Personal tools

FFCP PHASE1:Mm9::chr2:74583741..74583750,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15434
|EntrezGene=15434
|HGNC=
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=G3UZS5
|UniProt=G3UZS5
|association_with_transcript=10bp_to_ENSMUST00000140666_5end
|association_with_transcript=10bp_to_ENSMUST00000140666_5end
|cluster_id=chr2:74583741..74583750,+
|description=CAGE_peak_10_at_Hoxd3_5end
|description=CAGE_peak_10_at_Hoxd3_5end
|id=chr2:74583741..74583750,+
|id=chr2:74583741..74583750,+
|ontology_enrichment_celltype=CL:0000107!6.12e-07!9
|ontology_enrichment_celltype=CL:0000107!6.12e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,1.46e-32,9;CL:0002679,6.33e-09,1;CL:0000540,8.71e-09,33;CL:0000047,8.71e-09,33;CL:0000031,8.71e-09,33;CL:0000404,8.71e-09,33;CL:0000393,2.14e-07,39;CL:0000211,2.14e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002113!3.51e-11!14;UBERON:0003918!3.51e-11!14;UBERON:0005095!3.51e-11!14;UBERON:0007687!3.51e-11!14;UBERON:0006554!1.95e-09!16;UBERON:0000489!4.07e-09!21;UBERON:0001008!1.01e-08!17;UBERON:0002410!6.12e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.46e-32,9;UBERON:0000010,1.21e-26,11;UBERON:0000013,1.76e-25,3;UBERON:0010313,6.49e-25,3;UBERON:0002342,6.49e-25,3;UBERON:0002005,6.49e-25,3;UBERON:0005428,6.49e-25,3;UBERON:0005062,6.49e-25,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,1.06644125267617,2.09013004674395,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.505892296994058,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,5.99465616890888,5.46614242015294,5.38558494331997,0,0,0,5.66734982344852,9.05993159525067,9.09161889277004,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.627264888043406,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.754505365544305,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,1.06644125267617,2.09013004674395,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.505892296994058,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,5.99465616890888,5.46614242015294,5.38558494331997,0,0,0,5.66734982344852,9.05993159525067,9.09161889277004,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.627264888043406,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.754505365544305,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0,0
|short_description=p10@Hoxd3
|short_description=p10@Hoxd3
}}
}}

Latest revision as of 23:31, 26 September 2015

Short description:p10@Hoxd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Hoxd3_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: 10bp_to_ENSMUST00000140666_5end
EntrezGene:Hoxd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:74583741..74583750,%2B&oldid=4280402"