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FFCP PHASE1:Mm9::chr9:66198223..66198242,+: Difference between revisions

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{{FFCP|EntrezGene=235439|HGNC=|UniProt=E9PZP8,Q99KS8|association_with_transcript=-14bp_to_ENSMUST00000144280,NM_145617,uc009qeo.1,uc009qev.2_5end|description=CAGE_peak_2_at_Herc1_5end|id=chr9:66198223..66198242,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.29e-09!63;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0002346!1.74e-08!71;UBERON:0003075!1.74e-08!71;UBERON:0007284!1.74e-08!71;UBERON:0000955!3.05e-08!50;UBERON:0006238!3.05e-08!50;UBERON:0003056!3.93e-08!49;UBERON:0002616!8.28e-08!49;UBERON:0001017!1.86e-07!73;UBERON:0005743!1.86e-07!73;UBERON:0002020!2.35e-07!34;UBERON:0004121!2.46e-07!102;UBERON:0000924!2.46e-07!102;UBERON:0006601!2.46e-07!102;UBERON:0000073!4.94e-07!75;UBERON:0001016!4.94e-07!75;UBERON:0002021!7.83e-07!10;UBERON:0000411!7.83e-07!10;UBERON:0001950!7.83e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.23e-10,64;UBERON:0003075,1.23e-10,64;UBERON:0007284,1.23e-10,64;UBERON:0010371,2.19e-10,73;UBERON:0000073,1.41e-09,54;UBERON:0004121,7.75e-09,95;UBERON:0000924,7.75e-09,95;UBERON:0006601,7.75e-09,95;UBERON:0001049,1.12e-08,52;UBERON:0005068,1.12e-08,52;UBERON:0006241,1.12e-08,52;UBERON:0007135,1.12e-08,52;UBERON:0003056,4.08e-08,49;UBERON:0010314,4.67e-08,92;UBERON:0001017,1.54e-07,73;UBERON:0002020,2.45e-07,34;UBERON:0000955,3.99e-07,47;UBERON:0006238,3.99e-07,47;UBERON:0001016,4.11e-07,75;UBERON:0002021,7.73e-07,10;UBERON:0000411,7.73e-07,10;UBERON:0001950,7.73e-07,10|phase1_expression=1.60148847104794,1.04692622291808,0.909998478779072,3.0246421130683,5.00895729946347,1.84667199103079,1.63528848416868,3.48632973292256,1.54867594366833,3.04283884218592,1.02730780935303,1.7549874978974,3.42401459862411,2.79745287740792,3.99731714178795,3.23960427823721,2.79824751251259,2.83915948822414,3.01651753932625,1.69755860719212,6.71841992193451,1.48936426801328,1.30599894569468,0.799962113967033,1.60586496747019,1.14846392823004,0.86152399231815,1.29282739611533,0.760093677825496,1.00812051903972,1.77384408524244,3.17515336729816,3.07532393792285,0,2.02196133825892,0.664938581433969,1.22501613757421,2.09265815368454,0,4.18818995179039,5.29408339227913,2.73218193983378,3.39857247121808,1.38486499773135,2.43304634926835,3.30384153891027,0,0,0,0.972149495371417,0.419959264876088,0,2.01339127269284,3.62681071005672,4.36921938885203,0.771778308107841,1.43266719969378,4.64104883049698,5.05791152148994,1.05798195854407,3.1691570175309,1.0165335962074,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0,2.59224030771194,2.43010688997043,3.15487442027073,3.42781181284564,2.87129103237098,3.91970557487853,1.91690942036473,1.83843757322004,8.8092704799511,4.21368215681119,4.14737639791857,5.01167893374737,2.28719109006024,4.16730696445408,1.67509799400829,3.93933827022176,6.57032465440283,5.30331453852602,8.96941589034349,6.71038004971082,2.65041676666144,1.36028808192214,1.73918693221007,4.30211938490693,2.03991400112325,2.15881276655127,1.94932925234301,3.13618820968135,2.52799956237153,0.511290967734173,0,0.70667914902068,2.67602497575693,2.56652954828636,2.54805239706646,0,1.29894624606728,0.760079596425296,2.02209778005913,2.05530983494308,6.21450920753212,2.3750742250372,2.4287945747259,2.13125834818499,0.922461989024234,2.11011696773672,1.88141931417128,1.88499886994513,1.97755974187499,4.77177877835708,3.5384422077995,1.94120219936891,3.5334642953663,2.90925151881133,0,6.14839673724