Personal tools

FFCP PHASE1:Mm9::chr1:192735682..192735689,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320119
|EntrezGene=320119
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BLK9,E9QMX4,E9QL88,E9Q1Q6
|UniProt=Q8BLK9,E9QMX4,E9QL88,E9Q1Q6
|association_with_transcript=-33bp_to_ENSMUST00000056178,ENSMUST00000061611,ENSMUST00000097440,ENSMUST00000166488,NM_178775,uc007ebh.2,uc007ebi.2_5end
|association_with_transcript=-33bp_to_ENSMUST00000056178,ENSMUST00000061611,ENSMUST00000097440,ENSMUST00000166488,NM_178775,uc007ebh.2,uc007ebi.2_5end
|cluster_id=chr1:192735682..192735689,-
|description=CAGE_peak_2_at_Rps6kc1_5end
|description=CAGE_peak_2_at_Rps6kc1_5end
|id=chr1:192735682..192735689,-
|id=chr1:192735682..192735689,-
|ontology_enrichment_celltype=CL:0000117!9.36e-09!23;CL:0000337!9.36e-09!23
|ontology_enrichment_celltype=CL:0000117!9.36e-09!23;CL:0000337!9.36e-09!23
|ontology_enrichment_celltype_v019_2=CL:0002611,1.16e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.04e-14!52;UBERON:0005068!4.04e-14!52;UBERON:0006241!4.04e-14!52;UBERON:0007135!4.04e-14!52;UBERON:0002346!1.53e-13!71;UBERON:0003075!1.53e-13!71;UBERON:0007284!1.53e-13!71;UBERON:0001017!3.32e-13!73;UBERON:0005743!3.32e-13!73;UBERON:0003056!4.39e-13!49;UBERON:0000073!5.08e-13!75;UBERON:0001016!5.08e-13!75;UBERON:0000033!5.69e-13!63;UBERON:0002020!4.82e-12!34;UBERON:0000955!6.95e-12!50;UBERON:0006238!6.95e-12!50;UBERON:0003080!1.52e-11!40;UBERON:0002616!2.63e-11!49;UBERON:0002780!4.84e-11!39;UBERON:0001890!4.84e-11!39;UBERON:0006240!4.84e-11!39;UBERON:0004121!6.68e-11!102;UBERON:0000924!6.68e-11!102;UBERON:0006601!6.68e-11!102;UBERON:0002791!9.39e-10!29;UBERON:0003528!9.39e-10!29;UBERON:0001893!9.39e-10!29;UBERON:0000956!3.30e-08!21;UBERON:0001869!3.30e-08!21;UBERON:0000203!3.30e-08!21;UBERON:0007811!3.63e-07!86;UBERON:0000025!4.29e-07!114;UBERON:0002619!9.02e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.67e-14,34;UBERON:0002346,4.30e-13,64;UBERON:0003075,4.30e-13,64;UBERON:0007284,4.30e-13,64;UBERON:0002619,1.53e-11,17;UBERON:0001049,2.73e-11,52;UBERON:0005068,2.73e-11,52;UBERON:0006241,2.73e-11,52;UBERON:0007135,2.73e-11,52;UBERON:0010371,5.04e-11,73;UBERON:0000073,9.28e-11,54;UBERON:0003056,1.51e-10,49;UBERON:0004121,5.51e-10,95;UBERON:0000924,5.51e-10,95;UBERON:0006601,5.51e-10,95;UBERON:0001017,1.04e-09,73;UBERON:0003528,1.05e-09,29;UBERON:0002791,1.05e-09,29;UBERON:0001893,1.05e-09,29;UBERON:0000955,2.28e-09,47;UBERON:0006238,2.28e-09,47;UBERON:0001016,2.34e-09,75;UBERON:0000956,4.20e-09,21;UBERON:0001869,4.20e-09,21;UBERON:0000203,4.20e-09,21;UBERON:0002021,2.00e-08,10;UBERON:0000411,2.00e-08,10;UBERON:0001950,2.00e-08,10;UBERON:0002780,2.29e-08,39;UBERON:0001890,2.29e-08,39;UBERON:0006240,2.29e-08,39;UBERON:0003080,4.18e-08,40;UBERON:0002616,4.33e-08,46;UBERON:0010314,5.45e-08,92;UBERON:0002256,1.16e-07,2
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,1.00179145989269,0,0,0.129123323441576,0,0,0,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0.498703936075477,1.22501613757421,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0.725362142011344,0,0,0,0,0.606949382578793,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.933206510776299,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,1.10241719293459,0.862609239164127,1.83843757322004,0,0.383062014255563,0.614426133024974,1.18697658957174,0.914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.585561594023094,0.628340120440365,1.27728527604296,0,0,0,0.898743836428936,0,1.25654352112864,0.695297280769106,0.767146371990992,0.41557608911912,0.973447578406546,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,1.56483948048054,1.0249097622788,0.655912071918102,1.55222022443409,0,0.189106080167819,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0.828503090142008,0,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0,0.817357396570186,0.16455984991348,0.656669856316381,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,0.514523061896422,0.660837565967596,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,1.29682829924817,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.350679099451593,0.316182685621286,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0,0.345369963731791,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.28528526568723,0.567760340833074,0.35613120733451,0.488660878060728,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0.646793418913773,0.857348140126369,0,0.891844088010353,0.822745103010605,2.13125464380219,0,0,0,0,0.161464426695906,0,0.238744688006273,0.328281799490123,0.291480836629851,0.556275906031529,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0,0,0.495920734352016,0,0.388844919875379,0,0,0.149516546043979,0.66183396182839,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,0.724752362478018,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,1.6942555278512,0.920650473014354,1.71868654031819,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0,0,0,0,0.37456602987953,0.256100609619477,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0.342869252385415,0.177475806159338,0,0.290692833264657,0.564656282491984,0.169229215783353,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0,0.771626443924566,0.999242311751784,0.701794825336225,1.07435527024149,0,0.441182838239031,0
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,1.00179145989269,0,0,0.129123323441576,0,0,0,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0.498703936075477,1.22501613757421,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0.725362142011344,0,0,0,0,0.606949382578793,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.933206510776299,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,1.10241719293459,0.862609239164127,1.83843757322004,0,0.383062014255563,0.614426133024974,1.18697658957174,0.914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,1.1183966749518,0.151452386666368,0.302286240427142,0,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.585561594023094,0.628340120440365,1.27728527604296,0,0,0,0.898743836428936,0,1.25654352112864,0.695297280769106,0.767146371990992,0.41557608911912,0.973447578406546,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,1.56483948048054,1.0249097622788,0.655912071918102,1.55222022443409,0,0.189106080167819,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0.828503090142008,0,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0,0.817357396570186,0.16455984991348,0.656669856316381,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,0.514523061896422,0.660837565967596,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,1.29682829924817,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.350679099451593,0.316182685621286,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0,0.345369963731791,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.28528526568723,0.567760340833074,0.35613120733451,0.488660878060728,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0.646793418913773,0.857348140126369,0,0.891844088010353,0.822745103010605,2.13125464380219,0,0,0,0,0.161464426695906,0,0.238744688006273,0.328281799490123,0.291480836629851,0.556275906031529,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0,0,0.495920734352016,0,0.388844919875379,0,0,0.149516546043979,0.66183396182839,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,0.724752362478018,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,1.6942555278512,0.920650473014354,1.71868654031819,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0,0,0,0,0.37456602987953,0.256100609619477,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0.342869252385415,0.177475806159338,0,0.290692833264657,0.564656282491984,0.169229215783353,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0,0.771626443924566,0.999242311751784,0.701794825336225,1.07435527024149,0,0.441182838239031,0
|short_description=p2@Rps6kc1
|short_description=p2@Rps6kc1
}}
}}

