FFCP PHASE1:Mm9::chr11:116976447..116976500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74136 | |EntrezGene=74136 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=A2A9B9,A8Y5H7,Q99J07,Q9DBQ0 | |UniProt=A2A9B9,A8Y5H7,Q99J07,Q9DBQ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000021177,ENSMUST00000127090,NM_001166506,NM_001166507,NM_028777,NR_029459,uc007mmz.2,uc007mna.2,uc007mnb.2,uc007mnc.2,uc011yih.1_5end | |association_with_transcript=0bp_to_ENSMUST00000021177,ENSMUST00000127090,NM_001166506,NM_001166507,NM_028777,NR_029459,uc007mmz.2,uc007mna.2,uc007mnb.2,uc007mnc.2,uc011yih.1_5end | ||
|cluster_id=chr11:116976447..116976500,+ | |||
|description=CAGE_peak_2_at_Sec14l1_5end | |description=CAGE_peak_2_at_Sec14l1_5end | ||
|id=chr11:116976447..116976500,+ | |id=chr11:116976447..116976500,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.49e-11!43;CL:0000117!4.70e-11!23;CL:0000337!4.70e-11!23;CL:0000221!1.35e-10!44;CL:0000133!1.35e-10!44;CL:0000540!4.00e-09!33;CL:0000047!4.00e-09!33;CL:0000031!4.00e-09!33;CL:0000404!4.00e-09!33;CL:0000055!8.02e-09!50;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39 | |ontology_enrichment_celltype=CL:0002319!3.49e-11!43;CL:0000117!4.70e-11!23;CL:0000337!4.70e-11!23;CL:0000221!1.35e-10!44;CL:0000133!1.35e-10!44;CL:0000540!4.00e-09!33;CL:0000047!4.00e-09!33;CL:0000031!4.00e-09!33;CL:0000404!4.00e-09!33;CL:0000055!8.02e-09!50;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.49e-11,43;CL:0000117,4.70e-11,23;CL:0000337,4.70e-11,23;CL:0000221,1.35e-10,44;CL:0000133,1.35e-10,44;CL:0000540,4.00e-09,33;CL:0000047,4.00e-09,33;CL:0000031,4.00e-09,33;CL:0000404,4.00e-09,33;CL:0000393,1.84e-07,39;CL:0000211,1.84e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.78e-26!73;UBERON:0005743!2.78e-26!73;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0004121!3.67e-22!102;UBERON:0000924!3.67e-22!102;UBERON:0006601!3.67e-22!102;UBERON:0001049!5.39e-22!52;UBERON:0005068!5.39e-22!52;UBERON:0006241!5.39e-22!52;UBERON:0007135!5.39e-22!52;UBERON:0000033!8.59e-22!63;UBERON:0000955!8.93e-22!50;UBERON:0006238!8.93e-22!50;UBERON:0002616!4.53e-21!49;UBERON:0002346!8.55e-21!71;UBERON:0003075!8.55e-21!71;UBERON:0007284!8.55e-21!71;UBERON:0002020!8.48e-19!34;UBERON:0003056!2.62e-18!49;UBERON:0003080!7.77e-17!40;UBERON:0002791!1.13e-16!29;UBERON:0003528!1.13e-16!29;UBERON:0001893!1.13e-16!29;UBERON:0002780!2.06e-16!39;UBERON:0001890!2.06e-16!39;UBERON:0006240!2.06e-16!39;UBERON:0000153!4.53e-16!94;UBERON:0007811!1.54e-15!86;UBERON:0000956!4.34e-14!21;UBERON:0001869!4.34e-14!21;UBERON:0000203!4.34e-14!21;UBERON:0002619!1.04e-11!17;UBERON:0002021!4.69e-08!10;UBERON:0000411!4.69e-08!10;UBERON:0001950!4.69e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.78e-26!73;UBERON:0005743!2.78e-26!73;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0004121!3.67e-22!102;UBERON:0000924!3.67e-22!102;UBERON:0006601!3.67e-22!102;UBERON:0001049!5.39e-22!52;UBERON:0005068!5.39e-22!52;UBERON:0006241!5.39e-22!52;UBERON:0007135!5.39e-22!52;UBERON:0000033!8.59e-22!63;UBERON:0000955!8.93e-22!50;UBERON:0006238!8.93e-22!50;UBERON:0002616!4.53e-21!49;UBERON:0002346!8.55e-21!71;UBERON:0003075!8.55e-21!71;UBERON:0007284!8.55e-21!71;UBERON:0002020!8.48e-19!34;UBERON:0003056!2.62e-18!49;UBERON:0003080!7.77e-17!40;UBERON:0002791!1.13e-16!29;UBERON:0003528!1.13e-16!29;UBERON:0001893!1.13e-16!29;UBERON:0002780!2