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FFCP PHASE1:Mm9::chr4:43591523..43591539,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230101
|EntrezGene=230101
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B1AWI3
|UniProt=B1AWI3
|association_with_transcript=-15bp_to_ENSMUST00000130443_5end
|association_with_transcript=-15bp_to_ENSMUST00000130443_5end
|cluster_id=chr4:43591523..43591539,-
|description=CAGE_peak_4_at_Gba2_5end
|description=CAGE_peak_4_at_Gba2_5end
|id=chr4:43591523..43591539,-
|id=chr4:43591523..43591539,-
|ontology_enrichment_celltype=CL:0000117!1.08e-08!23;CL:0000337!1.08e-08!23
|ontology_enrichment_celltype=CL:0000117!1.08e-08!23;CL:0000337!1.08e-08!23
|ontology_enrichment_celltype_v019_2=CL:0002614,3.76e-07,3;CL:0002610,4.59e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.56e-20!52;UBERON:0005068!7.56e-20!52;UBERON:0006241!7.56e-20!52;UBERON:0007135!7.56e-20!52;UBERON:0000955!1.31e-19!50;UBERON:0006238!1.31e-19!50;UBERON:0002616!5.80e-19!49;UBERON:0000073!3.58e-17!75;UBERON:0001016!3.58e-17!75;UBERON:0001017!3.69e-17!73;UBERON:0005743!3.69e-17!73;UBERON:0003080!2.30e-15!40;UBERON:0002020!3.10e-15!34;UBERON:0000033!9.91e-15!63;UBERON:0002780!9.98e-15!39;UBERON:0001890!9.98e-15!39;UBERON:0006240!9.98e-15!39;UBERON:0002346!6.69e-14!71;UBERON:0003075!6.69e-14!71;UBERON:0007284!6.69e-14!71;UBERON:0004121!1.98e-13!102;UBERON:0000924!1.98e-13!102;UBERON:0006601!1.98e-13!102;UBERON:0002791!2.81e-13!29;UBERON:0003528!2.81e-13!29;UBERON:0001893!2.81e-13!29;UBERON:0007811!2.16e-12!86;UBERON:0003056!5.00e-12!49;UBERON:0000153!9.74e-11!94;UBERON:0000956!7.29e-10!21;UBERON:0001869!7.29e-10!21;UBERON:0000203!7.29e-10!21;UBERON:0000025!8.34e-09!114;UBERON:0002619!9.26e-09!17;UBERON:0002021!2.82e-08!10;UBERON:0000411!2.82e-08!10;UBERON:0001950!2.82e-08!10;UBERON:0004111!6.30e-08!122;UBERON:0000477!7.17e-08!154;UBERON:0000475!4.66e-07!200
|ontology_enrichment_uberon=UBERON:0001049!7.56e-20!52;UBERON:0005068!7.56e-20!52;UBERON:0006241!7.56e-20!52;UBERON:0007135!7.56e-20!52;UBERON:0000955!1.31e-19!50;UBERON:0006238!1.31e-19!50;UBERON:0002616!5.80e-19!49;UBERON:0000073!3.58e-17!75;UBERON:0001016!3.58e-17!75;UBERON:0001017!3.69e-17!73;UBERON:0005743!3.69e-17!73;UBERON:0003080!2.30e-15!40;UBERON:0002020!3.10e-15!34;UBERON:0000033!9.91e-15!63;UBERON:0002780!9.98e-15!39;UBERON:0001890!9.98e-15!39;UBERON:0006240!9.98e-15!39;UBERON:0002346!6.69e-14!71;UBERON:0003075!6.69e-14!71;UBERON:0007284!6.69e-14!71;UBERON:0004121!1.98e-13!102;UBERON:0000924!1.98e-13!102;UBERON:0006601!1.98e-13!102;UBERON:0002791!2.81e-13!29;UBERON:0003528!2.81e-13!29;UBERON:0001893!2.81e-13!29;UBERON:0007811!2.16e-12!86;UBERON:0003056!5.00e-12!49;UBERON:0000153!9.74e-11!94;UBERON:0000956!7.29e-10!21;UBERON:0001869!7.29e-10!21;UBERON:0000203!7.29e-10!21;UBERON:0000025!8.34e-09!114;UBERON:0002619!9.26e-09!17;UBERON:0002021!2.82e-08!10;UBERON:0000411!2.82e-08!10;UBERON:0001950!2.82e-08!10;UBERON:0004111!6.30e-08!122;UBERON:0000477!7.17e-08!154;UBERON:0000475!4.66e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.04e-28,54;UBERON:0001017,6.89e-26,73;UBERON:0001049,5.22e-25,52;UBERON:0005068,5.22e-25,52;UBERON:0006241,5.22e-25,52;UBERON:0007135,5.22e-25,52;UBERON:0001016,5.31e-25,75;UBERON:0000955,6.87e-24,47;UBERON:0006238,6.87e-24,47;UBERON:0002021,1.90e-23,10;UBERON:0000411,1.90e-23,10;UBERON:0001950,1.90e-23,10;UBERON:0002616,2.51e-22,46;UBERON:0002346,1.01e-20,64;UBERON:0003075,1.01e-20,64;UBERON:0007284,1.01e-20,64;UBERON:0003080,1.06e-19,40;UBERON:0004121,1.60e-19,95;UBERON:0000924,1.60e-19,95;UBERON:0006601,1.60e-19,95;UBERON:0002020,5.82e-19,34;UBERON:0002780,3.73e-18,39;UBERON:0001890,3.73e-18,39;UBERON:0006240,3.73e-18,39;UBERON:0003528,4.44e-18,29;UBERON:0002791,4.44e-18,29;UBERON:0001893,4.44e-18,29;UBERON:0010371,2.35e-17,73;UBERON:0003056,9.77e-17,49;UBERON:0002619,9.76e-16,17;UBERON:0000956,9.28e-15,21;UBERON:0001869,9.28e-15,21;UBERON:0000203,9.28e-15,21;UBERON:0010314,2.00e-12,92;UBERON:0002950,3.67e-09,4;UBERON:0001891,3.67e-09,4;UBERON:0009616,3.67e-09,4;UBERON:0010286,3.67e-09,4;UBERON:0000025,5.49e-08,114;UBERON:0002038,3.76e-07,3;UBERON:0009663,3.76e-07,3;UBERON:0009661,3.76e-07,3;UBERON:0000125,3.76e-07,3;UBERON:0002308,3.76e-07,3;UBERON:0004111,4.55e-07,122;UBERON:0004684,4.59e-07,3;UBERON:0002275,4.59e-07,3
