Personal tools

FFCP PHASE1:Mm9::chr6:23789491..23789514,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320405
|EntrezGene=320405
|HGNC=
|HGNC=
|MCL_coexpression_id=1473
|TSSclassifier=NA
|UniProt=A4PI80,A4PI81,Q8BYR5
|UniProt=A4PI80,A4PI81,Q8BYR5
|association_with_transcript=-70bp_to_ENSMUST00000164608,NM_001252105,NM_001252106,NM_001252107,NM_001252108,NM_001252109,NM_001252110,NM_153163_5end
|association_with_transcript=-70bp_to_ENSMUST00000164608,NM_001252105,NM_001252106,NM_001252107,NM_001252108,NM_001252109,NM_001252110,NM_153163_5end
|cluster_id=chr6:23789491..23789514,-
|description=CAGE_peak_3_at_Cadps2_5end
|description=CAGE_peak_3_at_Cadps2_5end
|id=chr6:23789491..23789514,-
|id=chr6:23789491..23789514,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!9.34e-13!63;UBERON:0000955!6.39e-11!50;UBERON:0006238!6.39e-11!50;UBERON:0002616!9.85e-11!49;UBERON:0001049!2.09e-10!52;UBERON:0005068!2.09e-10!52;UBERON:0006241!2.09e-10!52;UBERON:0007135!2.09e-10!52;UBERON:0002346!9.93e-10!71;UBERON:0003075!9.93e-10!71;UBERON:0007284!9.93e-10!71;UBERON:0003056!1.01e-09!49;UBERON:0001017!1.94e-09!73;UBERON:0005743!1.94e-09!73;UBERON:0003080!2.83e-09!40;UBERON:0002780!5.73e-09!39;UBERON:0001890!5.73e-09!39;UBERON:0006240!5.73e-09!39;UBERON:0000073!2.03e-08!75;UBERON:0001016!2.03e-08!75;UBERON:0000160!7.92e-08!43;UBERON:0004121!1.13e-07!102;UBERON:0000924!1.13e-07!102;UBERON:0006601!1.13e-07!102;UBERON:0005409!1.24e-07!59;UBERON:0002021!1.44e-07!10;UBERON:0000411!1.44e-07!10;UBERON:0001950!1.44e-07!10;UBERON:0002020!5.09e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.69e-12,54;UBERON:0011216,5.46e-11,194;UBERON:0001049,1.81e-10,52;UBERON:0005068,1.81e-10,52;UBERON:0006241,1.81e-10,52;UBERON:0007135,1.81e-10,52;UBERON:0000955,5.85e-10,47;UBERON:0006238,5.85e-10,47;UBERON:0002346,7.25e-10,64;UBERON:0003075,7.25e-10,64;UBERON:0007284,7.25e-10,64;UBERON:0002616,9.73e-10,46;UBERON:0010371,1.73e-09,73;UBERON:0001017,1.93e-09,73;UBERON:0003080,2.45e-09,40;UBERON:0002780,5.59e-09,39;UBERON:0001890,5.59e-09,39;UBERON:0006240,5.59e-09,39;UBERON:0002021,6.25e-09,10;UBERON:0000411,6.25e-09,10;UBERON:0001950,6.25e-09,10;UBERON:0001016,9.38e-09,75;UBERON:0003056,2.15e-08,49;UBERON:0004121,2.33e-08,95;UBERON:0000924,2.33e-08,95;UBERON:0006601,2.33e-08,95;UBERON:0004111,2.69e-07,122;UBERON:0002020,4.91e-07,34;UBERON:0000344,4.95e-07,15;UBERON:0007023,9.17e-07,51
|phase1_expression=2.88267924788629,2.44282785347553,1.36499771816861,1.51232105653415,5.00895729946347,6.5472916045637,4.43864017131499,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,3.14660173558958,0,0,3.83981814704176,2.2940928106717,2.29692785646008,3.4460959692726,3.23206849028834,3.6104449696711,4.53654233567875,3.10422714917427,0,0,0,7.51014211353314,4.48833542467929,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0,0.286533439938757,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.405017814995072,0.841299845405528,1.14260393761521,1.76694832761291,0.122490799214954,0.287536413054709,0.919218786610021,5.50579404996943,3.19218345212969,4.30098293117482,1.05509030184155,1.64677758484337,1.04182674111352,3.62937898701795,7.31591393041184,5.80633341551878,3.53554302568401,2.70506193518296,1.86399445825301,0,0,4.34796733052517,1.72084775396277,0,1.61910957491345,1.94932925234301,1.79210754838934,2.24711072210803,0,0,0,2.67602497575693,0,0,0,1.29894624606728,1.52015919285059,1.01104889002957,2.2836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0.247194967734374,1.01219549843938,0,0.161766849947409,0,0,0,16.3957246326466,18.431310199584,3.57639877292028,0.11981512450592,0,0.254140454146129,2.84602214869163,2.74500361691176,0.376963056338593,7.12679712788333,4.85859368927628,3.32460871295296,4.54275536589721,2.03678727700633,1.24406970610093,1.0108910337347,24.8321389946039,0.780722657776222,0.689706313300419,0.900310649026746,1.20563854268572,0.816437989815934,0.640568601424249,1.3118241438362,7.24369438069244,0.215567992932842,1.32374256117473,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0,0.439100230582101,0.536825675041487,5.67782861123144,1.85228302282712,0.660837565967596,4.23120906661671,0.213288250535234,0.232236671860439,0.38660238396628,0.605050573870028,0.889512175379481,0.951128130562796,5.21981967698963,0.823494773620054,2.26201687920243,1.98956472041151,2.14460495831032,5.39291645192533,3.8904848977445,3.78368419183298,0.379335801906163,0.913988100877831,0,1.62921062276251,1.93952487167626,3.15