.06e-16!39;UBERON:0001890!2.06e-16!39;UBERON:0006240!2.06e-16!39;UBERON:0000153!4.53e-16!94;UBERON:0007811!1.54e-15!86;UBERON:0000956!4.34e-14!21;UBERON:0001869!4.34e-14!21;UBERON:0000203!4.34e-14!21;UBERON:0002619!1.04e-11!17;UBERON:0002021!4.69e-08!10;UBERON:0000411!4.69e-08!10;UBERON:0001950!4.69e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.78e-26,73;UBERON:0001016,1.27e-24,75;UBERON:0004121,7.95e-24,95;UBERON:0000924,7.95e-24,95;UBERON:0006601,7.95e-24,95;UBERON:0000073,2.01e-23,54;UBERON:0002346,3.39e-23,64;UBERON:0003075,3.39e-23,64;UBERON:0007284,3.39e-23,64;UBERON:0001049,5.39e-22,52;UBERON:0005068,5.39e-22,52;UBERON:0006241,5.39e-22,52;UBERON:0007135,5.39e-22,52;UBERON:0000955,2.84e-20,47;UBERON:0006238,2.84e-20,47;UBERON:0010371,4.80e-20,73;UBERON:0002616,1.41e-19,46;UBERON:0002020,8.48e-19,34;UBERON:0003056,2.62e-18,49;UBERON:0003080,7.77e-17,40;UBERON:0003528,1.13e-16,29;UBERON:0002791,1.13e-16,29;UBERON:0001893,1.13e-16,29;UBERON:0002780,2.06e-16,39;UBERON:0001890,2.06e-16,39;UBERON:0006240,2.06e-16,39;UBERON:0000956,4.34e-14,21;UBERON:0001869,4.34e-14,21;UBERON:0000203,4.34e-14,21;UBERON:0010314,6.38e-14,92;UBERON:0002619,1.04e-11,17;UBERON:0002021,4.69e-08,10;UBERON:0000411,4.69e-08,10;UBERON:0001950,4.69e-08,10 | |||
|phase1_expression=12.1713123799643,10.1202868215415,11.3749809847384,12.0985684522732,14.0250804384977,5.54001597309236,5.13947809310157,6.19791952519566,24.3564489322383,29.7261948428932,8.21846247482424,5.58405112967355,6.33442700745461,5.85716696207283,10.9926221399169,13.3633676477285,13.9912375625629,4.88966356305268,4.9361196098066,7.63901373236454,60.5508225875617,8.73760370567791,5.74639536105658,4.95976510659561,3.44113921600755,6.89078356938024,5.1691439539089,4.95583835177545,6.65081968097309,6.5527833737582,1.77384408524244,10.7955214488137,9.22597181376855,15.8481681015439,7.22129049378186,5.65197794218874,4.90006455029686,16.3227335987394,15.626706890476,18.3233310390829,26.4704169613956,22.5405010036287,24.2755176515577,16.366586336825,16.5244397887809,10.2786181210542,28.9484797408774,46.0033079962742,40.6419438058773,37.719400420411,30.9369991792051,44.5632949531412,2.85230430298152,4.35217285206807,2.68875039313971,16.9791227783725,15.4728057566929,14.4388185837684,55.6370267363894,55.5440528235635,63.3831403506179,20.6695164562171,21.3430751066673,20.2477436388315,17.7995945262055,19.1829631035447,30.5592112728773,43.4166685013357,65.2207661420324,73.1732185757763,71.7208118208213,29.4220513935918,30.2589901103711,61.1229088082621,67.2835206548019,68.9414089957516,37.4393995397922,36.2632040161933,34.5614699826548,48.7979264601717,48.7629140400843,42.7148963856543,27.6391169011367,16.3201156909187,24.6005178920664,32.9984015730508,31.4641414566017,41.9398753106926,9.84440513331393,10.5044468548432,28.4067198927644,5.16254326188832,1.3599426674155,3.77792234146472,3.24888208723835,4.03224198387602,18.9599967177865,9.37366774179318,9.87186817490901,11.6602059588412,11.2674735821344,19.2489716121477,12.7402619853323,14.2213340630666,6.71122227134764,5.82727690592727,6.0662933401774,14.0446172054444,9.58070169494535,13.0629082377046,17.3485326766136,14.6143429589828,15.4512383161559,17.182381022999,12.9347577849275,18.3473223341326,7.66304399976559,17.0627241165496,10.6153266233985,27.8238981909544,12.8088080707028,19.3950101254089,3.72783522436244,76.4157880200138,72.4685