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FFCP PHASE1:Mm9::chr11:116274329..116274383,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:116274329..116274383,- |short_description=p1@Rnf157 |description=CAGE_peak_1_at_Rnf157_5end |association_with_transcript=0bp_to_ENSMUST00000149682,NM_0272...")
 
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{{FFCP
{{FFCP
|id=chr11:116274329..116274383,-
|DHSsupport=NA
|short_description=p1@Rnf157
|DPIdataset=NA
|description=CAGE_peak_1_at_Rnf157_5end
|association_with_transcript=0bp_to_ENSMUST00000149682,NM_027258,uc007mky.2,uc007mla.1_5end
|EntrezGene=217340
|EntrezGene=217340
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2AAN9
|UniProt=A2AAN9
|association_with_transcript=0bp_to_ENSMUST00000149682,NM_027258,uc007mky.2,uc007mla.1_5end
|cluster_id=chr11:116274329..116274383,-
|description=CAGE_peak_1_at_Rnf157_5end
|id=chr11:116274329..116274383,-
|ontology_enrichment_celltype=CL:0000540!1.24e-15!33;CL:0000047!1.24e-15!33;CL:0000031!1.24e-15!33;CL:0000404!1.24e-15!33;CL:0002319!2.13e-15!43;CL:0000221!3.43e-15!44;CL:0000133!3.43e-15!44;CL:0000055!3.20e-13!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000117!4.94e-13!23;CL:0000337!4.94e-13!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0002319,2.12e-15,43;CL:0000221,3.41e-15,44;CL:0000133,3.41e-15,44;CL:0000393,4.65e-13,39;CL:0000211,4.65e-13,39;CL:0000117,4.91e-13,23;CL:0000337,4.91e-13,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.96e-30,73;UBERON:0001016,3.98e-29,75;UBERON:0004121,2.40e-26,95;UBERON:0000924,2.40e-26,95;UBERON:0006601,2.40e-26,95;UBERON:0002346,2.10e-25,64;UBERON:0003075,2.10e-25,64;UBERON:0007284,2.10e-25,64;UBERON:0000073,2.43e-22,54;UBERON:0001049,5.77e-21,52;UBERON:0005068,5.77e-21,52;UBERON:0006241,5.77e-21,52;UBERON:0007135,5.77e-21,52;UBERON:0010371,3.89e-20,73;UBERON:0002020,2.75e-18,34;UBERON:0000955,5.98e-18,47;UBERON:0006238,5.98e-18,47;UBERON:0003056,7.54e-18,49;UBERON:0002616,2.29e-17,46;UBERON:0003528,1.88e-15,29;UBERON:0002791,1.88e-15,29;UBERON:0001893,1.88e-15,29;UBERON:0003080,9.68e-15,40;UBERON:0002780,4.22e-14,39;UBERON:0001890,4.22e-14,39;UBERON:0006240,4.22e-14,39;UBERON:0010314,2.36e-13,92;UBERON:0000956,2.51e-11,21;UBERON:0001869,2.51e-11,21;UBERON:0000203,2.51e-11,21;UBERON:0002619,2.82e-09,17;UBERON:0002021,9.27e-08,10;UBERON:0000411,9.27e-08,10;UBERON:0001950,9.27e-08,10;UBERON:0003076,4.87e-07,12;UBERON:0003057,4.87e-07,12
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75897364,9.12050930868271,7.94200754194069,7.77804753376191,6.32883135040882,5.23763989021412,3.99014611395563,7.42164993610516,7.34015410979976,4.1069300540421,5.76060012515731,5.37218905067903,6.08175645870493,7.60061083019722,6.62596197186755,8.77230808770659,7.54989148168807,9.73583141111748,7.38447635872886,7.06765149637033,8.30654192539498,5.44461399738939,5.06780979846713,4.71438024037614,4.55819918508119,2.72076460338254,3.10780334723691,0.897138566094757,2.01461539636894,5.40930863290133,3.19060208267009,3.29672923681077,2.35805216986972,7.02200945649509,42.35638819628,42.8102469951675,46.4045365885911,45.0255337740462,60.2872617398165,67.985450765073,52.6517550180809,58.9920776223729,53.0176618511519,67.3088405277366,8.40677515431831,17.1580695562443,9.21961471072325,9.48116196566347,9.01336599300324,8.82448840560068,8.00088220085815,9.27157757575024,6.73930340142812,10.1078884705519,8.87177549615839,8.29955902098735,7.39767909012071,8.9635213366817,9.24711050185374,10.9547548995107,9.50251472747815,8.87382414133043,8.65380391686944,8.24313952752625,6.17164654293748,6.21165321557681,6.67621331852499,8.28474574804273,9.2227192807024,8.79991922073436,6.40247905054704,6.83981249738391,7.4692262615224,9.53941861818155,9.84670650430645,8.66839444904958,8.18462086339379,8.2116525828562,7.33045121728337,17.7365510335942,8.65546951248011,6.66100267549725,5.54736162999646,9.04424818390014,6.95603506861264
