FFCP PHASE1:Mm9::chr13:100670600..100670624,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr13:100670600..100670624,- to FFCP PHASE1:Mm9::chr13:100670600..100670624,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27220 | |EntrezGene=27220 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=P56388,Q3UYI4 | |UniProt=P56388,Q3UYI4 | ||
|association_with_transcript=13bp_to_ENSMUST00000022150,NM_001081493,NM_013732,uc007rpw.1,uc007rpx.1_5end | |||
|cluster_id=chr13:100670600..100670624,- | |||
|description=CAGE_peak_1_at_Cartpt_5end | |||
|id=chr13:100670600..100670624,- | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-09!33;CL:0000047!1.42e-09!33;CL:0000031!1.42e-09!33;CL:0000404!1.42e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.55e-12,33;CL:0000047,8.55e-12,33;CL:0000031,8.55e-12,33;CL:0000404,8.55e-12,33;CL:0000393,2.18e-08,39;CL:0000211,2.18e-08,39;CL:0002319,2.97e-08,43;CL:0000221,7.82e-08,44;CL:0000133,7.82e-08,44;CL:0000117,9.58e-08,23;CL:0000337,9.58e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.93e-15!71;UBERON:0003075!6.93e-15!71;UBERON:0007284!6.93e-15!71;UBERON:0000073!7.68e-15!75;UBERON:0001016!7.68e-15!75;UBERON:0004121!8.98e-15!102;UBERON:0000924!8.98e-15!102;UBERON:0006601!8.98e-15!102;UBERON:0001017!4.51e-14!73;UBERON:0005743!4.51e-14!73;UBERON:0003056!8.94e-09!49;UBERON:0001049!8.99e-09!52;UBERON:0005068!8.99e-09!52;UBERON:0006241!8.99e-09!52;UBERON:0007135!8.99e-09!52;UBERON:0000033!5.48e-08!63;UBERON:0000955!9.83e-08!50;UBERON:0006238!9.83e-08!50;UBERON:0002616!1.77e-07!49;UBERON:0003080!4.22e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.83e-17,75;UBERON:0001017,2.31e-16,73;UBERON:0004121,4.92e-14,95;UBERON:0000924,4.92e-14,95;UBERON:0006601,4.92e-14,95;UBERON:0002346,4.72e-13,64;UBERON:0003075,4.72e-13,64;UBERON:0007284,4.72e-13,64;UBERON:0000073,1.00e-11,54;UBERON:0001049,2.78e-10,52;UBERON:0005068,2.78e-10,52;UBERON:0006241,2.78e-10,52;UBERON:0007135,2.78e-10,52;UBERON:0010371,1.89e-09,73;UBERON:0003056,4.98e-09,49;UBERON:0010314,1.25e-08,92;UBERON:0003080,9.12e-08,40;UBERON:0000955,3.05e-07,47;UBERON:0006238,3.05e-07,47;UBERON:0002780,3.53e-07,39;UBERON:0001890,3.53e-07,39;UBERON:0006240,3.53e-07,39;UBERON:0002020,4.13e-07,34;UBERON:0000010,4.16e-07,11;UBERON:0002616,5.86e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9019242778223,14.2827564403449,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,44.8472045513972,27.1668305370485,0,0,0,204.815538658863,94.4886301830389,216.277998824791,10.0233578674947,8.23388792421687,6.77187381723788,37.1313388671837,148.569329048363,63.7168693229298,19.4454866412621,16.2303716110977,29.0783135487469,4.16494063332512,12.2425927372993,0,0,0,0,0,0,12.9208866521212,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,4.45326417194474,21.8591511725331,12.1786191324856,12.6838523490832,22.0055055206829,17.9910721917628,4.02133092254962,0,0,0,0.323533699894818,0,0,5.59175283654366,0,0,1.02182822083437,0,0,0,37.148078572396,9.60751265919116,0.502617408451458,10.2556348913443,6.39288643325826,99.5304733440293,43.1561759760235,0,0,0,1386.39094658009,0,0.689706313300419,0.540186389416048,2.86339153887859,3.87808045162569,5.25266253167884,10.5882948752494,726.180361664417,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0,0.154267112887378,0,0.268273401399619,0.583826711835847,0.658239399653922,0.492502392237286,0.243206428637567,0,0,0.671032093801859,1.47202963994889,0.102904612379284,0.330418782983798,1.05780226665418,16.8497717922835,17.1855137176724,6.82997545007095,6.6555563125703,5.55945109612176,7.22857379227725,4.2707615539006,8.72904460037258,6.53471542880701,6.16765063327568,5.06906626509712,2.69645822596266,2.37751854862164,2.78797782556114,0.569003702859245,2.28497025219458,0,0,0.581857461502877,0.140271639780637,