605574554,9.70736809792647,2.87556298814209,5.39912457894067,2.41433431438823,30.7070810779887,73.6575970537989,67.7276957888339,79.4377143278703,79.2717917724025,31.5837827730531,45.4275536589721,13.4427960282417,13.6847667671102,15.1633655060205,28.1992086887875,20.0385482162564,19.7715809812787,20.8872070574205,22.6057226753573,24.2209936978727,23.1885833715578,26.5175880504033,45.2730898793277,22.2035032720827,23.4491539408096,27.8002776179039,23.4539433697505,20.5754964426942,19.1538691587192,18.7261744131229,17.1169469463904,5.61770549850588,2.31613116403244,3.9782889915383,15.5344329401626,16.6513502586578,15.8454614085693,16.3353867553795,14.9540816128027,12.649903256765,12.7893669612724,15.8281306825775,11.0927075248811,15.3040660419537,13.1333971263276,13.5384911941579,12.1345989563026,14.9294078397914,14.6284996448805,78.2278608658553,62.0514812647085,11.5646574044329,7.40461586657924,21.1155368029882,18.1144604051142,9.92279452180119,8.87407508342707,10.0070119730192,6.08722003560189,8.0669940462567,6.91735609840846,3.2673577144035,6.96347652144028,6.23885078781184,11.6846523125049,6.91641759599022,8.56307474993779,16.311439481965,16.4517858158009,11.270773567308,18.5322708339236,19.9771061782655,13.4660774189412,13.7855650930881,8.26616828685772,8.16393384775149,13.3268937035545,3.55743152504579,11.8460025058427,12.1866576970186,14.1663130802458,14.2002084971952,9.16473207059184,9.16653066413111,10.0693648107784,2.91843408195064,4.11842119782122,27.3159592401974,4.46569137202204,3.74445207737473,6.06189307073068,5.20252499213545,3.85954817090694,10.1614254591633,17.6227012946551,15.9705676913185,14.7678224624414,13.1426539041561,12.5629693081362,15.2347930167049,9.56154874503214,13.7142575372386,11.9590932410338,13.7131101045439,9.99566219766002,10.8791538575514,8.96824163205372,16.5870412333199,19.0366989336548,16.2282210096282,18.2118252561123,27.9358026578758,24.3800308111783,23.2787622434879,22.2174415939848,17.9839685067266,18.350620981942,17.4492952163567,20.0733790280144,14.0363164671908,20.9476632783736,17.0020494703456,20.1656541958805,21.7408277870588,93.183181762324,12.0649072427028,21.3678724400706,16.2886959353576,17.4868330350888,14.6019652173959,20.3935734370184,14.2092071773433,15.6542216197395,18.3087173586079,16.6014979889721,10.3371317267288,11.6330793432802,12.1209108650805,15.1697643809192,22.1379078007497,22.6898195146011,18.3837387107046,20.887086907632,19.9212373025442,16.9326257674958,21.9901889716419,26.2202161875044,20.7331765958672,14.0053876592716,12.6722722354404,23.3015277950202,16.5396298541221,14.0153315000258,15.1776561094151,18.0335645535186,17.9058516004705,15.7575263755259,4.95517422270746,22.9927374493032,12.4735742982432,16.5109494370578,11.6672552242918,13.5625289043378,10.66214976224,13.0403558727718,3.73952545986482,3.77868921273877,3.17859939750175,16.2294005062569,17.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| |phase1_expression=12.1713123799643,10.1202868215415,11.3749809847384,12.0985684522732,14.0250804384977,5.54001597309236,5.13947809310157,6.19791952519566,24.3564489322383,29.7261948428932,8.21846247482424,5.58405112967355,6.33442700745461,5.85716696207283,10.9926221399169,13.3633676477285,13.9912375625629,4.88966356305268,4.9361196098066,7.63901373236454,60.5508225875617,8.73760370567791,5.74639536105658,4.95976510659561,3.44113921600755,6.89078356938024