FFCP PHASE1:Mm9::chr15:76181076..76181087,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=106025|HGNC=|UniProt=|association_with_transcript=24bp_to_ENSMUST00000137106_5end|description=CAGE_peak_4_at_Sharpin_5end|id=chr15:76181076..76181087,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,8.26e-07,23;CL:0000337,8.26e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.85e-09!73;UBERON:0005743!4.85e-09!73;UBERON:0000073!7.14e-09!75;UBERON:0001016!7.14e-09!75;UBERON:0001049!7.93e-09!52;UBERON:0005068!7.93e-09!52;UBERON:0006241!7.93e-09!52;UBERON:0007135!7.93e-09!52;UBERON:0000955!1.61e-07!50;UBERON:0006238!1.61e-07!50;UBERON:0002616!2.66e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-13,54;UBERON:0001017,8.20e-13,73;UBERON:0001049,1.62e-12,52;UBERON:0005068,1.62e-12,52;UBERON:0006241,1.62e-12,52;UBERON:0007135,1.62e-12,52;UBERON:0001016,2.66e-12,75;UBERON:0003076,7.40e-11,12;UBERON:0003057,7.40e-11,12;UBERON:0002346,2.81e-10,64;UBERON:0003075,2.81e-10,64;UBERON:0007284,2.81e-10,64;UBERON:0004121,2.85e-09,95;UBERON:0000924,2.85e-09,95;UBERON:0006601,2.85e-09,95;UBERON:0002616,8.38e-09,46;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0010371,2.29e-08,73;UBERON:0002020,2.48e-07,34;UBERON:0010314,4.10e-07,92|phase1_expression=0,0,0,0,1.00179145989269,0.839396359559449,0.233612640595526,0.258246646883153,1.267098499365,3.04283884218592,0.171217968225505,0.8774937489487,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.315462165358238,0,0,0.17008658030214,0.496454756004426,0.522399578277871,0,0,0,0.430761996159075,0.430942465371778,0.950117097281869,0,0.665191531965914,0.635030673459631,0,0,0,0.332469290716985,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,1.1330713617802,0.405507724878058,0.367093504323363,2.34717403304412,0.218025156380447,0.219686182734472,0.58328969722285,0.699932108126813,0,0.503347818173209,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0.7104801149461,1.19840044207362,1.53687322128622,0,0.405017814995072,0.210324961351382,0.856952953211411,1.76694832761291,0.122490799214954,0.575072826109418,0,1.10115880999389,1.14918604276669,0.614426133024974,0.659431438650969,1.18933936683133,1.04182674111352,1.67509799400829,1.12552522006336,0.763991238884051,1.17851434189467,0.854230084794618,1.3047961207771,0.37863096666592,0.302286240427142,0.579728977403356,0,0,0,1.29955283489534,0,0.280888840263504,0.511290967734173,0.259786004602869,1.06001872353102,0.281686839553361,0,2.54805239706646,0,0.216491041011214,0,0,0,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,0,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,0.441683036920787,0,1.86391761218122,1.17112318804619,0,0.510914110417183,0.11981512450592,0,0.254140454146129,1.04853447583376,1.83000241127451,1.13088916901578,1.04294592115366,1.53429274398198,1.0389402227978,1.1356888414743,0.712875546952214,0,0.505445516867349,0.420883711772948,0.910843100738926,0,1.0803727788321,0.30140963567143,0.272145996605311,0.2562274405697,0,0.258703370739016,0.646703978798527,1.70195472151037,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0,0.199034266818493,0.702213187313235,0,0,0.414251545071004,0.703578179943289,0,0,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,1.64167464079095,0.648550476366846,1.02339991197733,0.878200461164203,0.939444931322602,0.841159794256509,0.411618449517138,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.58489226135736,0,0.432276099749388,0.398282546508734,0.569003702859245,0.456994050438915,0,0,0.581857461502877,0.280543279561274,0.442655759869801,0,0.784993639206874,0.370191491765402,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.717589654087649,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.670025029767263,0.476087281772027,0,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,2.72936002979246,1.64096361229084,0.491804836130026,1.26235463602186,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,0,0.614870295887855,0.516856586336442,0,0,0,2.10837217149998,0,0.680879211507576,0.900305470156551,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