FFCP PHASE1:Mm9::chr12:88225666..88225700,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238330 | |EntrezGene=238330 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8K3X4 | |UniProt=Q8K3X4 | ||
|association_with_transcript=63bp_to_ENSMUST00000038422,NM_145836,uc007oia.2_5end | |association_with_transcript=63bp_to_ENSMUST00000038422,NM_145836,uc007oia.2_5end | ||
|cluster_id=chr12:88225666..88225700,- | |||
|description=CAGE_peak_3_at_6430527G18Rik_5end | |description=CAGE_peak_3_at_6430527G18Rik_5end | ||
|id=chr12:88225666..88225700,- | |id=chr12:88225666..88225700,- | ||
|ontology_enrichment_celltype=CL:0000055!4.66e-11!50;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0002319!2.32e-10!43;CL:0002321!8.08e-09!70;CL:0000220!8.08e-09!70;CL:0000393!6.62e-08!39;CL:0000211!6.62e-08!39;CL:0000540!5.47e-07!33;CL:0000047!5.47e-07!33;CL:0000031!5.47e-07!33;CL:0000404!5.47e-07!33 | |ontology_enrichment_celltype=CL:0000055!4.66e-11!50;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0002319!2.32e-10!43;CL:0002321!8.08e-09!70;CL:0000220!8.08e-09!70;CL:0000393!6.62e-08!39;CL:0000211!6.62e-08!39;CL:0000540!5.47e-07!33;CL:0000047!5.47e-07!33;CL:0000031!5.47e-07!33;CL:0000404!5.47e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.81e-10,44;CL:0000133,1.81e-10,44;CL:0002319,2.18e-10,43;CL:0002321,7.74e-09,70;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39;CL:0000540,5.26e-07,33;CL:0000047,5.26e-07,33;CL:0000031,5.26e-07,33;CL:0000404,5.26e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.72e-14!102;UBERON:0000924!3.72e-14!102;UBERON:0006601!3.72e-14!102;UBERON:0000073!1.06e-11!75;UBERON:0001016!1.06e-11!75;UBERON:0001017!9.50e-11!73;UBERON:0005743!9.50e-11!73;UBERON:0000010!2.02e-07!11;UBERON:0003103!4.81e-07!43;UBERON:0002346!8.71e-07!71;UBERON:0003075!8.71e-07!71;UBERON:0007284!8.71e-07!71 | |ontology_enrichment_uberon=UBERON:0004121!3.72e-14!102;UBERON:0000924!3.72e-14!102;UBERON:0006601!3.72e-14!102;UBERON:0000073!1.06e-11!75;UBERON:0001016!1.06e-11!75;UBERON:0001017!9.50e-11!73;UBERON:0005743!9.50e-11!73;UBERON:0000010!2.02e-07!11;UBERON:0003103!4.81e-07!43;UBERON:0002346!8.71e-07!71;UBERON:0003075!8.71e-07!71;UBERON:0007284!8.71e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.73e-13,95;UBERON:0000924,8.73e-13,95;UBERON:0006601,8.73e-13,95;UBERON:0001016,1.21e-11,75;UBERON:0001017,1.08e-10,73;UBERON:0010314,3.00e-10,92;UBERON:0000010,1.94e-07,11;UBERON:0003103,4.62e-07,43 | |||
|phase1_expression=5.60520964866779,0.348975407639361,0.454999239389536,3.32710632437513,6.01074875935617,0.671517087647559,1.63528848416868,6.58528949552039,2.111830832275,4.68129052643987,0,0.319088635981346,3.93761678841773,4.37102012094987,0,0.404950534779652,0,1.10411757875383,0.822686601634433,0.84877930359606,3.40173160604279,1.48936426801328,1.56719873483361,1.11994695955385,0.22940928106717,0,0,0.646413698057667,0.570070258369122,1.51218077855958,0,0,1.23012957516914,0,1.1554064790051,0.664938581433969,0.612508068787107,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0,3.02152363141385,2.02753862439029,4.03802854755699,9.38869613217647,4.79655344036982,5.27246838562732,3.88859798148567,2.65974201088189,5.75010257459886,1.34226084846189,6.5282592781021,13.1076581665561,7.71778308107841,6.5902691185914,6.70373719960675,8.29497489524351,6.34789175126439,5.07065122804943,5.08266798103698,3.55717918444456,4.04954872776629,6.92206453796882,6.3943210345149,13.4820049733282,11.1423308543251,4.35496371695606,5.40023753326763,3.78584930432488,4.85606673486466,2.65042249141936,4.28717797252339,6.03826467414889,4.5960939330501,3.30347642998166,1.65993539510744,2.30409799884365,7.91317726381163,6.22115976496386,3.12548022334056,1.67509799400829,2.25105044012672,3.36156145108982,4.41942878210502,2.70506193518296,3.72798891650601,6.51245262665383,9.59758813356176,6.95674772884027,2.58127163094416,4.75979933595425,5.39703191637817,4.54843492213368,1.79210754838934,1.96622188184453,3.74946709671727,3.11743205523443,3.5333957451034,3.94361575374705,2.56652954828636,5