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FFCP PHASE1:Mm9::chr4:42930106..42930205,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230085
|EntrezGene=230085
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80TL4,A2AG27
|UniProt=Q80TL4,A2AG27
|association_with_transcript=0bp_to_ENSMUST00000069184,ENSMUST00000107976,ENSMUST00000124380,NM_172690,uc008soj.1,uc008sok.1_5end
|association_with_transcript=0bp_to_ENSMUST00000069184,ENSMUST00000107976,ENSMUST00000124380,NM_172690,uc008soj.1,uc008sok.1_5end
|cluster_id=chr4:42930106..42930205,+
|description=CAGE_peak_1_at_N28178_5end
|description=CAGE_peak_1_at_N28178_5end
|id=chr4:42930106..42930205,+
|id=chr4:42930106..42930205,+
|ontology_enrichment_celltype=CL:0000117!2.35e-13!23;CL:0000337!2.35e-13!23;CL:0000540!7.11e-10!33;CL:0000047!7.11e-10!33;CL:0000031!7.11e-10!33;CL:0000404!7.11e-10!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.36e-15,23;CL:0000337,6.36e-15,23;CL:0000540,2.58e-10,33;CL:0000047,2.58e-10,33;CL:0000031,2.58e-10,33;CL:0000404,2.58e-10,33;CL:0000393,5.85e-07,39;CL:0000211,5.85e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.50e-19!52;UBERON:0005068!3.50e-19!52;UBERON:0006241!3.50e-19!52;UBERON:0007135!3.50e-19!52;UBERON:0002346!1.18e-18!71;UBERON:0003075!1.18e-18!71;UBERON:0007284!1.18e-18!71;UBERON:0004121!1.53e-18!102;UBERON:0000924!1.53e-18!102;UBERON:0006601!1.53e-18!102;UBERON:0001017!1.77e-18!73;UBERON:0005743!1.77e-18!73;UBERON:0000073!2.20e-18!75;UBERON:0001016!2.20e-18!75;UBERON:0002020!5.19e-18!34;UBERON:0000955!5.72e-18!50;UBERON:0006238!5.72e-18!50;UBERON:0000033!8.13e-18!63;UBERON:0002616!1.99e-17!49;UBERON:0003056!4.70e-15!49;UBERON:0002791!4.80e-15!29;UBERON:0003528!4.80e-15!29;UBERON:0001893!4.80e-15!29;UBERON:0003080!1.70e-14!40;UBERON:0002780!6.59e-14!39;UBERON:0001890!6.59e-14!39;UBERON:0006240!6.59e-14!39;UBERON:0000956!1.35e-10!21;UBERON:0001869!1.35e-10!21;UBERON:0000203!1.35e-10!21;UBERON:0000468!3.80e-09!333;UBERON:0002619!1.27e-08!17;UBERON:0002021!2.26e-08!10;UBERON:0000411!2.26e-08!10;UBERON:0001950!2.26e-08!10;UBERON:0007811!2.32e-08!86;UBERON:0000153!3.87e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.73e-21,54;UBERON:0002020,2.65e-20,34;UBERON:0001049,1.86e-19,52;UBERON:0005068,1.86e-19,52;UBERON:0006241,1.86e-19,52;UBERON:0007135,1.86e-19,52;UBERON:0010314,6.80e-19,92;UBERON:0002346,1.33e-18,64;UBERON:0003075,1.33e-18,64;UBERON:0007284,1.33e-18,64;UBERON:0010371,4.67e-18,73;UBERON:0001017,5.67e-18,73;UBERON:0004121,1.39e-17,95;UBERON:0000924,1.39e-17,95;UBERON:0006601,1.39e-17,95;UBERON:0001016,1.93e-17,75;UBERON:0003528,6.13e-17,29;UBERON:0002791,6.13e-17,29;UBERON:0001893,6.13e-17,29;UBERON:0000955,4.07e-16,47;UBERON:0006238,4.07e-16,47;UBERON:0002616,1.54e-15,46;UBERON:0003056,2.59e-15,49;UBERON:0003080,6.66e-15,40;UBERON:0002780,2.98e-14,39;UBERON:0001890,2.98e-14,39;UBERON:0006240,2.98e-14,39;UBERON:0000956,6.84e-12,21;UBERON:0001869,6.84e-12,21;UBERON:0000203,6.84e-12,21;UBERON:0002619,1.17e-09,17;UBERON:0002021,2.81e-09,10;UBERON:0000411,2.81e-09,10;UBERON:0001950,2.81e-09,10
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,12.161190491603,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,37.6308617198852,32.797440714866,47.5373552629634,0,0,0,0,0,0.299600110518405,0.384218305321555,13.894408049336,17.8207838597832,14.9330722559481,55.7019419587417,50.3580273369679,22.7832886539815,21.3735400370667,39.5264078242309,52.8556228797066,63.8436690425939,53.1478605066602,27.5642341356105,28.7271200911566,32.8175423450759,61.6994427793052,40.518907922281,45.075483094159,57.4525741673652,48.6911148332932,44.9222664438974,0.984440513331393,1.81371744256285,0,0,0,0,0.649776417447669,0.448026887097336,2.80888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,1.37020655662872,1.55362730188303,2.52351636410202,0.693941307064543,1.52232739156071,1.84492397804847,1.50722640552623,2.93971767839262,0.251333182659351,0.494389935468748,0.578397427679647,0,0.323533699894818,0,0,0,9.07620470735796,