.704015124191131,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,2.03967832211561,0,0.412773735926445,0,0,0.27338845544205,0.457556346413045,0.339956859987711,0.279902904647316,0.552799895217695,0,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0.87345025498471,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.675824501963113,0.234714477291508,0.5208175393758,0.838874755405687,0,0.576060012515731,1.26404448251271,0.202725215290164,0.924398614483445,0.389762468933385,0.358053391334963,0.79472541912506,0.600977247599844,0,0,0.381034033274999,0.201652370273681,0.487289403698762,0,0.233753804363138,0.680191150845634,1.10992976687032,0.448569283047378,0.335769232728157,0,0.375364950902364,0.549454872801795,0,0,0.564751842617067,0,1.14579102687879,1.20297227640581,0,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.103787347584177,0,0.512200817262403,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0,0.565879024158229,0.561849044819294,0.256100609619477,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0,0,0,0.354951612318675,0,0.145346416632329,0.564656282491984,0.25384382367503,0,0.263069711437843,0.679020569229309,0,0.355905054372522,0.689531376628944,0,0.464810523557898,0.385813221962283,0.499621155875892,0.233931608445408,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264|short_description=p4@Sharpin}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106025 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENSMUST00000137106_5end | |||
|cluster_id=chr15:76181076..76181087,- | |||
|description=CAGE_peak_4_at_Sharpin_5end | |||
|id=chr15:76181076..76181087,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.26e-07,23;CL:0000337,8.26e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.85e-09!73;UBERON:0005743!4.85e-09!73;UBERON:0000073!7.14e-09!75;UBERON:0001016!7.14e-09!75;UBERON:0001049!7.93e-09!52;UBERON:0005068!7.93e-09!52;UBERON:0006241!7.93e-09!52;UBERON:0007135!7.93e-09!52;UBERON:0000955!1.61e-07!50;UBERON:0006238!1.61e-07!50;UBERON:0002616!2.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-13,54;UBERON:0001017,8.20e-13,73;UBERON:0001049,1.62e-12,52;UBERON:0005068,1.62e-12,52;UBERON:0006241,1.62e-12,52;UBERON:0007135,1.62e-12,52;UBERON:0001016,2.66e-12,75;UBERON:0003076,7.40e-11,12;UBERON:0003057,7.40e-11,12;UBERON:0002346,2.81e-10,64;UBERON:0003075,2.81e-10,64;UBERON:0007284,2.81e-10,64;UBERON:0004121,2.85e-09,95;UBERON:0000924,2.85e-09,95;UBERON:0006601,2.85e-09,95;UBERON:0002616,8.38e-09,46;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0010371,2.29e-08,73;UBERON:0002020,2.48e-07,34;UBERON:0010314,4.10e-07,92 | |||
|phase1_expression=0,0,0,0,1.00179145989269,0.839396359559449,0.233612640595526,0.258246646883153,1.267098499365,3.04283884218592,0.171217968225505,0.8774937489487,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.315462165358238,0,0,0.17008658030214,0.496454756004426,0.522399578277871,0,0,0,0.430761996159075,0.430942465371778,0.950117097281869,0,0.665191531965914,0.635030673459631,0,0,0,0.332469290716985,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,1.1330713617802,0.405507724878058,0.367093504323363,2.34717403304412,0.218025156380447,0.219686182734472,0.58328969722285,0.699932108126813,0,0.503347818173209,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0.7104801149461,1.19840044207362,1.53687322128622,0,0.405017814995072,0.210324961351382,0.856952953211411,1.76694832761291,0.122490799214954,0.575072826109418,0,1.10115880999389,1.14918604276669,0.614426133024974,0.659431438650969,1.18933936683133,1.04182674111352,1.67509799400829,1.12552522006336,0.763991238884051,1.17851434189467,0.854230084794618,1.3047961207771,0.37863096666592,0.302286240427142,0.579728977403356,0,0,0,1.29955283489534,0,0.280888840263504,0.511290967734173,0.259786004602869,1.06001872353102,0.281686839553361,0,2.54805239706646,0,0.216491041011214,0,0,0,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,0,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,0.441683036920787,0,1.86391761218122,1.17112318804619,0,0.510914110417183,0.11981512450592