.09610479413291,0,4.76280290224671,7.34743609877786,8.08839112023653,3.9964357901671,2.58937883647172,5.93768556259299,5.72501578328248,2.43572382649713,5.76538743140146,3.3158980921577,5.29149182110672,3.39299796590124,9.88779870937496,2.31358971071859,0,3.07357014900077,1.76673214768315,1.93950101254089,0,7.90508151931177,8.58731497935166,1.78819938646014,4.55297473122497,1.19980546198682,2.54140454146129,3.89455662452539,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,2.70124457927428,3.89379031362618,7.53611292492341,2.36373244159177,2.77995034277042,7.78634866779954,1.95180664444056,1.37941262660084,2.34080768746954,2.71268672104287,4.28629944653366,3.07472928683639,4.49768277886698,5.43277078551933,2.80238390812695,3.78212160335639,1.58356011747554,3.28793598641362,3.33656699070717,2.78601733217733,2.67516777330327,3.38358253591438,0,2.05878325691772,1.42081749697796,8.07790512888457,6.80125573945179,3.6012412292203,7.10234206755631,3.34499193970586,4.47374627373397,3.95307706075693,3.48755421819505,5.3712057488898,3.45575684818309,2.46251196118643,2.10778904819225,3.21639972335731,3.95190207523891,4.56301823785264,2.94405927989778,2.77842453424068,1.98251269790279,1.32225283331772,3.83918850963421,2.78684006232526,1.28867461322093,1.4117846723634,1.33426826306922,1.14135375667535,0,1.31759163779209,0.754005626400808,1.98956472041151,1.16978452271472,1.79763881730844,1.72910439899755,2.58883655230677,5.87970492954553,3.42745537829186,5.63538678365402,4.48032921259691,4.07300223052014,6.8031745293609,4.80597682144355,3.54264355151045,2.82597710114475,5.79966670432462,2.37162101669719,1.33476084572875,0.589676985339609,0.899448449539415,0.608580364165509,0.72353147925725,0.763877555344259,1.72617682470486,0.972811360650212,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.76805214562978,2.15276896226295,3.85954817090694,5.91210208533135,3.03186258832776,2.28150967018836,5.26209765903083,4.22442446919304,4.35516269348721,6.42717830392237,6.43941037930736,4.09851374676097,5.97954662051692,2.87018583583477,3.11340297959902,2.24490476425664,4.77341893318988,1.50791283939272,3.80733978673097,6.39293554924747,4.69092468718045,2.40825884981688,1.87538698547525,2.95082901678016,4.29200576247434,5.04813151066011,5.85658116444958,7.97066571611356,8.12493913038677,11.1399337041197,11.3230612315533,6.47697122679831,8.76767573733936,10.6727700045561,7.71171159412337,3.12268187458191,2.67098405500883,5.04949573996086,4.28922319728592,3.98235415019888,2.91336763385978,3.32555912661226,1.13163047853539,2.06711325016541,2.45948118355142,2.32585463851399,4.36240475373007,1.78248689192361,2.21225730555071,2.10837217149998,1.03135543248187,5.10659408630682,2.70091641046965,5.04498866752743,2.7863814554107,4.96552654198366,2.49716344642899,2.46823530903181,11.2652031172402,2.58138878870081,2.54198485036584,1.10264199027481,2.96795255294664,5.16686165426898,2.89502039655148,1.67121281604391,3.11867709515616,1.1659233465194,2.41052892613663,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,0.686334519619568,8.83887835968048,7.97723278244851,5.11339903076368,0.954670618015114,4.4287039101359,1.21991680276109,1.83609079397062,2.71814784818809,1.74690050996942,2.15782954215713,3.47144514046411,1.57053565190418,2.33306951925227,3.72803587852155,2.25477175473676,4.63501292736334,2.48187735685646,4.27792614356905,2.97067593998782,2.53434188236167,5.28107573905893,3.3853140059427,5.87212328783981,1.20792060413003,0,1.58005560314089,1.21635129174099,0.821687657318618,1.29920822977795,0.358053391334963,0.39736270956253,0.841368146639782,0.590758108698309,1.00966449948148,1.143102099825,0.403304740547362,0.584747284438515,0.577271049841977,0.935015217452552,3.40095575422817,0.887943813496259,1.52513556236109,2.18250001273302,5.9888774149979,5.2551093126331,5.67770035228522,6.00231461421384,3.51100472824754,4.51801474093653,5.06357760157895,4.58316410751517,3.78077001156113,2.05524755931193,3.7769694869485,4.72515750162264,0.900642406448441,4.07828168085784,4.14208249401456,3.21740777