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FFCP PHASE1:Mm9::chr9:65756586..65756605,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56404
|EntrezGene=56404
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=D3Z3P3,Q9QXN3
|UniProt=D3Z3P3,Q9QXN3
|association_with_transcript=0bp_to_ENSMUST00000126517,ENSMUST00000134338,ENSMUST00000139346,ENSMUST00000143864,NM_019797,uc009qec.2,uc009qed.2,uc012gvn.1_5end
|association_with_transcript=0bp_to_ENSMUST00000126517,ENSMUST00000134338,ENSMUST00000139346,ENSMUST00000143864,NM_019797,uc009qec.2,uc009qed.2,uc012gvn.1_5end
|cluster_id=chr9:65756586..65756605,-
|description=CAGE_peak_2_at_Trip4_5end
|description=CAGE_peak_2_at_Trip4_5end
|id=chr9:65756586..65756605,-
|id=chr9:65756586..65756605,-
|ontology_enrichment_celltype=CL:0000221!1.42e-08!44;CL:0000133!1.42e-08!44;CL:0002319!4.11e-08!43;CL:0000055!1.09e-07!50;CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23
|ontology_enrichment_celltype=CL:0000221!1.42e-08!44;CL:0000133!1.42e-08!44;CL:0002319!4.11e-08!43;CL:0000055!1.09e-07!50;CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.91e-08,23;CL:0000337,2.91e-08,23;CL:0000221,3.96e-07,44;CL:0000133,3.96e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.02e-17!75;UBERON:0001016!5.02e-17!75;UBERON:0001017!1.11e-16!73;UBERON:0005743!1.11e-16!73;UBERON:0004121!1.59e-16!102;UBERON:0000924!1.59e-16!102;UBERON:0006601!1.59e-16!102;UBERON:0000033!7.35e-16!63;UBERON:0002346!1.82e-14!71;UBERON:0003075!1.82e-14!71;UBERON:0007284!1.82e-14!71;UBERON:0000955!8.13e-14!50;UBERON:0006238!8.13e-14!50;UBERON:0002616!2.43e-13!49;UBERON:0001049!4.98e-13!52;UBERON:0005068!4.98e-13!52;UBERON:0006241!4.98e-13!52;UBERON:0007135!4.98e-13!52;UBERON:0000153!5.24e-13!94;UBERON:0007811!3.06e-12!86;UBERON:0003056!4.28e-12!49;UBERON:0003080!2.64e-10!40;UBERON:0002780!6.05e-10!39;UBERON:0001890!6.05e-10!39;UBERON:0006240!6.05e-10!39;UBERON:0002020!1.50e-08!34;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29
|ontology_enrichment_uberon=UBERON:0000073!5.02e-17!75;UBERON:0001016!5.02e-17!75;UBERON:0001017!1.11e-16!73;UBERON:0005743!1.11e-16!73;UBERON:0004121!1.59e-16!102;UBERON:0000924!1.59e-16!102;UBERON:0006601!1.59e-16!102;UBERON:0000033!7.35e-16!63;UBERON:0002346!1.82e-14!71;UBERON:0003075!1.82e-14!71;UBERON:0007284!1.82e-14!71;UBERON:0000955!8.13e-14!50;UBERON:0006238!8.13e-14!50;UBERON:0002616!2.43e-13!49;UBERON:0001049!4.98e-13!52;UBERON:0005068!4.98e-13!52;UBERON:0006241!4.98e-13!52;UBERON:0007135!4.98e-13!52;UBERON:0000153!5.24e-13!94;UBERON:0007811!3.06e-12!86;UBERON:0003056!4.28e-12!49;UBERON:0003080!2.64e-10!40;UBERON:0002780!6.05e-10!39;UBERON:0001890!6.05e-10!39;UBERON:0006240!6.05e-10!39;UBERON:0002020!1.50e-08!34;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-18,54;UBERON:0001017,5.26e-18,73;UBERON:0001016,3.75e-17,75;UBERON:0000955,6.73e-17,47;UBERON:0006238,6.73e-17,47;UBERON:0002616,3.94e-16,46;UBERON:0001049,2.07e-15,52;UBERON:0005068,2.07e-15,52;UBERON:0006241,2.07e-15,52;UBERON:0007135,2.07e-15,52;UBERON:0004121,7.23e-15,95;UBERON:0000924,7.23e-15,95;UBERON:0006601,7.23e-15,95;UBERON:0002346,3.32e-14,64;UBERON:0003075,3.32e-14,64;UBERON:0007284,3.32e-14,64;UBERON:0003080,4.89e-13,40;UBERON:0003056,6.03e-13,49;UBERON:0002780,1.90e-12,39;UBERON:0001890,1.90e-12,39;UBERON:0006240,1.90e-12,39;UBERON:0010371,4.88e-12,73;UBERON:0003528,3.83e-10,29;UBERON:0002791,3.83e-10,29;UBERON:0001893,3.83e-10,29;UBERON:0002020,6.45e-10,34;UBERON:0010314,1.46e-08,92;UBERON:0002420,6.00e-07,8;UBERON:0007245,6.00e-07,8;UBERON:0010009,6.00e-07,8;UBERON:0010011,6.00e-07,8;UBERON:0000454,6.00e-07,8