611189506434,2.84564417059158,2.80459281161244,1.41298855057237,2.09775178667061,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,2.87536413054709,1.48856379067401,0,0.252578877947112,0.896987067609561,1.4473305640901,3.14080423283228,0.37898282354097,2.11854469374634,1.35796068620151,1.87752198630802,2.1775813467436,3.57065461329021,3.90267295715598,2.36452716159286,1.7717175171902,3.18909537314974,2.29408640602033,1.72684981865896,2.60368305446721,0,0,3.93411418415229,3.58717770196152,1.28440471990234,1.05490517932983,0,0.504941854408746,0.94652465824877,1.95219372148319,3.01592756825919,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.790575555893047,1.92792789853084,1.13552068166615,1.06839362200353,1.62886959353576,1.64970122972535,3.98235415019888,0.971122544619926,1.209294227859,2.45186603682668,0.590603785761546,1.84461088766356,2.84271122485043,1.81766864738753,3.20847640546249,3.16036757935816,4.21674434299995,0,6.46835250932197,0.720244376125241,1.03486947026204,2.7863814554107,4.25616560741457,3.74574516964348,5.43011767986999,2.43571959291679,0,0,9.04166432025344,0.16488625294148,0.484393280087717,0,0,0.164140899745061,3.78925087618806,0.927126510052548,0,0.82554747185289,0.925972636848558,0.376736914009382,0,0.228778173206523,2.20971958992012,0.69975726161829,0.829199842826543,0.954670618015114,0.474503990371703,1.01659733563424,2.26811215725783,3.13632444021703,3.27543845619266,2.56242258131159,4.54594006489348,2.35580347785627,1.42576470620972,17.3975007664339,0,0,0,0,0.645799117388655,0.168956125490778,0.821500670520278,0.651021924219751,1.04859344425711,0.724752362478018,0.288030006257865,0,0.405450430580328,0.205421914329655,0.51968329191118,0.537080087002444,0.198681354781265,0.600977247599844,0,0,0.381034033274999,0,0.292373642219257,0,0.116876902181569,1.36038230169127,0,0.179427713218951,0,2.12508553435409,4.31669693537719,0.549454872801795,0.214368379079066,7.02200945649509,8.471277639256,6.90487854760765,4.58316410751517,6.8741272937475,8.22099023724771,9.06472676867641,8.10027000278167,4.95353323546643,7.25027854374727,5.1776031175182,0.31136204275253,0.798049746802062,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.824140228955577,0,1.01078884705519,0.760437899670719,0.754505365544305,0.655490552289177,0.832326981263301,0.746661096422973,1.42888107384922,1.15884325944855,1.15745532278223,0,0.735994600671987,1.37147700954166,0.70990322463735,1.43061713968393,0.436039249896986,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.711810108745045,0.689531376628944,1.22769312950907,0.77468420592983,0.578719832943424,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.441182838239031,0
|phase1_expression=2.88267924788629,2.44282785347553,1.36499771816861,1.51232105653415,5.00895729946347,6.5472916045637,4.43864017131499,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,3.14660173558958,0,0,3.83981814704176,2.2940928106717,2.29692785646008,3.4460959692726,3.23206849028834,3.6104449696711,4.53654233567875,3.10422714917427,0,0,0,7.51014211353314,4.48833542467929,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0,0.286533439938757,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.405017814995072,0.841299845405528,1.14260393761521,1.76694832761291,0.122490799214954,0.287536413054709,0.919218786610021,5.50579404996943,3.19218345212969,4.30098293117482,1.05509030184155,1.64677758484337,1.04182674111352,3.62937898701795,7.31591393041184,5.80633341551878,3.53554302568401,2.70506193518296,1.86399445825301,0,0,4.34796733052517,1.72084775396277,0,1.61910957491345,1.94932925234301,1.79210754838934,2.24711072210803,0,0,0,2.67602497575693,0,0,0,1.29894624606728,1.52015919285059,1.01104889002957,2.2836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0.247194967734374,1.01219549843938,0,0.161766849947409,0,0,0,16.3957246326466,18.431310199584,3.57639877292028,0.11981512450592,0,0.254140454146129,2.84602214869163,2.74500361691176,0.376963056338593,7.12679712788333,4.85859368927628,3.32460871295296,4.54275536589721,2.03678727700633,1.24406970610093,1.0108910337347,24.8321389946039,0.780722657776222,0.689706313300419,0.900310649026746,1.20563854268572,0.816437989815934,0.640568601424249,1.3118241438362,7.24369438069244,0.215567992932842,1.32374256117473,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0,0.439100230582101,0.536825675041487,5.67782861123144,1.85228302282712,0.660837565967596,4.23120906661671,0.213288250535234,0.232236671860439,0.38660