|phase1_expression=7.36684696682052,0,0,0,0,6.71517087647559,4.90586545250604,2.45334314538995,3.801295498095,9.36258105287974,7.0199366972457,11.8062795313098,2.73921167889929,5.85716696207283,9.66018309265422,6.2767332890846,8.39474253753776,12.7762176970086,11.1062691220648,11.4585205985468,10.5453679787327,8.73760370567791,9.14199261986274,2.07990149631429,1.60586496747019,0,0.430761996159075,1.939241094173,0.570070258369122,0.252030129759931,2.43903561720835,21.5910428976275,27.0628506537211,0,2.02196133825892,1.66234645358492,2.04169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0,0,0.485510353031154,6.92432498865675,10.44182391561,7.15832333430558,10.9534788208725,9.59310688073965,6.37089929929968,7.19390626574849,6.57936181639204,10.062679505548,9.56360854529097,1.45072428402269,2.68875039313971,1.80081605225163,6.5902691185914,2.06268836910977,25.4918740683093,26.9785399428737,31.0577387718028,4.06613438482959,2.66788438833342,13.498495759221,8.89979726310277,10.6572017241915,14.3808053048834,14.9845139075406,23.6412316063329,28.2162411113233,21.8737959805437,47.7037143954352,37.5476519617743,24.3756690437759,20.5109307979026,29.4150011715207,48.450987639731,60.523798252379,51.4581886408416,24.1351906546255,22.5059603261928,16.1483144872596,51.0904888172527,21.3849791812038,42.7835093775068,38.3017161115768,35.0234334765793,25.7231235238915,3.86203585999239,8.76630097238712,13.0439019915755,6.88339101585109,0,0,1.29955283489534,1.34408066129201,8.98844288843212,2.21559419351475,2.33807404142582,1.06001872353102,6.76048414928066,6.41632387071589,17.8363667794652,14.2213340630666,4.32982082022428,3.04031838570118,5.56076889516262,2.8545969929765,8.54495016035667,3.41416919849097,5.20455980298408,3.65358573974569,4.15107895060905,5.27529241934179,3.05730638552832,2.13633205260448,11.1237735480468,2.02439099687876,4.42305275974937,9.22071044700232,10.6003928860989,5.33362778448744,0,24.8863677459815,19.4785437336513,2.29911349687732,4.55297473122497,3.59941638596045,2.92261522268049,52.7263050704976,49.8675657072303,31.539242380329,57.0143770230667,43.9830586608169,47.5834622041393,39.7491094516006,6.41587992256993,5.59831367745419,14.1524744722858,15.3622554797126,10.9301172088671,10.3455946995063,12.9644733459851,12.2070902446929,12.3146063463903,12.9394857487698,16.3041000733928,25.8703370739016,9.48499168904506,13.0483195315795,12.6684809398043,10.9597866213787,5.56094498451196,6.61679116392116,5.76189981942242,7.56330213910274,3.51106593656617,2.83082697826187,3.9782889915383,6.42089894860056,5.15957331958412,2.70093092191522,6.15536312521547,5.1158700254325,5.09081472528348,4.41814495025775,7.24338183778972,3.26942958628075,5.43047504714485,3.61168420974009,3.81023404865522,3.21639972335731,4.61055242111206,4.02619256281115,48.9975580154416,22.2273962739254,0.330418782983798,1.32225283331772,10.8777007772969,9.75394021813842,12.7578786708872,10.6892268050372,9.11749979763968,8.94060442729028,2.37264530772256,6.75265714368445,2.76468729680296,4.17808591286417,3.70431765526328,1.79763881730844,2.16138049874694,1.59313018603494,6.44870863240478,9.48262654660749,15.7790829942313,5.90588850751411,5.43066964069352,5.6810014111158,4.61626721007078,2.50937251565324,2.98297582898612,1.35736880313981,1.48226313543574,4.00428253718626,2.75182593158484,2.24862112384854,1.21716