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|phase1_expression=0.480446541314382,0.348975407639361,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.387369970324729,0,0,0,0.319088635981346,0.513602189793617,0.437102012094987,0,0,0,0.315462165358238,0.274228867211478,0,4.67738095830884,0.695036658406197,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,1.0470474879476,1.17646297606203,0,2.42755176515577,0.503587271902309,1.01376931219515,0.183546752161682,0,1.96222640742402,0.878744730937887,1.74986909166855,0.979904951377538,1.43752564364972,0,0.725362142011344,0.336093799142464,0.257259436035947,0.573066879877513,1.54701627683233,0.809265843438391,1.5869729378161,1.90149421051854,0,0.889294796111139,0,0,0,1.49800055259202,2.68952813725088,1.03689612308478,0.405017814995072,0.630974884054146,1.14260393761521,0.662605622854841,0.979926393719632,2.30029130443767,0,2.20231761998777,2.29837208553338,2.61131106535614,1.71452174049252,2.56165402086747,1.56274011167028,3.62937898701795,3.93933827022176,2.75036845998258,0.883885756421003,2.70506193518296,0.931997229126503,0.832988126665025,0.906858721281426,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,0.280888840263504,0.681721290312231,0.779358013808606,0,2.11265129665021,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.79928715803342,1.03575153458869,1.33597925158342,0.520455980298408,0,0.691846491768175,0.753613202763113,0.823120949949934,0.879666139307728,0.247194967734374,0.289198713839823,0,0.808834249737046,0.441683036920787,0.969750506270444,0,1.75668478206928,1.04723353406728,0,0.239630249011841,0,0,1.3481157546434,0,1.38219787324151,1.21677024134594,2.04572365864264,1.66230435647648,1.78465389374533,0.611036183101898,0.746441823660558,0.505445516867349,1.26265113531884,0.520481771850815,0.919608417733892,0.720248519221397,0.90422890701429,1.15662048557257,0.896796041993948,2.06143794031403,1.29351685369508,0.646703978798527,0.756424320671277,1.40760899331159,0.43839146485515,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0,0,0,0.590292695242212,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0,0.439100230582101,0.134206418760372,1.68231958851302,1.54356918568927,0,0.264450566663544,0.213288250535234,1.16118335930219,0.257734922644187,0.403367049246685,0.889512175379481,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.648414149624083,1.59313018603494,0,0.456994050438915,2.25415471346161,1.4255592949172,0.775809948670503,0.561086559122548,0.885311519739602,1.03327103585722,0.627994911365499,0.740382983530803,0.296452627087149,0,0,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0.324270453550071,0,0,0,0,0,0.358794827043824,0,0,0.37898282354097,0.488894929326078,0.509235257325564,0.938760993154008,1.00503754465089,1.19021820443007,0.195133647857799,0.472905432318573,0.44292937929755,0.956728611944923,0.655453258862952,1.20879487306127,0.867894351489069,0,1.08781136763742,0.491764273019036,0.275936746304732,1.76605648986571,1.75817529888305,0,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.955875191810208,0.891194696329576,0.283076530788832,0,1.46127928955656,0.395287777946524,1.60660658210904,1.13552068166615,0.534196811001766,0.162886959353576,1.31976098378028,0,0.728341908464944,0.604647113929502,0.943025398779491,0.885905678642318,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,3.40439605753788,0.540183282093931,0.646793