Latest revision as of 23:55, 26 September 2015

Short description:p2@Rps6kc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rps6kc1_5end
Coexpression cluster:NA
Association with transcript: -33bp_to_ENSMUST00000056178, ENSMUST00000061611, ENSMUST00000097440, ENSMUST00000166488, NM_178775, uc007ebh.2, uc007ebi.2_5end
EntrezGene:Rps6kc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rps6kc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the dorsal spinal cord1.16e-072

Uber anatomy
Ontology termp-valuen
gray matter6.67e-1434
neurectoderm4.30e-1364
neural plate4.30e-1364
presumptive neural plate4.30e-1364
regional part of cerebral cortex1.53e-1117
neural tube2.73e-1152
neural rod2.73e-1152
future spinal cord2.73e-1152
neural keel2.73e-1152
ecto-epithelium5.04e-1173
regional part of nervous system9.28e-1154
pre-chordal neural plate1.51e-1049
ectoderm-derived structure5.51e-1095
ectoderm5.51e-1095
presumptive ectoderm5.51e-1095
central nervous system1.04e-0973
brain grey matter1.05e-0929
regional part of telencephalon1.05e-0929
telencephalon1.05e-0929
brain2.28e-0947
future brain2.28e-0947
nervous system2.34e-0975
cerebral cortex4.20e-0921
cerebral hemisphere4.20e-0921
pallium4.20e-0921
occipital lobe2.00e-0810
visual cortex2.00e-0810
neocortex2.00e-0810
regional part of forebrain2.29e-0839
forebrain2.29e-0839
future forebrain2.29e-0839
anterior neural tube4.18e-0840
regional part of brain4.33e-0846
structure with developmental contribution from neural crest5.45e-0892
dorsal horn of spinal cord1.16e-072
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:192735682..192735689,-&oldid=4281365"