,5.1691439539089,4.95583835177545,6.65081968097309,6.5527833737582,1.77384408524244,10.7955214488137,9.22597181376855,15.8481681015439,7.22129049378186,5.65197794218874,4.90006455029686,16.3227335987394,15.626706890476,18.3233310390829,26.4704169613956,22.5405010036287,24.2755176515577,16.366586336825,16.5244397887809,10.2786181210542,28.9484797408774,46.0033079962742,40.6419438058773,37.719400420411,30.9369991792051,44.5632949531412,2.85230430298152,4.35217285206807,2.68875039313971,16.9791227783725,15.4728057566929,14.4388185837684,55.6370267363894,55.5440528235635,63.3831403506179,20.6695164562171,21.3430751066673,20.2477436388315,17.7995945262055,19.1829631035447,30.5592112728773,43.4166685013357,65.2207661420324,73.1732185757763,71.7208118208213,29.4220513935918,30.2589901103711,61.1229088082621,67.2835206548019,68.9414089957516,37.4393995397922,36.2632040161933,34.5614699826548,48.7979264601717,48.7629140400843,42.7148963856543,27.6391169011367,16.3201156909187,24.6005178920664,32.9984015730508,31.4641414566017,41.9398753106926,9.84440513331393,10.5044468548432,28.4067198927644,5.16254326188832,1.3599426674155,3.77792234146472,3.24888208723835,4.03224198387602,18.9599967177865,9.37366774179318,9.87186817490901,11.6602059588412,11.2674735821344,19.2489716121477,12.7402619853323,14.2213340630666,6.71122227134764,5.82727690592727,6.0662933401774,14.0446172054444,9.58070169494535,13.0629082377046,17.3485326766136,14.6143429589828,15.4512383161559,17.182381022999,12.9347577849275,18.3473223341326,7.66304399976559,17.0627241165496,10.6153266233985,27.8238981909544,12.8088080707028,19.3950101254089,3.72783522436244,76.4157880200138,72.4685605574554,9.70736809792647,2.87556298814209,5.39912457894067,2.41433431438823,30.7070810779887,73.6575970537989,67.7276957888339,79.4377143278703,79.2717917724025,31.5837827730531,45.4275536589721,13.4427960282417,13.6847667671102,15.1633655060205,28.1992086887875,20.0385482162564,19.7715809812787,20.8872070574205,22.6057226753573,24.2209936978727,23.1885833715578,26.5175880504033,45.2730898793277,22.2035032720827,23.4491539408096,27.8002776179039,23.4539433697505,20.5754964426942,19.1538691587192,18.7261744131229,17.1169469463904,5.61770549850588,2.31613116403244,3.9782889915383,15.5344329401626,16.6513502586578,15.8454614085693,16.3353867553795,14.9540816128027,12.649903256765,12.7893669612724,15.8281306825775,11.0927075248811,15.3040660419537,13.1333971263276,13.5384911941579,12.1345989563026,14.9294078397914,14.6284996448805,78.2278608658553,62.0514812647085,11.5646574044329,7.40461586657924,21.1155368029882,18.1144604051142,9.92279452180119,8.87407508342707,10.0070119730192,6.08722003560189,8.0669940462567,6.91735609840846,3.2673577144035,6.96347652144028,6.23885078781184,11.6846523125049,6.91641759599022,8.56307474993779,16.311439481965,16.4517858158009,11.270773567308,18.5322708339236,19.9771061782655,13.4660774189412,13.7855650930881,8.26616828685772,8.16393384775149,13.3268937035545,3.55743152504579,11.8460025058427,12.1866576970186,14.1663130802458,14.2002084971952,9.16473207059184,9.16653066413111,10.0693648107784,2.91843408195064,4.11842119782122,27.3159592401974,4.46569137202204,3.74445207737473,6.06189307073068,5.20252499213545,3.85954817090694,10.1614254591633,17.6227012946551,15.9705676913185,14.7678224624414,13.1426539041561,12.5629693081362,15.2347930167049,9.56154874503214