072833102,1.20588579876208,1.52775511068852,1.72617682470486,1.13494658742525,1.09824565275233,2.87536413054709,2.60498663367952,1.24815069245824,2.52578877947112,1.61457672169721,0.482443521363367,2.21703828199926,8.90609635321278,10.4297584922897,8.14776411720903,6.33663670378956,4.85768146581266,1.6663054862021,2.53673742215138,5.99013547603526,5.09368786192182,5.58091690301205,2.45794972073607,2.24490476425664,1.88043776155965,6.03165135757089,6.52686820582452,1.47529281905711,0.827810238914197,53.4633464659347,46.2986162039203,10.1639666133539,4.79694761688309,12.9358369960665,11.3227235846025,12.9254038639679,17.2057534525837,14.0363164671908,13.3045969470751,12.1443210502468,12.5670018901864,16.2067988958075,39.8438432363041,1.41940085208269,5.34196811001766,5.37526965866801,6.26886467295635,1.32745138339963,5.34117399540959,4.53485335447127,2.07465587731488,3.54362271456927,3.68922177532713,4.39328098385976,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,0,6.80879211507576,6.66226047915848,8.14959707831353,3.85806663056866,5.85222771019503,7.49149033928696,8.72109809191241,5.78483403317739,3.05073220482823,5.71946591332314,7.71849393192367,3.46261131177108,4.03661066739764,4.22190474497091,3.81991500810037,5.74493149107714,1.1659233465194,55.9984412071739,7.17657699350981,7.63631411463923,3.1483069652851,7.72310673719233,7.92826520781946,5.26189798375002,3.56954702987096,4.3384950220334,2.76399947608848,0.954670618015114,11.0717597753397,6.91286188231286,6.26430976766447,3.97267762427491,2.62035076495413,6.60835297285622,3.88471241909079,1.57053565190418,2.20345454596048,1.24267862617385,12.9649375897364,9.12050930868271,7.94200754194069,7.77804753376191,6.32883135040882,5.23763989021412,3.99014611395563,7.42164993610516,7.34015410979976,4.1069300540421,5.76060012515731,5.37218905067903,6.08175645870493,7.60061083019722,6.62596197186755,8.77230808770659,7.54989148168807,9.73583141111748,7.38447635872886,7.06765149637033,8.30654192539498,5.44461399738939,5.06780979846713,4.71438024037614,4.55819918508119,2.72076460338254,3.10780334723691,0.897138566094757,2.01461539636894,5.40930863290133,3.19060208267009,3.29672923681077,2.35805216986972,7.02200945649509,42.35638819628,42.8102469951675,46.4045365885911,45.0255337740462,60.2872617398165,67.985450765073,52.6517550180809,58.9920776223729,53.0176618511519,67.3088405277366,8.40677515431831,17.1580695562443,9.21961471072325,9.48116196566347,9.01336599300324,8.82448840560068,8.00088220085815,9.27157757575024,6.73930340142812,10.1078884705519,8.87177549615839,8.29955902098735,7.39767909012071,8.9635213366817,9.24711050185374,10.9547548995107,9.50251472747815,8.87382414133043,8.65380391686944,8.24313952752625,6.17164654293748,6.21165321557681,6.67621331852499,8.28474574804273,9.2227192807024,8.79991922073436,6.40247905054704,6.83981249738391,7.4692262615224,9.53941861818155,9.84670650430645,8.66839444904958,8.18462086339379,8.2116525828562,7.33045121728337,17.7365510335942,8.65546951248011,6.66100267549725,5.54736162999646,9.04424818390014,6.95603506861264
|short_description=p1@Rnf157
}}
}}

Latest revision as of 00:17, 27 September 2015

Short description:p1@Rnf157
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf157_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000149682, NM_027258, uc007mky.2, uc007mla.1_5end
EntrezGene:Rnf157
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf157

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.44
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F360.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E451.09
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.72
