FFCP PHASE1:Mm9::chr4:41516535..41516584,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:41516535..41516584,-
|short_description=p1@2310028H24Rik
|description=CAGE_peak_1_at_2310028H24Rik_5end
|association_with_transcript=0bp_to_ENSMUST00000108...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71901 | |EntrezGene=71901 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2ANP3,A2ANP2,A2ANP1,Q9D772,B7ZWP1 | |UniProt=A2ANP3,A2ANP2,A2ANP1,Q9D772,B7ZWP1 | ||
|association_with_transcript=0bp_to_ENSMUST00000108049,ENSMUST00000108050,ENSMUST00000108052,ENSMUST00000146276,NM_001159583,NM_027993,uc008siz.2,uc008sja.1,uc012dcc.1_5end | |||
|cluster_id=chr4:41516535..41516584,- | |||
|description=CAGE_peak_1_at_2310028H24Rik_5end | |||
|id=chr4:41516535..41516584,- | |||
|ontology_enrichment_celltype=CL:0002319!7.85e-19!43;CL:0000221!1.69e-18!44;CL:0000133!1.69e-18!44;CL:0000055!4.56e-18!50;CL:0000540!2.22e-15!33;CL:0000047!2.22e-15!33;CL:0000031!2.22e-15!33;CL:0000404!2.22e-15!33;CL:0000393!1.73e-14!39;CL:0000211!1.73e-14!39;CL:0000117!2.67e-13!23;CL:0000337!2.67e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.84e-19,43;CL:0000221,1.68e-18,44;CL:0000133,1.68e-18,44;CL:0000540,2.22e-15,33;CL:0000047,2.22e-15,33;CL:0000031,2.22e-15,33;CL:0000404,2.22e-15,33;CL:0000393,1.73e-14,39;CL:0000211,1.73e-14,39;CL:0000117,2.67e-13,23;CL:0000337,2.67e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.00e-34!75;UBERON:0001016!7.00e-34!75;UBERON:0001017!1.63e-33!73;UBERON:0005743!1.63e-33!73;UBERON:0004121!1.92e-33!102;UBERON:0000924!1.92e-33!102;UBERON:0006601!1.92e-33!102;UBERON:0002346!4.26e-25!71;UBERON:0003075!4.26e-25!71;UBERON:0007284!4.26e-25!71;UBERON:0001049!7.64e-24!52;UBERON:0005068!7.64e-24!52;UBERON:0006241!7.64e-24!52;UBERON:0007135!7.64e-24!52;UBERON:0000955!6.62e-23!50;UBERON:0006238!6.62e-23!50;UBERON:0000033!7.44e-23!63;UBERON:0002616!2.47e-22!49;UBERON:0002020!3.40e-19!34;UBERON:0003056!1.04e-17!49;UBERON:0003080!8.37e-17!40;UBERON:0002791!2.44e-16!29;UBERON:0003528!2.44e-16!29;UBERON:0001893!2.44e-16!29;UBERON:0002780!3.63e-16!39;UBERON:0001890!3.63e-16!39;UBERON:0006240!3.63e-16!39;UBERON:0000956!8.40e-12!21;UBERON:0001869!8.40e-12!21;UBERON:0000203!8.40e-12!21;UBERON:0000025!1.64e-10!114;UBERON:0002619!2.96e-10!17;UBERON:0004111!4.15e-10!122;UBERON:0007811!1.19e-09!86;UBERON:0003076!1.00e-07!12;UBERON:0003057!1.00e-07!12;UBERON:0000153!1.47e-07!94;UBERON:0002021!1.63e-07!10;UBERON:0000411!1.63e-07!10;UBERON:0001950!1.63e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.99e-34,75;UBERON:0004121,1.14e-33,95;UBERON:0000924,1.14e-33,95;UBERON:0006601,1.14e-33,95;UBERON:0001017,1.63e-33,73;UBERON:0002346,8.91e-26,64;UBERON:0003075,8.91e-26,64;UBERON:0007284,8.91e-26,64;UBERON:0000073,2.13e-25,54;UBERON:0010371,2.75e-24,73;UBERON:0001049,7.63e-24,52;UBERON:0005068,7.63e-24,52;UBERON:0006241,7.63e-24,52;UBERON:0007135,7.63e-24,52;UBERON:0000955,1.15e-20,47;UBERON:0006238,1.15e-20,47;UBERON:0010314,2.93e-20,92;UBERON:0002616,4.17e-20,46;UBERON:0002020,3.40e-19,34;UBERON:0003056,1.04e-17,49;UBERON:0003080,8.37e-17,40;UBERON:0003528,2.44e-16,29;UBERON:0002791,2.44e-16,29;UBERON:0001893,2.44e-16,29;UBERON:0002780,3.62e-16,39;UBERON:0001890,3.62e-16,39;UBERON:0006240,3.62e-16,39;UBERON:0000956,8.40e-12,21;UBERON:0001869,8.40e-12,21;UBERON:0000203,8.40e-12,21;UBERON:0000025,1.64e-10,114;UBERON:0002619,2.96e-10,17;UBERON:0004111,4.15e-10,122;UBERON:0003076,1.00e-07,12;UBERON:0003057,1.00e-07,12;UBERON:0002021,1.63e-07,10;UBERON:0000411,1.63e-07,10;UBERON:0001950,1.63e-07,10 | |||
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| ||
|short_description=p1@2310028H24Rik | |||
}} | }} |
Latest revision as of 23:33, 26 September 2015
Short description: | p1@2310028H24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310028H24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000108049, ENSMUST00000108050, ENSMUST00000108052, ENSMUST00000146276, NM_001159583, NM_027993, uc008siz.2, uc008sja.1, uc012dcc.1_5end |
EntrezGene: | 2310028H24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.84e-19 | 43 |
ectodermal cell | 1.68e-18 | 44 |
neurectodermal cell | 1.68e-18 | 44 |
neuron | 2.22e-15 | 33 |
neuronal stem cell | 2.22e-15 | 33 |
neuroblast | 2.22e-15 | 33 |
electrically signaling cell | 2.22e-15 | 33 |
electrically responsive cell | 1.73e-14 | 39 |
electrically active cell | 1.73e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.67e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.67e-13 | 23 |