FFCP PHASE1:Mm9::chr9:64585491..64585570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53869 | |EntrezGene=53869 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WGS1,E9Q6B3,E9PZB2,P62492,Q0PD45,Q78ZJ8 | |UniProt=F8WGS1,E9Q6B3,E9PZB2,P62492,Q0PD45,Q78ZJ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000004892,ENSMUST00000167569,ENSMUST00000171100,ENSMUST00000172298,NM_017382,uc009qce.1_5end | |association_with_transcript=0bp_to_ENSMUST00000004892,ENSMUST00000167569,ENSMUST00000171100,ENSMUST00000172298,NM_017382,uc009qce.1_5end | ||
|cluster_id=chr9:64585491..64585570,- | |||
|description=CAGE_peak_1_at_Rab11a_5end | |description=CAGE_peak_1_at_Rab11a_5end | ||
|id=chr9:64585491..64585570,- | |id=chr9:64585491..64585570,- | ||
|ontology_enrichment_celltype=CL:0000117!8.00e-09!23;CL:0000337!8.00e-09!23;CL:0000055!4.94e-07!50;CL:0000221!6.83e-07!44;CL:0000133!6.83e-07!44;CL:0000540!9.35e-07!33;CL:0000047!9.35e-07!33;CL:0000031!9.35e-07!33;CL:0000404!9.35e-07!33 | |ontology_enrichment_celltype=CL:0000117!8.00e-09!23;CL:0000337!8.00e-09!23;CL:0000055!4.94e-07!50;CL:0000221!6.83e-07!44;CL:0000133!6.83e-07!44;CL:0000540!9.35e-07!33;CL:0000047!9.35e-07!33;CL:0000031!9.35e-07!33;CL:0000404!9.35e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-09,23;CL:0000337,8.00e-09,23;CL:0000221,6.83e-07,44;CL:0000133,6.83e-07,44;CL:0000540,9.35e-07,33;CL:0000047,9.35e-07,33;CL:0000031,9.35e-07,33;CL:0000404,9.35e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.60e-10!73;UBERON:0005743!2.60e-10!73;UBERON:0000073!4.19e-10!75;UBERON:0001016!4.19e-10!75;UBERON:0002020!5.05e-10!34;UBERON:0001049!5.50e-09!52;UBERON:0005068!5.50e-09!52;UBERON:0006241!5.50e-09!52;UBERON:0007135!5.50e-09!52;UBERON:0004121!1.25e-08!102;UBERON:0000924!1.25e-08!102;UBERON:0006601!1.25e-08!102;UBERON:0002616!5.43e-08!49;UBERON:0002791!6.77e-08!29;UBERON:0003528!6.77e-08!29;UBERON:0001893!6.77e-08!29;UBERON:0000955!8.74e-08!50;UBERON:0006238!8.74e-08!50 | |ontology_enrichment_uberon=UBERON:0001017!2.60e-10!73;UBERON:0005743!2.60e-10!73;UBERON:0000073!4.19e-10!75;UBERON:0001016!4.19e-10!75;UBERON:0002020!5.05e-10!34;UBERON:0001049!5.50e-09!52;UBERON:0005068!5.50e-09!52;UBERON:0006241!5.50e-09!52;UBERON:0007135!5.50e-09!52;UBERON:0004121!1.25e-08!102;UBERON:0000924!1.25e-08!102;UBERON:0006601!1.25e-08!102;UBERON:0002616!5.43e-08!49;UBERON:0002791!6.77e-08!29;UBERON:0003528!6.77e-08!29;UBERON:0001893!6.77e-08!29;UBERON:0000955!8.74e-08!50;UBERON:0006238!8.74e-08!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-10,73;UBERON:0001016,4.19e-10,75;UBERON:0002020,5.05e-10,34;UBERON:0000073,5.93e-10,54;UBERON:0001049,5.50e-09,52;UBERON:0005068,5.50e-09,52;UBERON:0006241,5.50e-09,52;UBERON:0007135,5.50e-09,52;UBERON:0004121,8.40e-09,95;UBERON:0000924,8.40e-09,95;UBERON:0006601,8.40e-09,95;UBERON:0010314,3.26e-08,92;UBERON:0003528,6.77e-08,29;UBERON:0002791,6.77e-08,29;UBERON:0001893,6.77e-08,29;UBERON:0010371,4.60e-07,73;UBERON:0002346,5.50e-07,64;UBERON:0003075,5.50e-07,64;UBERON:0007284,5.50e-07,64;UBERON:0002616,9.82e-07,46 | |||
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| ||
|short_description=p1@Rab11a | |short_description=p1@Rab11a | ||
}} | }} |
Latest revision as of 00:03, 27 September 2015
Short description: | p1@Rab11a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab11a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000004892, ENSMUST00000167569, ENSMUST00000171100, ENSMUST00000172298, NM_017382, uc009qce.1_5end |
EntrezGene: | Rab11a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.00e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.00e-09 | 23 |
ectodermal cell | 6.83e-07 | 44 |
neurectodermal cell | 6.83e-07 | 44 |
neuron | 9.35e-07 | 33 |
neuronal stem cell | 9.35e-07 | 33 |
neuroblast | 9.35e-07 | 33 |
electrically signaling cell | 9.35e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.60e-10 | 73 |
nervous system | 4.19e-10 | 75 |
gray matter | 5.05e-10 | 34 |
regional part of nervous system | 5.93e-10 | 54 |
neural tube | 5.50e-09 | 52 |
neural rod | 5.50e-09 | 52 |
future spinal cord | 5.50e-09 | 52 |
neural keel | 5.50e-09 | 52 |
ectoderm-derived structure | 8.40e-09 | 95 |
ectoderm | 8.40e-09 | 95 |
presumptive ectoderm | 8.40e-09 | 95 |
structure with developmental contribution from neural crest | 3.26e-08 | 92 |
brain grey matter | 6.77e-08 | 29 |
regional part of telencephalon | 6.77e-08 | 29 |
telencephalon | 6.77e-08 | 29 |
ecto-epithelium | 4.60e-07 | 73 |
neurectoderm | 5.50e-07 | 64 |
neural plate | 5.50e-07 | 64 |
presumptive neural plate | 5.50e-07 | 64 |
regional part of brain | 9.82e-07 | 46 |