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,6.44270800019648,0,0.509235257325564,0.234690248288502,0,0.714130922658041,0.780534591431195,0.945810864637146,0.221464689648775,0.637819074629948,1.14704320301017,0.518054945597687,0,0,0,0,0,9.63303539926752,7.85318300167761,0,0,10.0962630213202,9.37052986311932,11.6328634775711,15.5329718669159,11.8083297263669,12.7384438854975,8.50102473517278,22.2114452012597,9.48690667071656,4.81981974632711,0.141940085208269,0.178065603667255,0,0.164970122972535,0,14.5668381692989,12.09294227859,1.69744571780308,2.36241514304618,3.99665692327106,2.58428293168221,1.45413491791002,0,1.58018378967908,0,0,0.680879211507576,0.540183282093931,2.19909762430683,13.7175702420219,11.1724347194632,9.98865378571595,12.176627524557,24.3571959291679,0,0.21183207086382,7.71849393192367,0,0,0.0603129249281559,0,0,2.62332752966866,18.17167959703,0,0,0,0,0,0,0,0,0.138199973804424,22.9120948323627,24.0415355121663,9.14937602070819,18.1448972580626,16.0997987931141,24.2382445758257,23.7361249637284,26.6144127435582,18.5846718808661,5.31421390496351,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.810900861160657,0.410843828659309,0,0.358053391334963,0.39736270956253,0,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,6.37525660306228,0,0,0.428736758158132,0,12.4245405375755,13.8097570952153,13.1765968091061,21.1379414282736,6.16574267793578,6.0431511791176,4.72515750162264,2.70192721934532,3.62513927187364,3.10656187051092,1.45302286617847,6.3843979744165,3.92687293234509,0.243106717068294,0.838452650511929,2.20612210140017,1.55572709461131,1.03017528619447,2.88827288632634,3.28506375292937,1.77435509923168,1.50901073108861,1.77918864192777,1.98477972455095,1.32101578597911,2.85776214769844,1.85414921511769,0.964546102318525,2.06042950401653,2.79677948255355,1.02860775715625,2.12970967391205,1.43061713968393,2.18019624948493,1.31753132581463,1.94613598150856,2.19513567447327,2.36762740294059,1.49384525230448,2.24456908663095,2.01679530811096,2.26560309463796,0.818462086339379,1.70430525304563,2.3148793317737,1.74867404556562,2.33931608445408,2.36358159453128,2.29545998482612,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9019242778223,14.2827564403449,6.97214543856797,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,44.8472045513972,27.1668305370485,0,0,0,204.815538658863,94.4886301830389,216.277998824791,10.0233578674947,8.23388792421687,6.77187381723788,37.1313388671837,148.569329048363,63.7168693229298,19.4454866412621,16.2303716110977,29.0783135487469,4.16494063332512,12.2425927372993,0,0,0,0,0,0,12.9208866521212,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,4.45326417194474,21.8591511725331,12.1786191324856,12.6838523490832,22.0055055206829,17.9910721917628,4.02133092254962,0,0,0,0.323533699894818,0,0,5.59175283654366,0,0,1.02182822083437,0,0,0,37.148078572396,9.60751265919116,0.502617408451458,10.2556348913443,6.39288643325826,99.5304733440293,43.1561759760235,0,0,0,1386.39094658009,0,0.689706313300419,0.540186389416048,2.86339153887859,3.87808045162569,5.25266253167884,10.5882948752494,726.180361664417,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0,0.154267112887378,0,0.268273401399619,0.583826711835847,0.658239399653922,0.492502392237286,0.243206428637567,0,0,0.671032093801859,1.47202963994889,0.102904612379284,0.330418782983798,1.05780226665418,16.8497717922835,17.1855137176724,6.82997545007095,6.6555563125703,5.55945109612176,7.22857379227725,4.2707615539006,8.72904460037258,6.53471542880701,6.16765063327568,5.06906626509712,2.69645822596266,2.37751854862164,2.78797782556114,0.569003702859245,2.28497025219458,0,0,0.581857461502877,0.140271639780637,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,6.44270800019648,0,0.509235257325564,0.234690248288502,0,0.714130922658041,0.780534591431195,0