249,7.33063473847093,2.04365644166873,2.15667224110656,0.599902730993408,1.27070227073065,4.6435098215495,3.20250421973039,6.53402630986895,4.34560800480691,7.92717917724025,3.94797284663164,4.70499662896497,2.64782346010822,2.36373244159177,1.26361379216837,3.99839526184301,2.99277018814219,1.83921683546778,3.78130472591233,3.0140963567143,4.55844544313897,4.86832137082429,4.96619140166563,3.3631438196072,2.80238390812695,3.21480336285293,2.11141348996739,1.97276159184817,2.78047249225598,2.089512999133,4.32142486456681,2.38841120182192,0.702213187313235,1.02939162845886,1.70498099637356,2.69263504296152,1.64168241986767,1.2604344302271,1.89395788468168,3.14822770795846,2.46827380619805,2.55787339225449,3.21928081679543,2.6856028744449,2.63295759861569,3.447516745661,4.2155780963845,4.09359964790931,3.95190207523891,2.68412837520744,3.99550902271842,3.2929475961371,1.98251269790279,3.70230793328962,1.91959425481711,2.55460339046482,2.19074684247559,1.81515172161008,1.77902435075896,1.71203063501303,0.949058123089023,1.81168850196412,1.00534083520108,2.98434708061726,1.36474860983384,1.79763881730844,0.864552199498777,1.99141273254367,0.569003702859245,1.82797620175566,4.50830942692322,2.24016460629846,1.35766741017338,2.59502533594179,2.97211724484009,2.80459281161244,2.04098346193787,2.34454611451421,0.889357881261447,2.16898637430922,3.73462090715086,2.69834534861824,3.85434230638156,2.894125917029,2.80088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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235439
|HGNC=
|TSSclassifier=NA
|UniProt=E9PZP8,Q99KS8
|association_with_transcript=-14bp_to_ENSMUST00000144280,NM_145617,uc009qeo.1,uc009qev.2_5end
|cluster_id=chr9:66198223..66198242,+
|description=CAGE_peak_2_at_Herc1_5end
|id=chr9:66198223..66198242,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.29e-09!63;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0002346!1.74e-08!71;UBERON:0003075!1.74e-08!71;UBERON:0007284!1.74e-08!71;UBERON:0000955!3.05e-08!50;UBERON:0006238!3.05e-08!50;UBERON:0003056!3.93e-08!49;UBERON:0002616!8.28e-08!49;UBERON:0001017!1.86e-07!73;UBERON:0005743!1.86e-07!73;UBERON:0002020!2.35e-07!34;UBERON:0004121!2.46e-07!102;UBERON:0000924!2.46e-07!102;UBERON:0006601!2.46e-07!102;UBERON:0000073!4.94e-07!75;UBERON:0001016!4.94e-07!75;UBERON:0002021!7.83e-07!10;UBERON:0000411!7.83e-07!10;UBERON:0001950!7.83e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.23e-10,64;UBERON:0003075,1.23e-10,64;UBERON:0007284,1.23e-10,64;UBERON:0010371,2.19e-10,73;UBERON:0000073,1.41e-09,54;UBERON:0004121,7.75e-09,95;UBERON:0000924,7.75e-09,95;UBERON:0006601,7.75e-09,95;UBERON:0001049,1.12e-08,52;UBERON:0005068,1.12e-08,52;UBERON:0006241,1.12e-08,52;UBERON:0007135,1.12e-08,52;UBERON:0003056,4.08e-08,49;UBERON:0010314,4.67e-08,92;UBERON:0001017,1.54e-07,73;UBERON:0002020,2.45e-07,34;UBERON:0000955,3.99e-07,47;UBERON:0006238,3.99e-07,47;UBERON:0001016,4.11e-07,75;UBERON:0002021,7.73e-07,10;UBERON:0000411,7.73e-07,10;UBERON:0001950,7.73e-07,10
|phase1_expression=1.60148847104794,1.04692622291808,0.909998478779072,3.0246421130683,5.00895729946347,1.84667199103079,1.63528848416868,3.48632973292256,1.54867594366833,3.04283884218592,1.02730780935303,1.7549874978974,3.42401459862411,2.79745287740792,3.99731714178795,3.23960427823721,2.79824751251259,2.83915948822414,3.01651753932625,1.69755860719212,6.71841992193451,1.48936426801328,1.30599894569468,0.799962113967033,1.60586496747019,1.14846392823004,0.86152399231815,1.29282739611533,0.760093677825496,1.00812051903972,1.77384408