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FFCP PHASE1:Mm9::chr1:186823757..186823853,-: Difference between revisions

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(Created page with "{{FFCP |id=chr1:186823757..186823853,- |short_description=p1@Mark1 |description=CAGE_peak_1_at_Mark1_5end |association_with_transcript=-329bp_to_ENSMUST00000027929,NM_1455...")
 
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{{FFCP
{{FFCP
|id=chr1:186823757..186823853,-
|DHSsupport=NA
|short_description=p1@Mark1
|DPIdataset=NA
|description=CAGE_peak_1_at_Mark1_5end
|association_with_transcript=-329bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end
|EntrezGene=226778
|EntrezGene=226778
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8VHJ5,Q14DQ3,C9K101
|UniProt=Q8VHJ5,Q14DQ3,C9K101
|association_with_transcript=-329bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end
|cluster_id=chr1:186823757..186823853,-
|description=CAGE_peak_1_at_Mark1_5end
|id=chr1:186823757..186823853,-
|ontology_enrichment_celltype=CL:0000393!1.82e-13!39;CL:0000211!1.82e-13!39;CL:0000117!1.75e-12!23;CL:0000337!1.75e-12!23;CL:0000540!3.18e-12!33;CL:0000047!3.18e-12!33;CL:0000031!3.18e-12!33;CL:0000404!3.18e-12!33;CL:0000055!1.00e-10!50;CL:0002319!8.67e-10!43;CL:0000221!9.66e-10!44;CL:0000133!9.66e-10!44
|ontology_enrichment_celltype_v019_2=CL:0000393,1.70e-13,39;CL:0000211,1.70e-13,39;CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0000540,3.00e-12,33;CL:0000047,3.00e-12,33;CL:0000031,3.00e-12,33;CL:0000404,3.00e-12,33;CL:0002319,8.28e-10,43;CL:0000221,9.22e-10,44;CL:0000133,9.22e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.73e-24!73;UBERON:0005743!2.73e-24!73;UBERON:0000073!2.61e-23!75;UBERON:0001016!2.61e-23!75;UBERON:0004121!4.98e-23!102;UBERON:0000924!4.98e-23!102;UBERON:0006601!4.98e-23!102;UBERON:0001049!1.40e-20!52;UBERON:0005068!1.40e-20!52;UBERON:0006241!1.40e-20!52;UBERON:0007135!1.40e-20!52;UBERON:0002346!3.59e-20!71;UBERON:0003075!3.59e-20!71;UBERON:0007284!3.59e-20!71;UBERON:0000955!4.12e-19!50;UBERON:0006238!4.12e-19!50;UBERON:0002616!1.48e-18!49;UBERON:0000033!2.24e-18!63;UBERON:0002020!4.31e-17!34;UBERON:0003080!5.96e-17!40;UBERON:0003056!6.78e-17!49;UBERON:0002780!1.50e-16!39;UBERON:0001890!1.50e-16!39;UBERON:0006240!1.50e-16!39;UBERON:0002791!1.26e-14!29;UBERON:0003528!1.26e-14!29;UBERON:0001893!1.26e-14!29;UBERON:0000468!1.99e-11!333;UBERON:0000956!3.83e-11!21;UBERON:0001869!3.83e-11!21;UBERON:0000203!3.83e-11!21;UBERON:0000025!8.27e-11!114;UBERON:0004111!3.29e-10!122;UBERON:0000153!3.89e-09!94;UBERON:0007811!9.16e-09!86;UBERON:0002619!1.35e-08!17;UBERON:0000922!1.41e-08!328;UBERON:0002021!2.47e-07!10;UBERON:0000411!2.47e-07!10;UBERON:0001950!2.47e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-24,73;UBERON:0004121,1.18e-23,95;UBERON:0000924,1.18e-23,95;UBERON:0006601,1.18e-23,95;UBERON:0001016,2.31e-23,75;UBERON:0010371,5.65e-22,73;UBERON:0002346,2.71e-21,64;UBERON:0003075,2.71e-21,64;UBERON:0007284,2.71e-21,64;UBERON:0000073,3.22e-21,54;UBERON:0001049,1.26e-20,52;UBERON:0005068,1.26e-20,52;UBERON:0006241,1.26e-20,52;UBERON:0007135,1.26e-20,52;UBERON:0000955,4.12e-18,47;UBERON:0006238,4.12e-18,47;UBERON:0010314,1.36e-17,92;UBERON:0002616,1.46e-17,46;UBERON:0002020,3.94e-17,34;UBERON:0003080,5.46e-17,40;UBERON:0003056,6.22e-17,49;UBERON:0002780,1.38e-16,39;UBERON:0001890,1.38e-16,39;UBERON:0006240,1.38e-16,39;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0000956,3.63e-11,21;UBERON:0001869,3.63e-11,21;UBERON:0000203,3.63e-11,21;UBERON:0000025,1.05e-10,114;UBERON:0004111,4.12e-10,122;UBERON:0000922,8.63e-09,320;UBERON:0002619,1.30e-08,17;UBERON:0002021,2.39e-07,10;UBERON:0000411,2.39e-07,10;UBERON:0001950,2.39e-07,10
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3962949352,6.38120416534019,13.1869169472431,10.0753138167161,6.01886524842436,53.6514250486213,46.953174123732,47.5503276154699,52.7589269795121,32.1988784292202,40.7912704590438,36.4512150125175,47.7340475417674,43.5016712624836,48.6694693046711,16.5021882658841,25.936616771067,15.3660245178721,15.5588298923708,19.2844109617744,25.1865606576519,16.6685045851211,20.1914356094116,20.5388294138762,21.9846574234504,16.7296337927558,17.5422497489051,17.0427543595186,20.2959733123436,20.1598496034203,24.7672719467198,17.9620705214526,15.2398284166327,21.8405527425753,15.1614887738429,14.4005086001874,17.9250564220931,13.35242663705,17.8776092457764,16.7514697139288,17.7690676572521,19.2074371516411,14.994973551957,16.2964936615034,12.906272248128,19.6934130086129,19.0113650984837,14.7323175541088,17.0430525304563,14.6609024345667,26.2301106834843,15.9073493742878,18.0491685400571,15.1117782334386,9.04424818390014,10.2021847672985