8.16842156572475,0.766371165625774,0,0,0,55.8719084979989,82.8076091101714,57.1727302113533,92.9960113028679,95.126150126883,58.3884405212364,71.3861557498134,1.2220723662038,0.124406970610093,0,1.26265113531884,0.390361328888111,2.06911893990126,2.16074555766419,5.27466862425003,5.44291993210623,5.38077625196369,4.31027932974753,5.17406741478031,0,0.567318240503458,1.05570674498369,1.09597866213787,0.278047249225598,6.96504333044333,4.93877127379064,1.59227413454795,0,0,0,1.03562886267751,3.51789089971644,2.34080679899319,3.78791576936336,3.14822770795846,4.16521204795921,4.88321283975857,5.633741429392,4.55384835231961,6.91151369636618,2.95501435342371,2.67527071501324,3.50879969820798,2.19550115291051,1.61047702512446,59.0914755465198,27.8871499547861,0,0.528901133327089,1.91959425481711,1.39342003116263,1.67527699718721,1.4117846723634,0.444756087689741,1.52180500890047,0.474529061544512,0.988193728344065,1.00534083520108,2.98434708061726,1.75467678407208,1.79763881730844,1.51296634912286,0.597423819763102,0.758671603812327,0.228497025219458,2.25415471346161,1.62921062276251,1.16371492300575,0.771494018793504,0.189709611372772,0.147610147979602,0,0,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0,0,0,0,0,0,0,0.312037673114561,0,0,0,7.944387177164,1.13694847062291,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,0.788175720530955,0.664394068946325,0.478364305972461,2.94953966488328,5.18054945597687,8.53429445630918,0,0,0,0.275936746304732,50.0917840761911,48.8772733089487,0,0,0.631016438832513,0.390438744296638,1.93881057959519,0,1.33679204449436,0.283076530788832,1.61924280669958,1.46127928955656,1.18586333383957,36.3093087556642,1.41940085208269,3.02711526234334,0.651547837414304,3.13443233647817,0,0.971122544619926,0,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,1.26414703174326,0,1.03135543248187,0,0.540183282093931,0.517434735131018,0.857348140126369,0.354680467284547,3.0322698992352,5.92376474167636,4.87143918583359,0,0,1.10264199027481,4.28704257647848,3.39075296061402,4.04096597018644,3.58117032009409,1.31312719796049,0.291480836629851,58.0381195292895,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0,0,0,6.68269432610579,0.790839983952838,1.42323626988794,1.18805874903981,2.92723614420256,5.8957892211468,7.41753905116514,6.36431609085087,7.0674104335688,0.777689839750757,0,1.69107881605257,0,0.330916980914195,4.27792614356905,4.26227417476513,2.36538575687089,3.0512882047896,1.0416350787516,2.83120229949419,1.20792060413003,0.288030006257865,0.316011120628178,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.605798699688886,0.15241361331,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,3.62768613784338,0,0,0.167884616364078,2.70465431645067,0,0.73260649706906,0.214368379079066,0,150.788741978757,134.414969060096,140.359400792652,150.371534550727,130.850761276193,132.949325940587,134.329477546129,111.229337196382,135.942722695261,135.653201678977,0.518936737920883,2.79317411380722,3.92687293234509,5.10524105843418,5.8691685535835,7.72142735490059,6.00066165064361,8.85950746127245,9.30665707816264,6.31743029409494,9.12525479604863,7.1678009726709,6.83583004530142,7.93911889820379,7.75378830900779,6.19181798667996,8.22778714208474,7.33055037762079,6.59337441285291,5.5935589651071,5.82877729055206,3.72699192934609,5.24559617884106,6.54058874845478,7.0582035311498,6.59993941555077,10.0610385080025,5.78753365163254,7.4692262615224,6.17256498823512,8.42308628681636,8.76689893142515,8.18462086339379,6.04253680625267,7.52335782826451,17.7365510335942,9.35726433781634,7.30561583764214,6.12122662620299,4.41182838239031,1.62307484934295