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,1.29123323441576,0.140788722151667,0,0.34243593645101,0.717949430958028,0.684802919724823,1.31130603628496,0.666219523631325,0.202475267389826,0.699561878128147,0.473193248037357,0.411343300817216,0,1.19060606211498,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,1.43752564364972,1.00669563634642,0,0,0.257259436035947,0.573066879877513,0,0,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0,0,0.622137673850866,0.810035629990144,0.210324961351382,1.99955689082663,1.32521124570968,0.367472397644862,0.670918297127655,0.919218786610021,1.10115880999389,2.17068474744819,1.84327839907492,0.527545150920775,0.640413505216868,0.52091337055676,1.67509799400829,2.8138130501584,1.22238598221448,0.589257170947335,0.427115042397309,0.559198337475902,0.302904773332736,0.226714680320357,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.502666365318702,0.494389935468748,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0.878342391034642,1.46612694769419,0,0.11981512450592,0.599902730993408,0.254140454146129,2.24685959107234,4.57500602818627,0.376963056338593,4.34560800480691,6.39288643325826,2.0778804455956,4.2182728397617,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.584799949701329,0,0.402619256281115,4.41608891984667,0.308713837137853,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.123397163921801,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,0.287696137450811,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,1.76605648986571,1.75817529888305,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,1.92792789853084,0.141940085208269,0.712262414669021,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0.23467170806371,0.42366414172764,0,0.49465875882444,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0,1.66882771809459,0.683483523191411,0,0.370389054739423,0.565105371014073,0.27338845544205,0.228778173206523,1.01987057996313,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.629156066554265,0.483168241652012,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.504832249740738,0.228620419965,0.504130925684203,0.38983152295901,0.481059208201647,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.579568782096571,0.750729901804728,0,0.214368379079066,0,2.25900737046827,3.68260189205742,4.01026859407578,2.749650917499,3.42541259885321,2.2661816921691,4.05013500139084,4.95353323546643,4.98456649882625,6.21312374102184,0.103787347584177,0,0.341467211508268,0,0.628839487883947,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0.754505365544305,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.474540072496697,0.0985044823755635,0.818462086339379,0,0.385813221962283,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0,0.231867835620421
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|short_description=p4@Gba2
|short_description=p4@Gba2
}}
}}

Latest revision as of 00:23, 27 September 2015

Short description:p4@Gba2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gba2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -15bp_to_ENSMUST00000130443_5end
EntrezGene:Gba2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gba2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra3.76e-073
raphe nuclei neuron4.59e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.04e-2854
central nervous system6.89e-2673
neural tube5.22e-2552
neural rod5.22e-2552
future spinal cord5.22e-2552
neural keel5.22e-2552
nervous system5.31e-2575
brain6.87e-2447
future brain6.87e-2447
occipital lobe1.90e-2310
visual cortex1.90e-2310
neocortex1.90e-2310
regional part of brain2.51e-2246
neurectoderm1.01e-2064
neural plate1.01e-2064
presumptive neural plate1.01e-2064
anterior neural tube1.06e-1940
ectoderm-derived structure1.60e-1995
ectoderm1.60e-1995
presumptive ectoderm1.60e-1995
gray matter5.82e-1934
regional part of forebrain3.73e-1839
forebrain3.73e-1839
future forebrain3.73e-1839
brain grey matter4.44e-1829
regional part of telencephalon4.44e-1829
telencephalon4.44e-1829
ecto-epithelium2.35e-1773
pre-chordal neural plate9.77e-1749
regional part of cerebral cortex9.76e-1617
cerebral cortex9.28e-1521
cerebral hemisphere9.28e-1521
pallium9.28e-1521
structure with developmental contribution from neural crest2.00e-1292
regional part of midbrain3.67e-094
midbrain3.67e-094
presumptive midbrain3.67e-094
midbrain neural tube3.67e-094
tube5.49e-08114
substantia nigra3.76e-073
telencephalic nucleus3.76e-073
midbrain nucleus3.76e-073
neural nucleus3.76e-073
nucleus of brain3.76e-073
anatomical conduit4.55e-07122
raphe nuclei4.59e-073
reticular formation4.59e-073
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