|phase1_expression=12.3314612270691,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,10.6304112688837,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,32.3554822197234,40.2466416941473,63.3236294957801,13.3006528539167,8.93903141159831,5.27246838562732,5.44403717407994,16.5183977517928,8.62515386189829,0,0,0,6.68874533693462,10.3152038377952,16.5015069528782,61.9088370230369,41.2612963832186,45.6358610524449,17.2810711355257,11.5608323494448,6.74924787961049,1.97773272513395,2.8419204597844,11.6844043102178,8.4528027170742,59.1030790158323,52.5173100110277,59.3116391010897,29.7077023779956,19.6573001446936,47.0364668985424,48.5936538062458,55.1531271966013,16.5173821499083,24.7713435885264,20.1224558565679,57.7661940258249,52.5139074277831,49.4867702028922,15.0758819460746,16.3201156909187,19.5581757154317,29.1682299618931,28.4743361598206,42.4990736481685,6.28527404665428,5.06329452715463,5.2175607966302,5.16254326188832,0.679971333707751,0.539703191637817,1.29955283489534,0,4.77511028447956,3.74946709671727,1.55871602761721,2.47337702157238,11.2674735821344,19.2489716121477,28.028576367731,35.5533351576666,1.29894624606728,1.01343946190039,2.02209778005913,3.19714863213368,2.07150306917737,7.12522267511159,11.2765462397988,10.0473607843007,10.8389283710347,9.64624899536784,15.6392980490487,7.41432888845085,1.73036477414062,20.2439099687876,3.5384422077995,10.676612096529,3.5334642953663,3.39412677194655,7.45567044872489,17.8596286177044,20.1068838540917,1.78819938646014,0,0,0,20.9706895166752,26.0775343606617,51.3926300141615,42.0654854865309,44.2387741181472,20.5710164113964,26.6075671431123,22.0991419555186,6.46916247172484,10.3616330957807,3.99839526184301,14.9638509407109,15.1735388926092,23.0479526150847,16.5775299619287,19.3904022581284,12.811372028485,15.7418897260344,5.69147415625834,14.2274875335676,16.0740168142646,15.1317966780996,14.0285268753648,10.0097009721215,15.3230953269753,12.9642745937004,12.3401245427466,0,0,0,13.8774267598786,8.44293815931946,9.7233513188948,9.70653415899362,10.0349758191176,8.02188987014367,7.67362017676346,13.1453966685813,10.2753501283109,10.6963902443762,8.37254066803386,9.48505071686512,5.84799949701329,6.58650345873152,6.84452735677896,22.2907345477975,44.2489833230923,0.330418782983798,1.32225283331772,10.6644125267617,12.5407802804637,13.0156135935314,12.1010114774006,10.229390016864,9.70150693174052,4.2707615539006,5.76446341534038,4.27269854960458,6.96347652144028,5.26403035221624,4.49409704327111,2.59365659849633,2.38969527905241,5.69003702859245,11.9960938240215,6.76246414038483,9.9789150644204,7.95205197387266,9.32806404541237,10.3707920883782,3.54264355151045,3.61097074035162,2.09775178667061,1.77871576252289,4.50481785433454,3.73462090715086,2.69834534861824,1.21716072833102,2.65294875727659,2.29163266603278,3.74004978686054,2.43202840162553,4.3929826110093,11.5014565221884,6.32639611036456,5.30464044294753,3.53610429125956,2.33216637578486,2.8946611281802,3.69506380333209,8.90609635321278,13.2001630918041,7.29903868833309,10.3263709246941,14.4055381399962,11.1880511216426,18.1474292507753,24.4334473364596,24.582580551014,37.312415865852,4.7520361267564,5.87128938344045,6.36455857758651,0,0,2.95058563811422,5.24279817978992,17.9816660786327,14.8858841972098,16.5574294830442,4.29200576247434,16.0909191902291,19.5219372148319,12.7099804662351,10.0366895140072,12.6995244226965,15.5692091933858,12.5491317519217,17.5353514746787,11.8586333383957,31.8108103257589,31.2268187458191,14.6013795007149,23.455722146915,21.7760562323747,2.65490276679926,5.58395463156457,7.86041248108353,6.22396763194464,8.85905678642318,8.30074899448604,9.8202751403924,8.72480950746013,6.77345018930971,5.37262488490887,2.10837217149998,1.03135543248187,17.0219802876894,15.1251318986301,15.9111181052788,9.43082954139006,14.7192393923087,