,13.7142575372386,11.9590932410338,13.7131101045439,9.99566219766002,10.8791538575514,8.96824163205372,16.5870412333199,19.0366989336548,16.2282210096282,18.2118252561123,27.9358026578758,24.3800308111783,23.2787622434879,22.2174415939848,17.9839685067266,18.350620981942,17.4492952163567,20.0733790280144,14.0363164671908,20.9476632783736,17.0020494703456,20.1656541958805,21.7408277870588,93.183181762324,12.0649072427028,21.3678724400706,16.2886959353576,17.4868330350888,14.6019652173959,20.3935734370184,14.2092071773433,15.6542216197395,18.3087173586079,16.6014979889721,10.3371317267288,11.6330793432802,12.1209108650805,15.1697643809192,22.1379078007497,22.6898195146011,18.3837387107046,20.887086907632,19.9212373025442,16.9326257674958,21.9901889716419,26.2202161875044,20.7331765958672,14.0053876592716,12.6722722354404,23.3015277950202,16.5396298541221,14.0153315000258,15.1776561094151,18.0335645535186,17.9058516004705,15.7575263755259,4.95517422270746,22.9927374493032,12.4735742982432,16.5109494370578,11.6672552242918,13.5625289043378,10.66214976224,13.0403558727718,3.73952545986482,3.77868921273877,3.17859939750175,16.2294005062569,17.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| ||
|short_description=p2@Sec14l1 | |short_description=p2@Sec14l1 | ||
}} | }} |
Latest revision as of 00:50, 27 September 2015
Short description: | p2@Sec14l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sec14l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000021177, ENSMUST00000127090, NM_001166506, NM_001166507, NM_028777, NR_029459, uc007mmz.2, uc007mna.2, uc007mnb.2, uc007mnc.2, uc011yih.1_5end |
EntrezGene: | Sec14l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.49e-11 | 43 |
CNS neuron (sensu Vertebrata) | 4.70e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.70e-11 | 23 |
ectodermal cell | 1.35e-10 | 44 |
neurectodermal cell | 1.35e-10 | 44 |
neuron | 4.00e-09 | 33 |
neuronal stem cell | 4.00e-09 | 33 |
neuroblast | 4.00e-09 | 33 |
electrically signaling cell | 4.00e-09 | 33 |
electrically responsive cell | 1.84e-07 | 39 |
electrically active cell | 1.84e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.78e-26 | 73 |
nervous system | 1.27e-24 | 75 |
ectoderm-derived structure | 7.95e-24 | 95 |
ectoderm | 7.95e-24 | 95 |
presumptive ectoderm | 7.95e-24 | 95 |
regional part of nervous system | 2.01e-23 | 54 |
neurectoderm | 3.39e-23 | 64 |
neural plate | 3.39e-23 | 64 |
presumptive neural plate | 3.39e-23 | 64 |
neural tube | 5.39e-22 | 52 |
neural rod | 5.39e-22 | 52 |
future spinal cord | 5.39e-22 | 52 |
neural keel | 5.39e-22 | 52 |
brain | 2.84e-20 | 47 |
future brain | 2.84e-20 | 47 |
ecto-epithelium | 4.80e-20 | 73 |
regional part of brain | 1.41e-19 | 46 |
gray matter | 8.48e-19 | 34 |
pre-chordal neural plate | 2.62e-18 | 49 |
anterior neural tube | 7.77e-17 | 40 |
brain grey matter | 1.13e-16 | 29 |
regional part of telencephalon | 1.13e-16 | 29 |
telencephalon | 1.13e-16 | 29 |
regional part of forebrain | 2.06e-16 | 39 |
forebrain | 2.06e-16 | 39 |
future forebrain | 2.06e-16 | 39 |
cerebral cortex | 4.34e-14 | 21 |
cerebral hemisphere | 4.34e-14 | 21 |
pallium | 4.34e-14 | 21 |
structure with developmental contribution from neural crest | 6.38e-14 | 92 |
regional part of cerebral cortex | 1.04e-11 | 17 |
occipital lobe | 4.69e-08 | 10 |
visual cortex | 4.69e-08 | 10 |
neocortex | 4.69e-08 | 10 |