,0,0.254140454146129,1.04853447583376,1.83000241127451,1.13088916901578,1.04294592115366,1.53429274398198,1.0389402227978,1.1356888414743,0.712875546952214,0,0.505445516867349,0.420883711772948,0.910843100738926,0,1.0803727788321,0.30140963567143,0.272145996605311,0.2562274405697,0,0.258703370739016,0.646703978798527,1.70195472151037,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0,0.199034266818493,0.702213187313235,0,0,0.414251545071004,0.703578179943289,0,0,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,1.64167464079095,0.648550476366846,1.02339991197733,0.878200461164203,0.939444931322602,0.841159794256509,0.411618449517138,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.58489226135736,0,0.432276099749388,0.398282546508734,0.569003702859245,0.456994050438915,0,0,0.581857461502877,0.280543279561274,0.442655759869801,0,0.784993639206874,0.370191491765402,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.717589654087649,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.670025029767263,0.476087281772027,0,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,2.72936002979246,1.64096361229084,0.491804836130026,1.26235463602186,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,0,0.614870295887855,0.516856586336442,0,0,0,2.10837217149998,0,0.680879211507576,0.900305470156551,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.704015124191131,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,2.03967832211561,0,0.412773735926445,0,0,0.27338845544205,0.457556346413045,0.339956859987711,0.279902904647316,0.552799895217695,0,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0.87345025498471,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.675824501963113,0.234714477291508,0.5208175393758,0.838874755405687,0,0.576060012515731,1.26404448251271,0.202725215290164,0.924398614483445,0.389762468933385,0.358053391334963,0.79472541912506,0.600977247599844,0,0,0.381034033274999,0.201652370273681,0.487289403698762,0,0.233753804363138,0.680191150845634,1.10992976687032,0.448569283047378,0.335769232728157,0,0.375364950902364,0.549454872801795,0,0,0.564751842617067,0,1.14579102687879,1.20297227640581,0,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.103787347584177,0,0.512200817262403,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0,0.565879024158229,0.561849044819294,0.256100609619477,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0,0,0,0.354951612318675,0,0.145346416632329,0.564656282491984,0.25384382367503,0,0.263069711437843,0.679020569229309,0,0.355905054372522,0.689531376628944,0,0.464810523557898,0.385813221962283,0.499621155875892,0.233931608445408,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Sharpin | |||
}} |
Latest revision as of 00:40, 27 September 2015
Short description: | p4@Sharpin |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sharpin_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENSMUST00000137106_5end |
EntrezGene: | Sharpin |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.26e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.26e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.08e-13 | 54 |
central nervous system | 8.20e-13 | 73 |
neural tube | 1.62e-12 | 52 |
neural rod | 1.62e-12 | 52 |
future spinal cord | 1.62e-12 | 52 |
neural keel | 1.62e-12 | 52 |
nervous system | 2.66e-12 | 75 |
posterior neural tube | 7.40e-11 | 12 |
chordal neural plate | 7.40e-11 | 12 |
neurectoderm | 2.81e-10 | 64 |
neural plate | 2.81e-10 | 64 |
presumptive neural plate | 2.81e-10 | 64 |
ectoderm-derived structure | 2.85e-09 | 95 |
ectoderm | 2.85e-09 | 95 |
presumptive ectoderm | 2.85e-09 | 95 |
regional part of brain | 8.38e-09 | 46 |
basal ganglion | 1.28e-08 | 8 |
nuclear complex of neuraxis | 1.28e-08 | 8 |
aggregate regional part of brain | 1.28e-08 | 8 |
collection of basal ganglia | 1.28e-08 | 8 |
cerebral subcortex | 1.28e-08 | 8 |
brain | 1.56e-08 | 47 |
future brain | 1.56e-08 | 47 |
ecto-epithelium | 2.29e-08 | 73 |
gray matter | 2.48e-07 | 34 |
structure with developmental contribution from neural crest | 4.10e-07 | 92 |