510948,4.78829848081237,3.75613932659095,2.67417388775123,4.82110274044359,2.02227859295016,3.11145418922261,3.5025959730612,2.88827288632634,3.28506375292937,2.5347929989024,1.32038438970253,1.87283014939765,1.98477972455095,2.06767688240208,3.33405583898152,1.62238056322798,3.27945674788299,2.88460130562315,3.23837624295674,2.05721551431249,1.4198064492747,3.33810665926249,2.61623549938191,2.35273451038327,1.69229215783353,0.182927972872773,1.8414879800649,2.44447404922551,0,1.66089025373844,2.06859412988683,4.91077251803627,1.39443157067369,3.47231899766054,6.74488560432454,2.57324769289949,3.43793686477277,5.35607329792761,1.32354851471709,1.85494268496337 | |phase1_expression=5.60520964866779,0.348975407639361,0.454999239389536,3.32710632437513,6.01074875935617,0.671517087647559,1.63528848416868,6.58528949552039,2.111830832275,4.68129052643987,0,0.319088635981346,3.93761678841773,4.37102012094987,0,0.404950534779652,0,1.10411757875383,0.822686601634433,0.84877930359606,3.40173160604279,1.48936426801328,1.56719873483361,1.11994695955385,0.22940928106717,0,0,0.646413698057667,0.570070258369122,1.51218077855958,0,0,1.23012957516914,0,1.1554064790051,0.664938581433969,0.612508068787107,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0,3.02152363141385,2.02753862439029,4.03802854755699,9.38869613217647,4.79655344036982,5.27246838562732,3.88859798148567,2.65974201088189,5.75010257459886,1.34226084846189,6.5282592781021,13.1076581665561,7.71778308107841,6.5902691185914,6.70373719960675,8.29497489524351,6.34789175126439,5.07065122804943,5.08266798103698,3.55717918444456,4.04954872776629,6.92206453796882,6.3943210345149,13.4820049733282,11.1423308543251,4.35496371695606,5.40023753326763,3.78584930432488,4.85606673486466,2.65042249141936,4.28717797252339,6.03826467414889,4.5960939330501,3.30347642998166,1.65993539510744,2.30409799884365,7.91317726381163,6.22115976496386,3.12548022334056,1.67509799400829,2.25105044012672,3.36156145108982,4.41942878210502,2.70506193518296,3.72798891650601,6.51245262665383,9.59758813356176,6.95674772884027,2.58127163094416,4.75979933595425,5.39703191637817,4.54843492213368,1.79210754838934,1.96622188184453,3.74946709671727,3.11743205523443,3.5333957451034,3.94361575374705,2.56652954828636,5.09610479413291,0,4.76280290224671,7.34743609877786,8.08839112023653,3.9964357901671,2.58937883647172,5.93768556259299,5.72501578328248,2.43572382649713,5.76538743140146,3.3158980921577,5.29149182110672,3.39299796590124,9.88779870937496,2.31358971071859,0,3.07357014900077,1.76673214768315,1.93950101254089,0,7.90508151931177,8.58731497935166,1.78819938646014,4.55297473122497,1.19980546198682,2.54140454146129,3.89455662452539,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,2.70124457927428,3.89379031362618,7.53611292492341,2.36373244159177,2.77995034277042,7.78634866779954,1.95180664444056,1.37941262660084,2.34080768746954,2.71268672104287,4.28629944653366,3.07472928683639,4.49768277886698,5.43277078551933,2.80238390812695,3.78212160335639,1.58356011747554,3.28793598641362,3.33656699070717,2.78601733217733,2.67516777330327,3.38358253591438,0,2.05878325691772,1.42081749697796,8.07790512888457,6.80125573945179,3.6012412292203,7.10234206755631,3.34499193970586,4.47374627373397,3.95307706075693,3.48755421819505,5.3712057488898,3.45575684818309,2.46251196118643,2.10778904819225,3.21639972335731,3.95190207523891,4.56301823785264,2.94405927989778,2.77842453424068,1.98251269790279,1.32225283331772,3.83918850963421,2.78684006232526,1.28867461322093,1.4117846723634,1.33426826306922,1.14135375667535,0,1.31759163779209,0.754005626400808,1.98956472041151,1.16978452271472,1.79763881730844,1.72910439899755,2.58883655230677,5.87970492954553,3.42745537829186,5.63538678365402,4.48032921259691,4.07300223052014,6.8031745293609,4.80597682144355,3.54264355151045,2.82597710114475,5.79966670432462,2.37162101669719,1.33476084572875,0.589676985339609,0.899448449539415,0.608580364165509,0.72353147925725,0.763877555344259,1.72617682470486,0.972811360650212,