FFCP PHASE1:Mm9::chr12:88541150..88541234,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:88541150..88541234,-
|short_description=p1@Tmed8
|description=CAGE_peak_1_at_Tmed8_5end
|association_with_transcript=0bp_to_ENSMUST00000037418,NM_00103347...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382620 | |EntrezGene=382620 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1073 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHI4 | |UniProt=Q3UHI4 | ||
|association_with_transcript=0bp_to_ENSMUST00000037418,NM_001033475,uc007oin.1_5end | |||
|cluster_id=chr12:88541150..88541234,- | |||
|description=CAGE_peak_1_at_Tmed8_5end | |||
|id=chr12:88541150..88541234,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.22e-13!86;UBERON:0000153!3.15e-12!94;UBERON:0001017!4.80e-12!73;UBERON:0005743!4.80e-12!73;UBERON:0000073!1.23e-11!75;UBERON:0001016!1.23e-11!75;UBERON:0002346!2.58e-11!71;UBERON:0003075!2.58e-11!71;UBERON:0007284!2.58e-11!71;UBERON:0004121!1.36e-10!102;UBERON:0000924!1.36e-10!102;UBERON:0006601!1.36e-10!102;UBERON:0001049!6.00e-10!52;UBERON:0005068!6.00e-10!52;UBERON:0006241!6.00e-10!52;UBERON:0007135!6.00e-10!52;UBERON:0000955!1.05e-09!50;UBERON:0006238!1.05e-09!50;UBERON:0002616!2.99e-09!49;UBERON:0000033!9.55e-09!63;UBERON:0000475!1.45e-08!200;UBERON:0003080!4.51e-07!40;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.80e-12,73;UBERON:0001016,1.23e-11,75;UBERON:0000073,4.28e-11,54;UBERON:0001049,6.00e-10,52;UBERON:0005068,6.00e-10,52;UBERON:0006241,6.00e-10,52;UBERON:0007135,6.00e-10,52;UBERON:0002346,6.21e-10,64;UBERON:0003075,6.21e-10,64;UBERON:0007284,6.21e-10,64;UBERON:0004121,3.26e-09,95;UBERON:0000924,3.26e-09,95;UBERON:0006601,3.26e-09,95;UBERON:0010371,6.19e-09,73;UBERON:0000955,2.61e-08,47;UBERON:0006238,2.61e-08,47;UBERON:0002616,7.04e-08,46;UBERON:0010314,9.29e-08,92;UBERON:0003080,4.51e-07,40;UBERON:0002021,8.77e-07,10;UBERON:0000411,8.77e-07,10;UBERON:0001950,8.77e-07,10 | |||
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| ||
|short_description=p1@Tmed8 | |||
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Latest revision as of 23:32, 26 September 2015
Short description: | p1@Tmed8 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmed8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1073 |
Association with transcript: | 0bp_to_ENSMUST00000037418, NM_001033475, uc007oin.1_5end |
EntrezGene: | Tmed8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.80e-12 | 73 |
nervous system | 1.23e-11 | 75 |
regional part of nervous system | 4.28e-11 | 54 |
neural tube | 6.00e-10 | 52 |
neural rod | 6.00e-10 | 52 |
future spinal cord | 6.00e-10 | 52 |
neural keel | 6.00e-10 | 52 |
neurectoderm | 6.21e-10 | 64 |
neural plate | 6.21e-10 | 64 |
presumptive neural plate | 6.21e-10 | 64 |
ectoderm-derived structure | 3.26e-09 | 95 |
ectoderm | 3.26e-09 | 95 |
presumptive ectoderm | 3.26e-09 | 95 |
ecto-epithelium | 6.19e-09 | 73 |
brain | 2.61e-08 | 47 |
future brain | 2.61e-08 | 47 |
regional part of brain | 7.04e-08 | 46 |
structure with developmental contribution from neural crest | 9.29e-08 | 92 |
anterior neural tube | 4.51e-07 | 40 |
occipital lobe | 8.77e-07 | 10 |
visual cortex | 8.77e-07 | 10 |
neocortex | 8.77e-07 | 10 |