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,12.161190491603,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,37.6308617198852,32.797440714866,47.5373552629634,0,0,0,0,0,0.299600110518405,0.384218305321555,13.894408049336,17.8207838597832,14.9330722559481,55.7019419587417,50.3580273369679,22.7832886539815,21.3735400370667,39.5264078242309,52.8556228797066,63.8436690425939,53.1478605066602,27.5642341356105,28.7271200911566,32.8175423450759,61.6994427793052,40.518907922281,45.075483094159,57.4525741673652,48.6911148332932,44.9222664438974,0.984440513331393,1.81371744256285,0,0,0,0,0.649776417447669,0.448026887097336,2.80888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,1.37020655662872,1.55362730188303,2.52351636410202,0.693941307064543,1.52232739156071,1.84492397804847,1.50722640552623,2.93971767839262,0.251333182659351,0.494389935468748,0.578397427679647,0,0.323533699894818,0,0,0,9.07620470735796,8.16842156572475,0.766371165625774,0,0,0,55.8719084979989,82.8076091101714,57.1727302113533,92.9960113028679,95.126150126883,58.3884405212364,71.3861557498134,1.2220723662038,0.124406970610093,0,1.26265113531884,0.390361328888111,2.06911893990126,2.16074555766419,5.27466862425003,5.44291993210623,5.38077625196369,4.31027932974753,5.17406741478031,0,0.567318240503458,1.05570674498369,1.09597866213787,0.278047249225598,6.96504333044333,4.93877127379064,1.59227413454795,0,0,0,1.03562886267751,3.51789089971644,2.34080679899319,3.78791576936336,3.14822770795846,4.16521204795921,4.88321283975857,5.633741429392,4.55384835231961,6.91151369636618,2.95501435342371,2.67527071501324,3.50879969820798,2.19550115291051,1.61047702512446,59.0914755465198,27.8871499547861,0,0.528901133327089,1.91959425481711,1.39342003116263,1.67527699718721,1.4117846723634,0.444756087689741,1.52180500890047,0.474529061544512,0.988193728344065,1.00534083520108,2.98434708061726,1.75467678407208,1.79763881730844,1.51296634912286,0.597423819763102,0.758671603812327,0.228497025219458,2.25415471346161,1.62921062276251,1.16371492300575,0.771494018793504,0.189709611372772,0.147610147979602,0,0,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0,0,0,0,0,0,0,0.312037673114561,0,0,0,7.944387177164,1.13694847062291,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,0.788175720530955,0.664394068946325,0.478364305972461,2.94953966488328,5.18054945597687,8.53429445630918,0,0,0,0.275936746304732,50.0917840761911,48.8772733089487,0,0,0.631016438832513,0.390438744296638,1.93881057959519,0,1.33679204449436,0.283076530788832,1.61924280669958,1.46127928955656,1.18586333383957,36.3093087556642,1.41940085208269,3.02711526234334,0.651547837414304,3.13443233647817,0,0.971122544619926,0,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,1.26414703174326,0,1.03135543248187,0,0.540183282093931,0.517434735131018,0.857348140126369,0.354680467284547,3.0322698992352,5.92376474167636,4.87143918583359,0,0,1.10264199027481,4.28704257647848,3.39075296061402,4.04096597018644,3.58117032009409,1.31312719796049,0.291480836629851,58.0381195292895,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0,0,0,6.68269432610579,0.790839983952838,1.42323626988794,1.18805874903981,2.92723614420256,5.8957892211468,7.41753905116514,6.36431609085087,7.0674104335688,0.777689839750757,0,1.69107881605257,0,0.330916980914195,4.27792614356905,4.26227417476513,2.36538575687089,3.0512882047896,1.0416350787516,2.83120229949419,1.20792060413003,0.288030006257865,0.316011120628178,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0.295379054349154,0.605798699688886,0.15241361331,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,3.62768613784338,0,0,0.167884616364078,2.70465431645067,0,0.73260649706906,0.214368379079066,0,150.788741978757,134.414969060096,140.359400792652,150.371534550727,130.850761276193,132.949325940587,134.329477546129,111.229337196382,135.942722695261,135.653201678977,0.518936737920883,2.79317411380722,3.92687293234509,5.10524105843418,5.8691685535835,7.72142735490059,6.00066165064361,8.85950746127245,9.30665707816264,6.31743029409494,9.12525479604863,7.1678009726709,6.83583004530142,7.93911889820379,7.75378830900779,6.19181798667996,8.22778714208474,7.33055037762079,6.59337441285291,5.5935589651071,5.82877729055206,3.72699192934609,5.24559617884106,6.54058874845478,7.0582035311498,6.59993941555077,10.0610385080025,5.78753365163254,7.4692262615224,6.17256498823512,8.42308628681636,8.76689893142515,8.18462086339379,6.04253680625267,7.52335782826451,17.7365510335942,9.35726433781634,7.30561583764214,6.12122662620299,4.41182838239031,1.62307484934295