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F98.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A610.60
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.89
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A452.73
corpus striatum, adult.CNhs10487.19-21D849.87
corpus striatum, neonate N00.CNhs11226.630-43F131.54
cortex, adult.CNhs10473.12-14D557.01
cortex, neonate N30.CNhs11107.1392-42F243.98
diencephalon, adult.CNhs10482.20-12F247.58
diencephalon, neonate N30.CNhs11201.1388-42B239.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G415.36
eyeball, embryo E12.CNhs11016.345-16C610.93
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C912.96
eyeball, embryo E17.CNhs11023.1261-18D412.21
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G816.30
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E212.67
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E849.00
hippocampus, neonate N00.CNhs11228.627-43G122.23
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C253.46
medulla oblongata, neonate N30.CNhs11200.1396-42A346.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.21
olfactory brain, adult.CNhs10489.18-22I939.84
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C956.00
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C17.64
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G35.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E311.07
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D46.26
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F59.12
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I47.42
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I27.60
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F89.74
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C47.07
thymus, neonate N07.CNhs11211.713-19D38.31
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D745.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A652.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.99
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A967.31
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.50
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.23e-1533
neuronal stem cell1.23e-1533
neuroblast1.23e-1533
electrically signaling cell1.23e-1533
neural cell2.12e-1543
ectodermal cell3.41e-1544
neurectodermal cell3.41e-1544
electrically responsive cell4.65e-1339
electrically active cell4.65e-1339
CNS neuron (sensu Vertebrata)4.91e-1323
neuroblast (sensu Vertebrata)4.91e-1323

Uber anatomy
Ontology termp-valuen
central nervous system8.96e-3073
nervous system3.98e-2975
ectoderm-derived structure2.40e-2695
ectoderm2.40e-2695
presumptive ectoderm2.40e-2695
neurectoderm2.10e-2564
neural plate2.10e-2564
presumptive neural plate2.10e-2564
regional part of nervous system2.43e-2254
neural tube5.77e-2152
neural rod5.77e-2152
future spinal cord5.77e-2152
neural keel5.77e-2152
ecto-epithelium3.89e-2073
gray matter2.75e-1834
brain5.98e-1847
future brain5.98e-1847
pre-chordal neural plate7.54e-1849
regional part of brain2.29e-1746
brain grey matter1.88e-1529
regional part of telencephalon1.88e-1529
telencephalon1.88e-1529
anterior neural tube9.68e-1540
regional part of forebrain4.22e-1439
forebrain4.22e-1439
future forebrain4.22e-1439
structure with developmental contribution from neural crest2.36e-1392
cerebral cortex2.51e-1121
cerebral hemisphere2.51e-1121
pallium2.51e-1121
regional part of cerebral cortex2.82e-0917
occipital lobe9.27e-0810
visual cortex9.27e-0810
neocortex9.27e-0810
posterior neural tube4.87e-0712
chordal neural plate4.87e-0712
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