FFCP PHASE1:Mm9::chr6:29311410..29311425,+: Difference between revisions
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{{FFCP|EntrezGene=12321|HGNC=|MCL_coexpression_id=5|UniProt=G3UXA8|association_with_transcript=-35bp_to_ENSMUST00000156163_5end|description=CAGE_peak_5_at_Calu_5end|id=chr6:29311410..29311425,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.39e-09!18;UBERON:0000948!7.39e-09!18;UBERON:0005498!7.39e-09!18;UBERON:0004140!7.39e-09!18;UBERON:0009881!7.39e-09!18;UBERON:0004141!7.39e-09!18;UBERON:0003084!7.39e-09!18;UBERON:0007005!7.39e-09!18;UBERON:0004139!7.39e-09!18;UBERON:0004291!7.39e-09!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.27e-11,18;UBERON:0000948,1.27e-11,18;UBERON:0005498,1.27e-11,18;UBERON:0004140,1.27e-11,18;UBERON:0009881,1.27e-11,18;UBERON:0004141,1.27e-11,18;UBERON:0003084,1.27e-11,18;UBERON:0007005,1.27e-11,18;UBERON:0004139,1.27e-11,18;UBERON:0004291,1.27e-11,18;UBERON:0004535,3.43e-10,23;UBERON:0001009,3.43e-10,23;UBERON:0004872,1.53e-07,33;UBERON:0003914,2.94e-07,47|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,1.28482726513177,0,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0.336093799142464,1.54355661621568,1.14613375975503,2.06268836910977,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.630974884054146,0.571301968807607,0.441737081903227,0,0.479227355091182,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.823388792421687,0,0,1.12552522006336,0.30559649555362,0,0.427115042397309,0.745597783301202,0.302904773332736,0.151143120213571,0,0.860423876981386,0,1.07940638327563,0,0,0.140444420131752,0.340860645156116,3.11743205523443,1.06001872353102,0.281686839553361,0,0,0,0.432982082022428,0,0,0.34255163915718,0,0.148442139064825,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.587943535678524,0,0,0,0,1.45590164952668,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,1.62942982160506,0.373220911830279,0,0.210441855886474,1.04096354370163,0.459804208866946,0.540186389416048,1.65775299619287,0.136072998302656,0.640568601424249,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0,0.411564272815887,0.796137067273973,0,0,0,0.621377317606506,1.87620847984877,2.34080679899319,1.18372367792605,1.57411385397923,2.62254091908543,1.62773761325285,1.07309360559848,0.934122738937356,0.987359099480883,4.43252153013557,0.810688095458557,0.584799949701329,0,0.671032093801859,0,0.308713837137853,0.330418782983798,0,0.853153002140936,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.988193728344065,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0.398282546508734,0.189667900953082,1.02823661348756,0,2.03651327845314,0.581857461502877,0.420814919341911,0.252946148497029,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,15.814502718009,1.48856379067401,0.312037673114561,0.757736633841335,0.538192240565737,0,0.369506380333209,0,0.325929952884052,1.18821560042632,0.704070744865506,0.335012514883631,0.238043640886014,0,0.788175720530955,0.8858587585951,1.91345722388985,0.983179888294428,2.59027472798843,1.01254341007058,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0,1.47541450839008,0.504941854408746,1.26203287766503,0.390438744296638,1.50796378412959,0.477937595905104,0.445597348164788,0.283076530788832,1.61924280669958,1.46127928955656,0,0,0.141940085208269,0.712262414669021,1.30309567482861,0.164970122972535,0,0.971122544619926,0.302323556964751,1.13163047853539,0,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,1.60531935841864,0.822745103010605,0,0.469343416127421,0.847328283455281,0,0,0.322928853391811,0.301564624640779,0.716234064018819,0.492422699235184,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.609958401380546,0.86404272657441,0.418176592028937,1.09181281873089,1.07891477107857,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.827292452285488,0.583353565032143,0.645799117388655,2.53434188236167,1.29092962510329,1.0416350787516,0.209718688851422,0,0,0,0.405450430580328,0.513554785824136,0.25984164595559,0,0.596044064343795,0.240390899039938,0.147689527174577,0.403865799792591,0.15241361331,0.201652370273681,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.415149390336707,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0.964546102318525,0,0.441596760403192,1.71434626192708,0.354951612318675,1.1921809497366,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0.765153328275374,0.220591419119515,0|short_description=p5@Calu}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12321 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=G3UXA8 | |||
|association_with_transcript=-35bp_to_ENSMUST00000156163_5end | |||
|cluster_id=chr6:29311410..29311425,+ | |||
|description=CAGE_peak_5_at_Calu_5end | |||