238396628,0.605050573870028,0.889512175379481,0.951128130562796,5.21981967698963,0.823494773620054,2.26201687920243,1.98956472041151,2.14460495831032,5.39291645192533,3.8904848977445,3.78368419183298,0.379335801906163,0.913988100877831,0,1.62921062276251,1.93952487167626,3.15611189506434,2.84564417059158,2.80459281161244,1.41298855057237,2.09775178667061,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,2.87536413054709,1.48856379067401,0,0.252578877947112,0.896987067609561,1.4473305640901,3.14080423283228,0.37898282354097,2.11854469374634,1.35796068620151,1.87752198630802,2.1775813467436,3.57065461329021,3.90267295715598,2.36452716159286,1.7717175171902,3.18909537314974,2.29408640602033,1.72684981865896,2.60368305446721,0,0,3.93411418415229,3.58717770196152,1.28440471990234,1.05490517932983,0,0.504941854408746,0.94652465824877,1.95219372148319,3.01592756825919,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.790575555893047,1.92792789853084,1.13552068166615,1.06839362200353,1.62886959353576,1.64970122972535,3.98235415019888,0.971122544619926,1.209294227859,2.45186603682668,0.590603785761546,1.84461088766356,2.84271122485043,1.81766864738753,3.20847640546249,3.16036757935816,4.21674434299995,0,6.46835250932197,0.720244376125241,1.03486947026204,2.7863814554107,4.25616560741457,3.74574516964348,5.43011767986999,2.43571959291679,0,0,9.04166432025344,0.16488625294148,0.484393280087717,0,0,0.164140899745061,3.78925087618806,0.927126510052548,0,0.82554747185289,0.925972636848558,0.376736914009382,0,0.228778173206523,2.20971958992012,0.69975726161829,0.829199842826543,0.954670618015114,0.474503990371703,1.01659733563424,2.26811215725783,3.13632444021703,3.27543845619266,2.56242258131159,4.54594006489348,2.35580347785627,1.42576470620972,17.3975007664339,0,0,0,0,0.645799117388655,0.168956125490778,0.821500670520278,0.651021924219751,1.04859344425711,0.724752362478018,0.288030006257865,0,0.405450430580328,0.205421914329655,0.51968329191118,0.537080087002444,0.198681354781265,0.600977247599844,0,0,0.381034033274999,0,0.292373642219257,0,0.116876902181569,1.36038230169127,0,0.179427713218951,0,2.12508553435409,4.31669693537719,0.549454872801795,0.214368379079066,7.02200945649509,8.471277639256,6.90487854760765,4.58316410751517,6.8741272937475,8.22099023724771,9.06472676867641,8.10027000278167,4.95353323546643,7.25027854374727,5.1776031175182,0.31136204275253,0.798049746802062,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.824140228955577,0,1.01078884705519,0.760437899670719,0.754505365544305,0.655490552289177,0.832326981263301,0.746661096422973,1.42888107384922,1.15884325944855,1.15745532278223,0,0.735994600671987,1.37147700954166,0.70990322463735,1.43061713968393,0.436039249896986,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.711810108745045,0.689531376628944,1.22769312950907,0.77468420592983,0.578719832943424,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.441182838239031,0
|short_description=p3@Cadps2
|short_description=p3@Cadps2
}}
}}

Latest revision as of 00:10, 27 September 2015

Short description:p3@Cadps2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cadps2_5end
Coexpression cluster:MCL_coexpression_mm9:1473
Association with transcript: -70bp_to_ENSMUST00000164608, NM_001252105, NM_001252106, NM_001252107, NM_001252108, NM_001252109, NM_001252110, NM_153163_5end
EntrezGene:Cadps2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cadps2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.40
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G424.83
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.69e-1254
organ system subdivision5.46e-11194
neural tube1.81e-1052
neural rod1.81e-1052
future spinal cord1.81e-1052
neural keel1.81e-1052
brain5.85e-1047
future brain5.85e-1047
neurectoderm7.25e-1064
neural plate7.25e-1064
presumptive neural plate7.25e-1064
regional part of brain9.73e-1046
ecto-epithelium1.73e-0973
central nervous system1.93e-0973
anterior neural tube2.45e-0940
regional part of forebrain5.59e-0939
forebrain5.59e-0939
future forebrain5.59e-0939
occipital lobe6.25e-0910
visual cortex6.25e-0910
neocortex6.25e-0910
nervous system9.38e-0975
pre-chordal neural plate2.15e-0849
ectoderm-derived structure2.33e-0895
ectoderm2.33e-0895
presumptive ectoderm2.33e-0895
anatomical conduit2.69e-07122
gray matter4.91e-0734
mucosa4.95e-0715
adult organism9.17e-0751
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:23789491..23789514,-&oldid=4281925"