FFCP PHASE1:Mm9::chr12:88225758..88225792,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:88225758..88225792,- to FFCP PHASE1:Mm9::chr12:88225758..88225792,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=238330 | |EntrezGene=238330 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8K3X4 | |UniProt=Q8K3X4 | ||
|association_with_transcript=0bp_to_ENSMUST00000038422,NM_145836,uc007oia.2_5end | |||
|cluster_id=chr12:88225758..88225792,- | |||
|description=CAGE_peak_2_at_6430527G18Rik_5end | |||
|id=chr12:88225758..88225792,- | |||
|ontology_enrichment_celltype=CL:0000540!2.81e-10!33;CL:0000047!2.81e-10!33;CL:0000031!2.81e-10!33;CL:0000404!2.81e-10!33;CL:0000221!2.32e-09!44;CL:0000133!2.32e-09!44;CL:0002319!2.53e-09!43;CL:0000117!5.03e-08!23;CL:0000337!5.03e-08!23;CL:0000393!2.06e-07!39;CL:0000211!2.06e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.80e-10,33;CL:0000047,2.80e-10,33;CL:0000031,2.80e-10,33;CL:0000404,2.80e-10,33;CL:0000221,2.32e-09,44;CL:0000133,2.32e-09,44;CL:0002319,2.52e-09,43;CL:0000117,5.02e-08,23;CL:0000337,5.02e-08,23;CL:0000393,2.05e-07,39;CL:0000211,2.05e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.72e-18!102;UBERON:0000924!4.72e-18!102;UBERON:0006601!4.72e-18!102;UBERON:0001017!1.26e-15!73;UBERON:0005743!1.26e-15!73;UBERON:0000073!3.28e-15!75;UBERON:0001016!3.28e-15!75;UBERON:0002346!4.05e-12!71;UBERON:0003075!4.05e-12!71;UBERON:0007284!4.05e-12!71;UBERON:0001049!9.27e-11!52;UBERON:0005068!9.27e-11!52;UBERON:0006241!9.27e-11!52;UBERON:0007135!9.27e-11!52;UBERON:0000033!2.47e-10!63;UBERON:0000955!1.00e-09!50;UBERON:0006238!1.00e-09!50;UBERON:0002616!3.04e-09!49;UBERON:0003080!1.18e-08!40;UBERON:0002780!1.73e-08!39;UBERON:0001890!1.73e-08!39;UBERON:0006240!1.73e-08!39;UBERON:0003056!2.38e-08!49;UBERON:0002020!3.23e-08!34;UBERON:0004111!3.30e-07!122;UBERON:0000468!6.28e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.10e-16,95;UBERON:0000924,2.10e-16,95;UBERON:0006601,2.10e-16,95;UBERON:0001017,1.25e-15,73;UBERON:0001016,3.26e-15,75;UBERON:0010314,1.17e-13,92;UBERON:0010371,3.21e-11,73;UBERON:0000073,4.99e-11,54;UBERON:0001049,9.24e-11,52;UBERON:0005068,9.24e-11,52;UBERON:0006241,9.24e-11,52;UBERON:0007135,9.24e-11,52;UBERON:0002346,9.63e-11,64;UBERON:0003075,9.63e-11,64;UBERON:0007284,9.63e-11,64;UBERON:0000955,7.36e-10,47;UBERON:0006238,7.36e-10,47;UBERON:0002616,2.28e-09,46;UBERON:0003080,1.18e-08,40;UBERON:0002780,1.72e-08,39;UBERON:0001890,1.72e-08,39;UBERON:0006240,1.72e-08,39;UBERON:0003056,2.38e-08,49;UBERON:0002020,3.22e-08,34;UBERON:0004111,3.41e-07,122 | |||
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| ||
|short_description=p2@6430527G18Rik | |||
}} | }} |
Latest revision as of 23:20, 26 September 2015
Short description: | p2@6430527G18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6430527G18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000038422, NM_145836, uc007oia.2_5end |
EntrezGene: | 6430527G18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.80e-10 | 33 |
neuronal stem cell | 2.80e-10 | 33 |
neuroblast | 2.80e-10 | 33 |
electrically signaling cell | 2.80e-10 | 33 |
ectodermal cell | 2.32e-09 | 44 |
neurectodermal cell | 2.32e-09 | 44 |
neural cell | 2.52e-09 | 43 |
CNS neuron (sensu Vertebrata) | 5.02e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.02e-08 | 23 |
electrically responsive cell | 2.05e-07 | 39 |
electrically active cell | 2.05e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.10e-16 | 95 |
ectoderm | 2.10e-16 | 95 |
presumptive ectoderm | 2.10e-16 | 95 |
central nervous system | 1.25e-15 | 73 |
nervous system | 3.26e-15 | 75 |
structure with developmental contribution from neural crest | 1.17e-13 | 92 |
ecto-epithelium | 3.21e-11 | 73 |
regional part of nervous system | 4.99e-11 | 54 |
neural tube | 9.24e-11 | 52 |
neural rod | 9.24e-11 | 52 |
future spinal cord | 9.24e-11 | 52 |
neural keel | 9.24e-11 | 52 |
neurectoderm | 9.63e-11 | 64 |
neural plate | 9.63e-11 | 64 |
presumptive neural plate | 9.63e-11 | 64 |
brain | 7.36e-10 | 47 |
future brain | 7.36e-10 | 47 |
regional part of brain | 2.28e-09 | 46 |
anterior neural tube | 1.18e-08 | 40 |
regional part of forebrain | 1.72e-08 | 39 |
forebrain | 1.72e-08 | 39 |
future forebrain | 1.72e-08 | 39 |
pre-chordal neural plate | 2.38e-08 | 49 |
gray matter | 3.22e-08 | 34 |
anatomical conduit | 3.41e-07 | 122 |