19.4422011186257,21.8850197400821,20.3991515906782,2.58138878870081,7.62595455109753,5.73373834942901,16.6535115470895,25.1884505645613,20.4460815506448,17.5477345684611,22.8155850645635,2.33184669303881,23.5490133553347,1.19609616558497,18.3684312487268,7.59297562215818,1.50694765603753,0.683471138605126,1.83022538565218,0.339956859987711,0,0,2.86401185404534,13.91878371757,10.9792512248498,11.5565714679327,8.99079672862215,8.29777742235475,7.41753905116514,12.7286321817017,7.0674104335688,8.81381818384192,3.10669656543463,0.56369293868419,16.5963366108816,14.2294301793104,13.0282296190512,10.5911055251739,8.61676240002969,9.74065080759758,6.77062801188541,5.34782656571125,1.93267296660805,1.72818003754719,0.948033361884535,7.70355818102624,8.52500944468066,4.02754551231165,5.01274747868948,4.76835251475036,1.9231271923195,1.03382669022204,1.41353029927407,2.209997392995,1.10908803650525,1.94915761479505,1.25075394132428,1.98690733708667,10.4295976462997,4.21773311410723,1.07656627931371,3.35769232728157,8.113962949352,6.38120416534019,13.1869169472431,10.0753138167161,6.01886524842436,53.6514250486213,46.953174123732,47.5503276154699,52.7589269795121,32.1988784292202,40.7912704590438,36.4512150125175,47.7340475417674,43.5016712624836,48.6694693046711,16.5021882658841,25.936616771067,15.3660245178721,15.5588298923708,19.2844109617744,25.1865606576519,16.6685045851211,20.1914356094116,20.5388294138762,21.9846574234504,16.7296337927558,17.5422497489051,17.0427543595186,20.2959733123436,20.1598496034203,24.7672719467198,17.9620705214526,15.2398284166327,21.8405527425753,15.1614887738429,14.4005086001874,17.9250564220931,13.35242663705,17.8776092457764,16.7514697139288,17.7690676572521,19.2074371516411,14.994973551957,16.2964936615034,12.906272248128,19.6934130086129,19.0113650984837,14.7323175541088,17.0430525304563,14.6609024345667,26.2301106834843,15.9073493742878,18.0491685400571,15.1117782334386,9.04424818390014,10.2021847672985
|short_description=p1@Mark1
}}
}}

Latest revision as of 23:06, 26 September 2015

Short description:p1@Mark1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mark1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -329bp_to_ENSMUST00000027929, NM_145515, uc007dyt.2, uc011wxy.1_5end
EntrezGene:Mark1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mark1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D940.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B363.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C361.91
Mouse Granule cells, donor2.CNhs12357.11731-123E341.26
Mouse Granule cells, donor3.CNhs12108.11636-122C745.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D559.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D959.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D655.15
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D457.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F452.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D849.49
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.17
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.50
Mouse Schwann, donor1.CNhs12507.11728-123D96.29
Mouse Schwann, donor2.CNhs12573.11746-123F95.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C511.28
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.65
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.97
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F151.39
cortex, adult.CNhs10473.12-14D542.07
cortex, neonate N30.CNhs11107.1392-42F244.24
diencephalon, adult.CNhs10482.20-12F220.57
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C614.96
eyeball, embryo E14.CNhs10521.399-16E215.17
eyeball, embryo E15.CNhs10593.426-16C923.05
eyeball, embryo E17.CNhs11023.1261-18D416.58
eyeball, neonate N00.CNhs11207.633-15C619.39
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G815.74
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H216.07
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A814.03
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B512.96
gonad, embryo E13.CNhs11044.1564-45I612.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E913.88
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C810.03
heart, embryo E16.CNhs11021.457-17C68.02
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E310.28
