FFCP PHASE1:Mm9::chr13:101421208..101421219,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:101421208..101421219,- to FFCP PHASE1:Mm9::chr13:101421208..101421219,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19356 | |EntrezGene=19356 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NXW6,Q3UYY2 | |UniProt=Q6NXW6,Q3UYY2 | ||
|association_with_transcript=-194bp_to_ENSMUST00000022136,NM_001044371,NM_011233,uc007rrc.1,uc007rrd.1,uc007rre.1_5end | |||
|cluster_id=chr13:101421208..101421219,- | |||
|description=CAGE_peak_3_at_Rad17_5end | |||
|id=chr13:101421208..101421219,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.69e-14,1;CL:0002078,8.69e-14,1;CL:0000115,8.69e-14,1;CL:0002262,8.69e-14,1;CL:1000398,8.69e-14,1;CL:0000708,1.76e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,8.69e-14,1;UBERON:0001281,8.69e-14,1;UBERON:0000353,8.69e-14,1;UBERON:0003497,8.69e-14,1;UBERON:0003909,8.69e-14,1;UBERON:0003928,8.69e-14,1;UBERON:0003835,8.69e-14,1;UBERON:0003513,8.69e-14,1;UBERON:0001280,8.69e-14,1;UBERON:0004647,8.69e-14,1;UBERON:0002294,8.69e-14,1;UBERON:0001173,8.69e-14,1;UBERON:0004912,8.69e-14,1;UBERON:0005171,8.69e-14,1;UBERON:0000473,6.83e-09,14;UBERON:0003135,2.43e-08,15;UBERON:0003101,7.36e-08,16;UBERON:0000079,7.36e-08,16;UBERON:0003210,1.76e-07,2;UBERON:0004176,1.96e-07,17;UBERON:0009196,1.96e-07,17;UBERON:0009117,1.96e-07,17;UBERON:0000991,4.71e-07,18;UBERON:0005564,4.71e-07,18 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.129123323441576,0.281577444303333,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.53077922271926,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,1.77858959222228,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0,0,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.599075622529601,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0.459804208866946,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0.696504333044333,0.411564272815887,0.796137067273973,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.763877555344259,0,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0.472905432318573,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.679913719975421,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,11.837551712368,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.781226309063701,0.838874755405687,3.14059357073808,4.32045009386798,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.129123323441576,0.281577444303333,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.53077922271926,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,1.77858959222228,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0,0,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.599075622529601,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0.459804208866946,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0.696504333044333,0.411564272815887,0.796137067273973,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.763877555344259,0,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0.472905432318573,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.679913719975421,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,11.837551712368,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.781226309063701,0.838874755405687,3.14059357073808,4.32045009386798,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p3@Rad17 | |||
}} | }} |
Latest revision as of 01:09, 27 September 2015
Short description: | p3@Rad17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rad17_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -194bp_to_ENSMUST00000022136, NM_001044371, NM_011233, uc007rrc.1, uc007rrd.1, uc007rre.1_5end |
EntrezGene: | Rad17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.69e-14 | 1 |
meso-epithelial cell | 8.69e-14 | 1 |
endothelial cell | 8.69e-14 | 1 |
endothelial cell of sinusoid | 8.69e-14 | 1 |
endothelial cell of hepatic sinusoid | 8.69e-14 | 1 |
leptomeningeal cell | 1.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bile duct | 8.69e-14 | 1 |
hepatic sinusoid | 8.69e-14 | 1 |
parenchyma | 8.69e-14 | 1 |
abdomen blood vessel | 8.69e-14 | 1 |
sinusoid | 8.69e-14 | 1 |
digestive system duct | 8.69e-14 | 1 |
abdominal segment blood vessel | 8.69e-14 | 1 |
trunk blood vessel | 8.69e-14 | 1 |
liver parenchyma | 8.69e-14 | 1 |
liver lobule | 8.69e-14 | 1 |
biliary system | 8.69e-14 | 1 |
biliary tree | 8.69e-14 | 1 |
biliary bud | 8.69e-14 | 1 |
hepatic duct | 8.69e-14 | 1 |
testis | 6.83e-09 | 14 |
male reproductive organ | 2.43e-08 | 15 |
male organism | 7.36e-08 | 16 |
male reproductive system | 7.36e-08 | 16 |
blood-cerebrospinal fluid barrier | 1.76e-07 | 2 |
external genitalia | 1.96e-07 | 17 |
indifferent external genitalia | 1.96e-07 | 17 |
indifferent gonad | 1.96e-07 | 17 |
gonad | 4.71e-07 | 18 |
gonad primordium | 4.71e-07 | 18 |