.945810864637146,0.221464689648775,0.637819074629948,1.14704320301017,0.518054945597687,0,0,0,0,0,9.63303539926752,7.85318300167761,0,0,10.0962630213202,9.37052986311932,11.6328634775711,15.5329718669159,11.8083297263669,12.7384438854975,8.50102473517278,22.2114452012597,9.48690667071656,4.81981974632711,0.141940085208269,0.178065603667255,0,0.164970122972535,0,14.5668381692989,12.09294227859,1.69744571780308,2.36241514304618,3.99665692327106,2.58428293168221,1.45413491791002,0,1.58018378967908,0,0,0.680879211507576,0.540183282093931,2.19909762430683,13.7175702420219,11.1724347194632,9.98865378571595,12.176627524557,24.3571959291679,0,0.21183207086382,7.71849393192367,0,0,0.0603129249281559,0,0,2.62332752966866,18.17167959703,0,0,0,0,0,0,0,0,0.138199973804424,22.9120948323627,24.0415355121663,9.14937602070819,18.1448972580626,16.0997987931141,24.2382445758257,23.7361249637284,26.6144127435582,18.5846718808661,5.31421390496351,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.810900861160657,0.410843828659309,0,0.358053391334963,0.39736270956253,0,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,6.37525660306228,0,0,0.428736758158132,0,12.4245405375755,13.8097570952153,13.1765968091061,21.1379414282736,6.16574267793578,6.0431511791176,4.72515750162264,2.70192721934532,3.62513927187364,3.10656187051092,1.45302286617847,6.3843979744165,3.92687293234509,0.243106717068294,0.838452650511929,2.20612210140017,1.55572709461131,1.03017528619447,2.88827288632634,3.28506375292937,1.77435509923168,1.50901073108861,1.77918864192777,1.98477972455095,1.32101578597911,2.85776214769844,1.85414921511769,0.964546102318525,2.06042950401653,2.79677948255355,1.02860775715625,2.12970967391205,1.43061713968393,2.18019624948493,1.31753132581463,1.94613598150856,2.19513567447327,2.36762740294059,1.49384525230448,2.24456908663095,2.01679530811096,2.26560309463796,0.818462086339379,1.70430525304563,2.3148793317737,1.74867404556562,2.33931608445408,2.36358159453128,2.29545998482612,0.220591419119515,0.463735671240843 | ||
|short_description=p1@Cartpt | |||
}} | }} |
Latest revision as of 00:59, 27 September 2015
Short description: | p1@Cartpt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cartpt_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 13bp_to_ENSMUST00000022150, NM_001081493, NM_013732, uc007rpw.1, uc007rpx.1_5end |
EntrezGene: | Cartpt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.55e-12 | 33 |
neuronal stem cell | 8.55e-12 | 33 |
neuroblast | 8.55e-12 | 33 |
electrically signaling cell | 8.55e-12 | 33 |
electrically responsive cell | 2.18e-08 | 39 |
electrically active cell | 2.18e-08 | 39 |
neural cell | 2.97e-08 | 43 |
ectodermal cell | 7.82e-08 | 44 |
neurectodermal cell | 7.82e-08 | 44 |
CNS neuron (sensu Vertebrata) | 9.58e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.58e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.83e-17 | 75 |
central nervous system | 2.31e-16 | 73 |
ectoderm-derived structure | 4.92e-14 | 95 |
ectoderm | 4.92e-14 | 95 |
presumptive ectoderm | 4.92e-14 | 95 |
neurectoderm | 4.72e-13 | 64 |
neural plate | 4.72e-13 | 64 |
presumptive neural plate | 4.72e-13 | 64 |
regional part of nervous system | 1.00e-11 | 54 |
neural tube | 2.78e-10 | 52 |
neural rod | 2.78e-10 | 52 |
future spinal cord | 2.78e-10 | 52 |
neural keel | 2.78e-10 | 52 |
ecto-epithelium | 1.89e-09 | 73 |
pre-chordal neural plate | 4.98e-09 | 49 |
structure with developmental contribution from neural crest | 1.25e-08 | 92 |
anterior neural tube | 9.12e-08 | 40 |
brain | 3.05e-07 | 47 |
future brain | 3.05e-07 | 47 |
regional part of forebrain | 3.53e-07 | 39 |
forebrain | 3.53e-07 | 39 |
future forebrain | 3.53e-07 | 39 |
gray matter | 4.13e-07 | 34 |
peripheral nervous system | 4.16e-07 | 11 |
regional part of brain | 5.86e-07 | 46 |