|short_description=p1@N28178
|short_description=p1@N28178
}}
}}

Latest revision as of 23:45, 26 September 2015

Short description:p1@N28178
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_N28178_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000069184, ENSMUST00000107976, ENSMUST00000124380, NM_172690, uc008soj.1, uc008sok.1_5end
EntrezGene:N28178
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@N28178

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C337.63
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C747.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F155.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D550.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D639.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D352.86
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F363.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D753.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E461.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E540.52
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D657.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F648.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E144.92
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A455.87
corpus striatum, adult.CNhs10487.19-21D882.81
corpus striatum, neonate N00.CNhs11226.630-43F157.17
cortex, adult.CNhs10473.12-14D593.00
cortex, neonate N30.CNhs11107.1392-42F295.13
diencephalon, adult.CNhs10482.20-12F258.39
diencephalon, neonate N30.CNhs11201.1388-42B271.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E859.09
hippocampus, neonate N00.CNhs11228.627-43G127.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C250.09
medulla oblongata, neonate N30.CNhs11200.1396-42A348.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I936.31
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C958.04
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1150.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2134.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3140.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7150.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4130.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5132.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6134.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7111.23
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8135.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9135.65
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.36e-1523
neuroblast (sensu Vertebrata)6.36e-1523
neuron2.58e-1033
neuronal stem cell2.58e-1033
neuroblast2.58e-1033
electrically signaling cell2.58e-1033
electrically responsive cell5.85e-0739
electrically active cell5.85e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.73e-2154
gray matter2.65e-2034
neural tube1.86e-1952
neural rod1.86e-1952
future spinal cord1.86e-1952
neural keel1.86e-1952
structure with developmental contribution from neural crest6.80e-1992
neurectoderm1.33e-1864
neural plate1.33e-1864
presumptive neural plate1.33e-1864
ecto-epithelium4.67e-1873
central nervous system5.67e-1873
ectoderm-derived structure1.39e-1795
ectoderm1.39e-1795
presumptive ectoderm1.39e-1795
nervous system1.93e-1775
brain grey matter6.13e-1729
regional part of telencephalon6.13e-1729
telencephalon6.13e-1729
brain4.07e-1647
future brain4.07e-1647
regional part of brain1.54e-1546
pre-chordal neural plate2.59e-1549
anterior neural tube6.66e-1540
regional part of forebrain2.98e-1439
forebrain2.98e-1439
future forebrain2.98e-1439
cerebral cortex6.84e-1221
cerebral hemisphere6.84e-1221
pallium6.84e-1221
regional part of cerebral cortex1.17e-0917
occipital lobe2.81e-0910
visual cortex2.81e-0910
neocortex2.81e-0910
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