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G19.49
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G144.25
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D813.02
intestine, embryo E16.CNhs10585.463-22H412.10
intestine, embryo E17.CNhs10582.482-18D310.23
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F812.00
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G79.33
kidney, neonate N10.CNhs11206.758-6D510.37
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F813.20
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A614.41
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C618.15
lung, neonate N06.CNhs11212.683-20E524.43
lung, neonate N07.CNhs11111.715-19A324.58
lung, neonate N10.CNhs11219.750-23E637.31
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.54
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I731.23
ovary, embryo E18.CNhs11040.505-44H714.60
ovary, neonate N00.CNhs11217.1299-22I423.46
oviduct, adult pregnant day01.CNhs10500.988-6G621.78
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E615.13
pituitary gland, embryo E13.CNhs11009.370-44C715.91
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B914.72
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F521.89
pituitary gland, neonate N00.CNhs11190.1308-22E920.40
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C316.65
skin, neonate N00.CNhs11124.650-25G425.19
skin, neonate N03.CNhs11215.662-22H320.45
skin, neonate N06.CNhs11097.693-20I517.55
skin, neonate N10.CNhs11108.762-6C422.82
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C923.55
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C118.37
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E313.92
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D411.56
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A912.73
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I18.81
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F516.60
testis, embryo E15.CNhs11034.443-27C514.23
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I510.59
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B79.74
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A347.55
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A636.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.67
whole body, embryo E11.CNhs11014.324-5I816.50
whole body, embryo E12.CNhs10587.857-27C925.94
whole body, embryo E13.CNhs10512.372-23H215.37
whole body, embryo E14.5.CNhs10578.420-27D215.56
whole body, embryo E14.CNhs10519.395-14B119.28
whole body, embryo E16.CNhs10514.453-14F225.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.04
whole body, embryo E17.5.CNhs10513.490-9F914.66
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C218.05
whole body, neonate N01.CNhs10576.659-23C615.11
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.70e-1339
electrically active cell1.70e-1339
CNS neuron (sensu Vertebrata)1.65e-1223
neuroblast (sensu Vertebrata)1.65e-1223
neuron3.00e-1233
neuronal stem cell3.00e-1233
neuroblast3.00e-1233
electrically signaling cell3.00e-1233
neural cell8.28e-1043
ectodermal cell9.22e-1044
neurectodermal cell9.22e-1044

Uber anatomy
Ontology termp-valuen
central nervous system2.40e-2473
ectoderm-derived structure1.18e-2395
ectoderm1.18e-2395
presumptive ectoderm1.18e-2395
nervous system2.31e-2375
ecto-epithelium5.65e-2273
neurectoderm2.71e-2164
neural plate2.71e-2164
presumptive neural plate2.71e-2164
regional part of nervous system3.22e-2154
neural tube1.26e-2052
neural rod1.26e-2052
future spinal cord1.26e-2052
neural keel1.26e-2052
brain4.12e-1847
future brain4.12e-1847
structure with developmental contribution from neural crest1.36e-1792
regional part of brain1.46e-1746
gray matter3.94e-1734
anterior neural tube5.46e-1740
pre-chordal neural plate6.22e-1749
regional part of forebrain1.38e-1639
forebrain1.38e-1639
future forebrain1.38e-1639
brain grey matter1.17e-1429
regional part of telencephalon1.17e-1429
telencephalon1.17e-1429
cerebral cortex3.63e-1121
cerebral hemisphere3.63e-1121
pallium3.63e-1121
tube1.05e-10114
anatomical conduit4.12e-10122
embryo8.63e-09320
regional part of cerebral cortex1.30e-0817
occipital lobe2.39e-0710
visual cortex2.39e-0710
neocortex2.39e-0710
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