524244,3.17515336729816,3.07532393792285,0,2.02196133825892,0.664938581433969,1.22501613757421,2.09265815368454,0,4.18818995179039,5.29408339227913,2.73218193983378,3.39857247121808,1.38486499773135,2.43304634926835,3.30384153891027,0,0,0,0.972149495371417,0.419959264876088,0,2.01339127269284,3.62681071005672,4.36921938885203,0.771778308107841,1.43266719969378,4.64104883049698,5.05791152148994,1.05798195854407,3.1691570175309,1.0165335962074,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0,2.59224030771194,2.43010688997043,3.15487442027073,3.42781181284564,2.87129103237098,3.91970557487853,1.91690942036473,1.83843757322004,8.8092704799511,4.21368215681119,4.14737639791857,5.01167893374737,2.28719109006024,4.16730696445408,1.67509799400829,3.93933827022176,6.57032465440283,5.30331453852602,8.96941589034349,6.71038004971082,2.65041676666144,1.36028808192214,1.73918693221007,4.30211938490693,2.03991400112325,2.15881276655127,1.94932925234301,3.13618820968135,2.52799956237153,0.511290967734173,0,0.70667914902068,2.67602497575693,2.56652954828636,2.54805239706646,0,1.29894624606728,0.760079596425296,2.02209778005913,2.05530983494308,6.21450920753212,2.3750742250372,2.4287945747259,2.13125834818499,0.922461989024234,2.11011696773672,1.88141931417128,1.88499886994513,1.97755974187499,4.77177877835708,3.5384422077995,1.94120219936891,3.5334642953663,2.90925151881133,0,6.14839673724249,7.33063473847093,2.04365644166873,2.15667224110656,0.599902730993408,1.27070227073065,4.6435098215495,3.20250421973039,6.53402630986895,4.34560800480691,7.92717917724025,3.94797284663164,4.70499662896497,2.64782346010822,2.36373244159177,1.26361379216837,3.99839526184301,2.99277018814219,1.83921683546778,3.78130472591233,3.0140963567143,4.55844544313897,4.86832137082429,4.96619140166563,3.3631438196072,2.80238390812695,3.21480336285293,2.11141348996739,1.97276159184817,2.78047249225598,2.089512999133,4.32142486456681,2.38841120182192,0.702213187313235,1.02939162845886,1.70498099637356,2.69263504296152,1.64168241986767,1.2604344302271,1.89395788468168,3.14822770795846,2.46827380619805,2.55787339225449,3.21928081679543,2.6856028744449,2.63295759861569,3.447516745661,4.2155780963845,4.09359964790931,3.95190207523891,2.68412837520744,3.99550902271842,3.2929475961371,1.98251269790279,3.70230793328962,1.91959425481711,2.55460339046482,2.19074684247559,1.81515172161008,1.77902435075896,1.71203063501303,0.949058123089023,1.81168850196412,1.00534083520108,2.98434708061726,1.36474860983384,1.79763881730844,0.864552199498777,1.99141273254367,0.569003702859245,1.82797620175566,4.50830942692322,2.24016460629846,1.35766741017338,2.59502533594179,2.97211724484009,2.80459281161244,2.04098346193787,2.34454611451421,0.889357881261447,2.16898637430922,3.73462090715086,2.69834534861824,3.85434230638156,2.894125917029,2.80088436959562,1.72617682470486,2.2698931748505,3.0201755450689,2.87536413054709,1.86070473834252,2.18426371180192,2.52578877947112,2.69096120282868,2.41221760681684,3.32555742299888,2.08440552947533,1.30371981153621,3.73439188705414,1.87752198630802,5.19269398069629,2.38043640886014,2.14647012643579,2.20689201748667,2.43611158613652,3.6674596791222,2.94953966488328,2.59027472798843,2.89298117163023,0,2.71952841909355,0.983528546038072,3.31124095565679,4.17431533968259,4.33683240391152,1.14754461763673,4.29200576247434,4.41711507182759,2.73307121007647,2.15423397732799,3.58453196928828,2.45078541490634,2.26461224631066,2.42886421004937,2.33804686329049,3.95287777946523,5.14114106274891,2.98074178937364,2.31485284767432