FFCP PHASE1:Mm9::chr11:116060167..116060217,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69535 | |EntrezGene=69535 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D7K2 | |UniProt=Q9D7K2 | ||
|association_with_transcript=0bp_to_ENSMUST00000021130,ENSMUST00000124663,NM_027107,uc007mkn.2_5end | |association_with_transcript=0bp_to_ENSMUST00000021130,ENSMUST00000124663,NM_027107,uc007mkn.2_5end | ||
|cluster_id=chr11:116060167..116060217,+ | |||
|description=CAGE_peak_1_at_2310004N24Rik_5end | |description=CAGE_peak_1_at_2310004N24Rik_5end | ||
|id=chr11:116060167..116060217,+ | |id=chr11:116060167..116060217,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.44e-12!44;CL:0000133!3.44e-12!44;CL:0002319!1.05e-11!43;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000034!2.39e-09!97;CL:0000723!3.87e-09!91;CL:0000048!3.87e-09!91;CL:0000117!4.88e-08!23;CL:0000337!4.88e-08!23;CL:0000144!5.30e-08!121;CL:0000012!5.30e-08!121;CL:0000055!7.95e-08!50;CL:0002371!3.67e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.44e-12,44;CL:0000133,3.44e-12,44;CL:0002319,1.05e-11,43;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000034,2.39e-09,97;CL:0000723,3.87e-09,91;CL:0000048,3.87e-09,91;CL:0000117,4.88e-08,23;CL:0000337,4.88e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-15!75;UBERON:0001016!1.67e-15!75;UBERON:0001017!4.15e-15!73;UBERON:0005743!4.15e-15!73;UBERON:0004121!2.28e-10!102;UBERON:0000924!2.28e-10!102;UBERON:0006601!2.28e-10!102;UBERON:0001049!6.00e-10!52;UBERON:0005068!6.00e-10!52;UBERON:0006241!6.00e-10!52;UBERON:0007135!6.00e-10!52;UBERON:0002020!1.25e-09!34;UBERON:0002616!1.16e-08!49;UBERON:0007811!1.70e-08!86;UBERON:0000955!3.39e-08!50;UBERON:0006238!3.39e-08!50;UBERON:0002780!3.42e-08!39;UBERON:0001890!3.42e-08!39;UBERON:0006240!3.42e-08!39;UBERON:0003080!4.47e-08!40;UBERON:0000033!5.97e-08!63;UBERON:0002346!6.44e-08!71;UBERON:0003075!6.44e-08!71;UBERON:0007284!6.44e-08!71;UBERON:0003056!2.14e-07!49;UBERON:0002791!2.67e-07!29;UBERON:0003528!2.67e-07!29;UBERON:0001893!2.67e-07!29;UBERON:0000153!3.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-15,75;UBERON:0001017,4.15e-15,73;UBERON:0004121,5.35e-12,95;UBERON:0000924,5.35e-12,95;UBERON:0006601,5.35e-12,95;UBERON:0000073,6.76e-11,54;UBERON:0001049,6.00e-10,52;UBERON:0005068,6.00e-10,52;UBERON:0006241,6.00e-10,52;UBERON:0007135,6.00e-10,52;UBERON:0002346,1.10e-09,64;UBERON:0003075,1.10e-09,64;UBERON:0007284,1.10e-09,64;UBERON:0002020,1.25e-09,34;UBERON:0010371,1.55e-08,73;UBERON:0002780,3.42e-08,39;UBERON:0001890,3.42e-08,39;UBERON:0006240,3.42e-08,39;UBERON:0002616,4.32e-08,46;UBERON:0003080,4.47e-08,40;UBERON:0010314,6.43e-08,92;UBERON:0000955,1.24e-07,47;UBERON:0006238,1.24e-07,47;UBERON:0003056,2.14e-07,49;UBERON:0003528,2.67e-07,29;UBERON:0002791,2.67e-07,29;UBERON:0001893,2.67e-07,29 | |||
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| ||
|short_description=p1@2310004N24Rik | |short_description=p1@2310004N24Rik | ||
}} | }} |
Latest revision as of 00:07, 27 September 2015
Short description: | p1@2310004N24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310004N24Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021130, ENSMUST00000124663, NM_027107, uc007mkn.2_5end |
EntrezGene: | 2310004N24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.44e-12 | 44 |
neurectodermal cell | 3.44e-12 | 44 |
neural cell | 1.05e-11 | 43 |
neuron | 1.16e-09 | 33 |
neuronal stem cell | 1.16e-09 | 33 |
neuroblast | 1.16e-09 | 33 |
electrically signaling cell | 1.16e-09 | 33 |
stem cell | 2.39e-09 | 97 |
somatic stem cell | 3.87e-09 | 91 |
multi fate stem cell | 3.87e-09 | 91 |
CNS neuron (sensu Vertebrata) | 4.88e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.88e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.67e-15 | 75 |
central nervous system | 4.15e-15 | 73 |
ectoderm-derived structure | 5.35e-12 | 95 |
ectoderm | 5.35e-12 | 95 |
presumptive ectoderm | 5.35e-12 | 95 |
regional part of nervous system | 6.76e-11 | 54 |
neural tube | 6.00e-10 | 52 |
neural rod | 6.00e-10 | 52 |
future spinal cord | 6.00e-10 | 52 |
neural keel | 6.00e-10 | 52 |
neurectoderm | 1.10e-09 | 64 |
neural plate | 1.10e-09 | 64 |
presumptive neural plate | 1.10e-09 | 64 |
gray matter | 1.25e-09 | 34 |
ecto-epithelium | 1.55e-08 | 73 |
regional part of forebrain | 3.42e-08 | 39 |
forebrain | 3.42e-08 | 39 |
future forebrain | 3.42e-08 | 39 |
regional part of brain | 4.32e-08 | 46 |
anterior neural tube | 4.47e-08 | 40 |
structure with developmental contribution from neural crest | 6.43e-08 | 92 |
brain | 1.24e-07 | 47 |
future brain | 1.24e-07 | 47 |
pre-chordal neural plate | 2.14e-07 | 49 |
brain grey matter | 2.67e-07 | 29 |
regional part of telencephalon | 2.67e-07 | 29 |
telencephalon | 2.67e-07 | 29 |