.36586884603307,2.18796045361465,1.67690530102386,2.20612210140017,1.77797382241292,3.09052585858341,3.53011130550997,2.02157769411038,1.52087579934144,3.2066478035633,2.1537546718073,1.53660365771686,2.5845961030026,3.81034953026459,2.78122382267653,4.05109362973781,2.88460130562315,2.50238164228475,3.77156177623957,3.01708870470874,2.62279808942053,2.0348498328526,2.82328141245992,2.28459441307527,2.37806364734604,2.63069711437843,2.71608227691724,2.24456908663095,1.30498519936592,1.97008964751127,2.04615521584845,1.23949472948773,1.92906610981141,1.99848462350357,2.33931608445408,1.28922632428979,0.765153328275374,1.76473135295612,0.695603506861264 | ||
|short_description=p1@Rims1 | |short_description=p1@Rims1 | ||
}} | }} |
Latest revision as of 01:12, 27 September 2015
Short description: | p1@Rims1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rims1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -319bp_to_ENSMUST00000097808, NM_001012623, NM_001012624, NM_001012625, NM_053270, NM_183018, uc007als.1, uc007alt.1, uc007alu.1, uc007alv.1, uc007alw.1, uc007aly.1_5end |
EntrezGene: | Rims1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.63e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.63e-12 | 23 |
neuron | 9.13e-11 | 33 |
neuronal stem cell | 9.13e-11 | 33 |
neuroblast | 9.13e-11 | 33 |
electrically signaling cell | 9.13e-11 | 33 |
electrically responsive cell | 1.52e-07 | 39 |
electrically active cell | 1.52e-07 | 39 |