,3.09485222771795,2.47455184458803,0,1.69946445308487,2.11626489875326,0.754420319023592,0.885905678642318,1.53717573971964,1.80899805217755,2.18120237686503,2.85197902707777,3.16036757935816,0,2.06271086496374,4.76615448055303,2.88097750450096,1.94038025674132,1.92903331528433,2.48276327099183,3.56737635204141,2.30368628842969,3.04464949114599,2.58138878870081,2.75381692122966,1.54369878638473,2.30840754118072,3.22928853391811,4.28221766989907,3.70054266409723,3.11867709515616,1.45740418314925,4.07935664423121,3.58828849675491,2.88941615148511,1.48155621895769,3.39063222608444,3.69074414846768,5.26189798375002,1.86976272993241,2.93898049879682,2.3493995546752,0,4.74503990371703,3.25311147402958,2.26811215725783,1.88179466413022,1.74690050996942,1.48350781023303,3.2234847732881,3.40282724579238,1.55537967950151,0,15.7834022831573,3.88743019714345,3.47462829959905,3.11121901350476,3.09983576346555,2.02747350588934,2.8165737274981,4.03633593016245,5.87212328783981,9.18019659138823,16.7057403629562,1.89606672376907,2.63542779877213,3.3894615864393,2.20865399062252,2.32734704367726,2.18549490259391,2.40390899039938,1.18151621739662,1.81739609906666,2.057583779685,1.91569751759997,1.65678397257579,1.82802499116626,1.5193997283604,4.53460767230423,1.55390167361845,1.61484941897056,2.3503846290971,2.51146472241848,0.750729901804728,2.74727436400898,1.92931541171159,2.50786052017682,3.3885110557024,6.44455331110048,6.30185064783336,6.35856774671644,8.22099023724771,6.0431511791176,9.45031500324528,6.30449684513909,7.70342095273148,4.14208249401456,1.45302286617847,3.19219898720825,3.07320490357441,2.67417388775123,2.72497111416377,2.02227859295016,2.66696073361938,2.67845574410562,2.24643446714271,3.28506375292937,3.8021894983536,2.45214243801899,2.90288673156635,3.13723246783859,2.98664438569189,2.38146845641537,4.05595140806994,2.89363830695558,2.47251540481984,2.79677948255355,1.02860775715625,2.12970967391205,3.57654284920981,1.45346416632329,2.35273451038327,4.23073039458383,3.29270351170991,2.63069711437843,3.12349461845482,1.12228454331548,3.79632057997357,3.25064791839359,3.27384834535751,3.56354734727722,4.05103883060397,2.99772693525535,3.97683734357194,2.79332370262788,1.72159498861959,2.20591419119516,3.70988536992674
|short_description=p2@Herc1
}}

Latest revision as of 00:47, 27 September 2015

Short description:p2@Herc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Herc1_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000144280, NM_145617, uc009qeo.1, uc009qev.2_5end
EntrezGene:Herc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Herc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G14.22
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D52.97
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G35.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D95.87
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.23e-1064
neural plate1.23e-1064
presumptive neural plate1.23e-1064
ecto-epithelium2.19e-1073
regional part of nervous system1.41e-0954
ectoderm-derived structure7.75e-0995
ectoderm7.75e-0995
presumptive ectoderm7.75e-0995
neural tube1.12e-0852
neural rod1.12e-0852
future spinal cord1.12e-0852
neural keel1.12e-0852
pre-chordal neural plate4.08e-0849
structure with developmental contribution from neural crest4.67e-0892
central nervous system1.54e-0773
gray matter2.45e-0734
brain3.99e-0747
future brain3.99e-0747
nervous system4.11e-0775
occipital lobe7.73e-0710
visual cortex7.73e-0710
neocortex7.73e-0710
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