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.76805214562978,2.15276896226295,3.85954817090694,5.91210208533135,3.03186258832776,2.28150967018836,5.26209765903083,4.22442446919304,4.35516269348721,6.42717830392237,6.43941037930736,4.09851374676097,5.97954662051692,2.87018583583477,3.11340297959902,2.24490476425664,4.77341893318988,1.50791283939272,3.80733978673097,6.39293554924747,4.69092468718045,2.40825884981688,1.87538698547525,2.95082901678016,4.29200576247434,5.04813151066011,5.85658116444958,7.97066571611356,8.12493913038677,11.1399337041197,11.3230612315533,6.47697122679831,8.76767573733936,10.6727700045561,7.71171159412337,3.12268187458191,2.67098405500883,5.04949573996086,4.28922319728592,3.98235415019888,2.91336763385978,3.32555912661226,1.13163047853539,2.06711325016541,2.45948118355142,2.32585463851399,4.36240475373007,1.78248689192361,2.21225730555071,2.10837217149998,1.03135543248187,5.10659408630682,2.70091641046965,5.04498866752743,2.7863814554107,4.96552654198366,2.49716344642899,2.46823530903181,11.2652031172402,2.58138878870081,2.54198485036584,1.10264199027481,2.96795255294664,5.16686165426898,2.89502039655148,1.67121281604391,3.11867709515616,1.1659233465194,2.41052892613663,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,0.686334519619568,8.83887835968048,7.97723278244851,5.11339903076368,0.954670618015114,4.4287039101359,1.21991680276109,1.83609079397062,2.71814784818809,1.74690050996942,2.15782954215713,3.47144514046411,1.57053565190418,2.33306951925227,3.72803587852155,2.25477175473676,4.63501292736334,2.48187735685646,4.27792614356905,2.97067593998782,2.53434188236167,5.28107573905893,3.3853140059427,5.87212328783981,1.20792060413003,0,1.58005560314089,1.21635129174099,0.821687657318618,1.29920822977795,0.358053391334963,0.39736270956253,0.841368146639782,0.590758108698309,1.00966449948148,1.143102099825,0.403304740547362,0.584747284438515,0.577271049841977,0.935015217452552,3.40095575422817,0.887943813496259,1.52513556236109,2.18250001273302,5.9888774149979,5.2551093126331,5.67770035228522,6.00231461421384,3.51100472824754,4.51801474093653,5.06357760157895,4.58316410751517,3.78077001156113,2.05524755931193,3.7769694869485,4.72515750162264,0.900642406448441,4.07828168085784,4.14208249401456,3.21740777510948,4.78829848081237,3.75613932659095,2.67417388775123,4.82110274044359,2.02227859295016,3.11145418922261,3.5025959730612,2.88827288632634,3.28506375292937,2.5347929989024,1.32038438970253,1.87283014939765,1.98477972455095,2.06767688240208,3.33405583898152,1.62238056322798,3.27945674788299,2.88460130562315,3.23837624295674,2.05721551431249,1.4198064492747,3.33810665926249,2.61623549938191,2.35273451038327,1.69229215783353,0.182927972872773,1.8414879800649,2.44447404922551,0,1.66089025373844,2.06859412988683,4.91077251803627,1.39443157067369,3.47231899766054,6.74488560432454,2.57324769289949,3.43793686477277,5.35607329792761,1.32354851471709,1.85494268496337 | ||
|short_description=p3@6430527G18Rik | |short_description=p3@6430527G18Rik | ||
}} | }} |
Latest revision as of 23:19, 26 September 2015
Short description: | p3@6430527G18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_6430527G18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_ENSMUST00000038422, NM_145836, uc007oia.2_5end |
EntrezGene: | 6430527G18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.81e-10 | 44 |
neurectodermal cell | 1.81e-10 | 44 |
neural cell | 2.18e-10 | 43 |
embryonic cell | 7.74e-09 | 70 |
electrically responsive cell | 6.32e-08 | 39 |
electrically active cell | 6.32e-08 | 39 |
neuron | 5.26e-07 | 33 |
neuronal stem cell | 5.26e-07 | 33 |
neuroblast | 5.26e-07 | 33 |
electrically signaling cell | 5.26e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.73e-13 | 95 |
ectoderm | 8.73e-13 | 95 |
presumptive ectoderm | 8.73e-13 | 95 |
nervous system | 1.21e-11 | 75 |
central nervous system | 1.08e-10 | 73 |
structure with developmental contribution from neural crest | 3.00e-10 | 92 |
peripheral nervous system | 1.94e-07 | 11 |
compound organ | 4.62e-07 | 43 |