|id=chr6:29311410..29311425,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.39e-09!18;UBERON:0000948!7.39e-09!18;UBERON:0005498!7.39e-09!18;UBERON:0004140!7.39e-09!18;UBERON:0009881!7.39e-09!18;UBERON:0004141!7.39e-09!18;UBERON:0003084!7.39e-09!18;UBERON:0007005!7.39e-09!18;UBERON:0004139!7.39e-09!18;UBERON:0004291!7.39e-09!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.27e-11,18;UBERON:0000948,1.27e-11,18;UBERON:0005498,1.27e-11,18;UBERON:0004140,1.27e-11,18;UBERON:0009881,1.27e-11,18;UBERON:0004141,1.27e-11,18;UBERON:0003084,1.27e-11,18;UBERON:0007005,1.27e-11,18;UBERON:0004139,1.27e-11,18;UBERON:0004291,1.27e-11,18;UBERON:0004535,3.43e-10,23;UBERON:0001009,3.43e-10,23;UBERON:0004872,1.53e-07,33;UBERON:0003914,2.94e-07,47 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,1.28482726513177,0,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0.336093799142464,1.54355661621568,1.14613375975503,2.06268836910977,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.630974884054146,0.571301968807607,0.441737081903227,0,0.479227355091182,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.823388792421687,0,0,1.12552522006336,0.30559649555362,0,0.427115042397309,0.745597783301202,0.302904773332736,0.151143120213571,0,0.860423876981386,0,1.07940638327563,0,0,0.140444420131752,0.340860645156116,3.11743205523443,1.06001872353102,0.281686839553361,0,0,0,0.432982082022428,0,0,0.34255163915718,0,0.148442139064825,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.587943535678524,0,0,0,0,1.45590164952668,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,1.62942982160506,0.373220911830279,0,0.210441855886474,1.04096354370163,0.459804208866946,0.540186389416048,1.65775299619287,0.136072998302656,0.640568601424249,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0,0.411564272815887,0.796137067273973,0,0,0,0.621377317606506,1.87620847984877,2.34080679899319,1.18372367792605,1.57411385397923,2.62254091908543,1.62773761325285,1.07309360559848,0.934122738937356,0.987359099480883,4.43252153013557,0.810688095458557,0.584799949701329,0,0.671032093801859,0,0.308713837137853,0.330418782983798,0,0.853153002140936,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.988193728344065,0.754005626400808,0.198956472041151,0.38992817423824,0,0.648414149624083,0.398282546508734,0.189667900953082,1.02823661348756,0,2.03651327845314,0.581857461502877,0.420814919341911,0.252946148497029,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,15.814502718009,1.48856379067401,0.312037673114561,0.757736633841335,0.538192240565737,0,0.369506380333209,0,0.325929952884052,1.18821560042632,0.704070744865506,0.335012514883631,0.238043640886014,0,0.788175720530955,0.8858587585951,1.91345722388985,0.983179888294428,2.59027472798843,1.01254341007058,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0,1.47541450839008,0.504941854408746,1.26203287766503,0.390438744296638,1.50796378412959,0.477937595905104,0.445597348164788,0.283076530788832,1.61924280669958,1.46127928955656,0,0,0.141940085208269,0.712262414669021,1.30309567482861,0.164970122972535,0,0.971122544619926,0.302323556964751,1.13163047853539,0,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,1.60531935841864,0.822745103010605,0,0.469343416127421,0.847328283455281,0,0,0.322928853391811,0.301564624640779,0.716234064018819,0.492422699235184,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.609958401380546,0.86404272657441,0.418176592028937,1.09181281873089,1.07891477107857,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.827292452285488,0.583353565032143,0.645799117388655,2.53434188236167,1.29092962510329,1.0416350787516,0.209718688851422,0,0,0,0.405450430580328,0.513554785824136,0.25984164595559,0,0.596044064343795,0.240390899039938,0.147689527174577,0.403865799792591,0.15241361331,0.201652370273681,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.415149390336707,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0.964546102318525,0,0.441596760403192,1.71434626192708,0.354951612318675,1.1921809497366,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0.765153328275374,0.220591419119515,0 | |||
|short_description=p5@Calu | |||
}} |
Latest revision as of 00:49, 27 September 2015
Short description: | p5@Calu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Calu_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -35bp_to_ENSMUST00000156163_5end |
EntrezGene: | Calu |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.27e-11 | 18 |
heart | 1.27e-11 | 18 |
primitive heart tube | 1.27e-11 | 18 |
primary heart field | 1.27e-11 | 18 |
anterior lateral plate mesoderm | 1.27e-11 | 18 |
heart tube | 1.27e-11 | 18 |
heart primordium | 1.27e-11 | 18 |
cardiac mesoderm | 1.27e-11 | 18 |
cardiogenic plate | 1.27e-11 | 18 |
heart rudiment | 1.27e-11 | 18 |
cardiovascular system | 3.43e-10 | 23 |
circulatory system | 3.43e-10 | 23 |
splanchnic layer of lateral plate mesoderm | 1.53e-07 | 33 |
epithelial tube | 2.94e-07 | 47 |