418913773,0.643011105094777,1.77340233642274,1.42695054081656,0.822745103010605,1.522324745573,0.704015124191131,0.63549621259146,0.441056796109924,0,0.484393280087717,0.603129249281559,0.238744688006273,0.164140899745061,1.1659233465194,0.927126510052548,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.276399947608848,0,0.632671987162271,0.406638934253697,0.756037385752609,0.418176592028937,1.31017538247707,0.539457385539283,0.826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,8.45539408026285,0.598066184175915,1.48912641411388,0.194451188344048,0.129159823477731,0.844780627453891,0.234714477291508,0.911430693907651,0.734015410979976,5.79801889982414,7.77681016896237,0.948033361884535,0.405450430580328,0.308132871494482,0.649604114888975,0.179026695667481,0.596044064343795,0.480781798079875,0.590758108698309,1.41353029927407,0.609654453239999,0.302478555410522,0.877120926657772,0.769694733122636,1.40252282617883,0.680191150845634,0.221985953374065,0.807424709485281,0.671538465456314,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0,3.95326289831947,1.84130094602871,2.29158205375759,2.23409137046794,0.685082519770642,3.0215755895588,0.675022500231806,0.900642406448441,0,2.5888015587591,0,0.399024873401031,1.19513524027894,0.729320151204882,0.419226325255965,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,1.01078884705519,0.760437899670719,0.188626341386076,0.749132059759059,0.704276676453562,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,0.412085900803307,0.588795680537589,1.37147700954166,0.532427418478012,0.476872379894642,1.16277133305863,0.752875043322645,1.01537529470012,0.548783918618318,0.263069711437843,0.543216455383447,2.80571135828869,0.355905054372522,0.0985044823755635,0.818462086339379,1.23949472948773,0.964533054905707,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0,0.463735671240843
|short_description=p2@Trip4
|short_description=p2@Trip4
}}
}}

Latest revision as of 00:37, 27 September 2015

Short description:p2@Trip4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trip4_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000126517, ENSMUST00000134338, ENSMUST00000139346, ENSMUST00000143864, NM_019797, uc009qec.2, uc009qed.2, uc012gvn.1_5end
EntrezGene:Trip4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trip4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.91e-0823
neuroblast (sensu Vertebrata)2.91e-0823
ectodermal cell3.96e-0744
neurectodermal cell3.96e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.27e-1854
central nervous system5.26e-1873
nervous system3.75e-1775
brain6.73e-1747
future brain6.73e-1747
regional part of brain3.94e-1646
neural tube2.07e-1552
neural rod2.07e-1552
future spinal cord2.07e-1552
neural keel2.07e-1552
ectoderm-derived structure7.23e-1595
ectoderm7.23e-1595
presumptive ectoderm7.23e-1595
neurectoderm3.32e-1464
neural plate3.32e-1464
presumptive neural plate3.32e-1464
anterior neural tube4.89e-1340
pre-chordal neural plate6.03e-1349
regional part of forebrain1.90e-1239
forebrain1.90e-1239
future forebrain1.90e-1239
ecto-epithelium4.88e-1273
brain grey matter3.83e-1029
regional part of telencephalon3.83e-1029
telencephalon3.83e-1029
gray matter6.45e-1034
structure with developmental contribution from neural crest1.46e-0892
basal ganglion6.00e-078
nuclear complex of neuraxis6.00e-078
aggregate regional part of brain6.00e-078
collection of basal ganglia6.00e-078
cerebral subcortex6.00e-078
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