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FFCP PHASE1:Mm9::chr6:149357495..149357560,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12121
|EntrezGene=12121
|HGNC=
|HGNC=
|MCL_coexpression_id=826
|TSSclassifier=NA
|UniProt=Q8BR07
|UniProt=Q8BR07
|association_with_transcript=0bp_to_ENSMUST00000086829,ENSMUST00000111513_5end
|association_with_transcript=0bp_to_ENSMUST00000086829,ENSMUST00000111513_5end
|cluster_id=chr6:149357495..149357560,+
|description=CAGE_peak_1_at_Bicd1_5end
|description=CAGE_peak_1_at_Bicd1_5end
|id=chr6:149357495..149357560,+
|id=chr6:149357495..149357560,+
|ontology_enrichment_celltype=CL:0000540!3.11e-16!33;CL:0000047!3.11e-16!33;CL:0000031!3.11e-16!33;CL:0000404!3.11e-16!33;CL:0000393!3.83e-16!39;CL:0000211!3.83e-16!39;CL:0000221!3.53e-11!44;CL:0000133!3.53e-11!44;CL:0000117!6.31e-11!23;CL:0000337!6.31e-11!23;CL:0002319!9.67e-11!43;CL:0000055!1.41e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.29e-16,33;CL:0000047,2.29e-16,33;CL:0000031,2.29e-16,33;CL:0000404,2.29e-16,33;CL:0000393,2.83e-16,39;CL:0000211,2.83e-16,39;CL:0000221,2.87e-11,44;CL:0000133,2.87e-11,44;CL:0000117,5.19e-11,23;CL:0000337,5.19e-11,23;CL:0002319,7.95e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.69e-26!75;UBERON:0001016!5.69e-26!75;UBERON:0001017!7.51e-26!73;UBERON:0005743!7.51e-26!73;UBERON:0002346!1.20e-21!71;UBERON:0003075!1.20e-21!71;UBERON:0007284!1.20e-21!71;UBERON:0004121!1.30e-20!102;UBERON:0000924!1.30e-20!102;UBERON:0006601!1.30e-20!102;UBERON:0000033!2.06e-19!63;UBERON:0001049!6.68e-19!52;UBERON:0005068!6.68e-19!52;UBERON:0006241!6.68e-19!52;UBERON:0007135!6.68e-19!52;UBERON:0000955!5.41e-18!50;UBERON:0006238!5.41e-18!50;UBERON:0002616!2.48e-17!49;UBERON:0003056!1.35e-16!49;UBERON:0002020!4.55e-15!34;UBERON:0003080!1.68e-14!40;UBERON:0002780!7.71e-14!39;UBERON:0001890!7.71e-14!39;UBERON:0006240!7.71e-14!39;UBERON:0002791!1.96e-12!29;UBERON:0003528!1.96e-12!29;UBERON:0001893!1.96e-12!29;UBERON:0000956!4.45e-09!21;UBERON:0001869!4.45e-09!21;UBERON:0000203!4.45e-09!21;UBERON:0002619!1.59e-07!17;UBERON:0002021!3.25e-07!10;UBERON:0000411!3.25e-07!10;UBERON:0001950!3.25e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.39e-26,75;UBERON:0001017,4.49e-26,73;UBERON:0002346,2.05e-23,64;UBERON:0003075,2.05e-23,64;UBERON:0007284,2.05e-23,64;UBERON:0004121,2.77e-21,95;UBERON:0000924,2.77e-21,95;UBERON:0006601,2.77e-21,95;UBERON:0000073,2.14e-20,54;UBERON:0010314,1.06e-19,92;UBERON:0001049,3.54e-19,52;UBERON:0005068,3.54e-19,52;UBERON:0006241,3.54e-19,52;UBERON:0007135,3.54e-19,52;UBERON:0010371,6.65e-18,73;UBERON:0003056,9.89e-17,49;UBERON:0000955,1.99e-16,47;UBERON:0006238,1.99e-16,47;UBERON:0002616,8.93e-16,46;UBERON:0002020,3.43e-15,34;UBERON:0003080,1.29e-14,40;UBERON:0002780,5.97e-14,39;UBERON:0001890,5.97e-14,39;UBERON:0006240,5.97e-14,39;UBERON:0003528,1.57e-12,29;UBERON:0002791,1.57e-12,29;UBERON:0001893,1.57e-12,29;UBERON:0000956,3.81e-09,21;UBERON:0001869,3.81e-09,21;UBERON:0000203,3.81e-09,21;UBERON:0002619,1.41e-07,17;UBERON:0002021,2.89e-07,10;UBERON:0000411,2.89e-07,10;UBERON:0001950,2.89e-07,10
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|phase1_expression=11.69086583865,2.79180326111489,5.45999087267443,0,1.00179145989269,7.21880869221126,6.54115393667472,1.16210991097419,0,0,0,0,0,0.174840804837995,0.999329285446988,1.61980213911861,2.09868563438444,0,0.685572168028694,0.42438965179803,7.05859308253879,0.0992909512008853,0,3.51983330145495,3.44113921600755,6.31655160526522,3.87685796543167,5.38678081714723,2.28028103347649,1.76421090831952,3.99114919179548,6.35030673459631,4.92051830067656,0,1.1554064790051,2.49351968037739,3.67504841272264,0,0,0,0,0,0,3.52511090331616,4.1564541800001,6.9747765821439,0,3.2703773457067,1.09843091367236,3.11087838518853,1.25987779462826,1.43752564364972,0.167782606057736,0,0,7.46052364504246,6.01720223871389,21.6582278756526,13.3528864167335,15.869729378161,17.1134478946668,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,2.30530983192933,15.0349937847293,9.31540974488665,13.4607975264884,15.996455126613,14.7981922437581,12.1265891222804,7.66763768145891,12.8690630125403,35.2370819198044,26.0482169693783,33.4862242498611,13.8480602116704,11.2529801630964,8.33461392890816,17.8677119360884,29.826418331679,26.586895113165,39.4802304534715,33.4573449877892,23.1135312823373,6.13382165998791,6.8014404096107,6.37701875143691,0.860423876981386,0,0.539703191637817,0,0,1.40444420131752,0,0,0,21.4081998060554,0,0,0,1.5154372870785,1.26679932737549,2.52762222507392,2.39786147410026,1.29468941823586,7.42210695324124,3.12273588179045,4.26251669636998,4.15107895060905,3.01445281105245,6.93773372100658,1.38233250462643,1.97755974187499,9.9773556274739,1.76922110389975,1.61766849947409,1.32504911076236,2.42437626567611,0,27.2286141220739,36.4437269855412,1.27728527604296,1.43778149407104,0.599902730993408,1.14363204365758,38.4961943270394,26.0775343606617,19.9790419859454,31.1145533144175,28.8958466783273,34.0772393077679,29.6901511413996,9.47106083807942,1.8661045591514,4.54900965180614,6.31325567659422,6.24578126220978,4.82794419310293,11.343914177737,11.0014517020072,11.3620953582718,13.5800543501941,12.6497328155634,13.7112786491678,1.07783996466421,1.70195472151037,2.99116911078713,2.19195732427575,3.89266148915837,2.089512999133,1.64625709126355,3.18454826909589,0,0.257347907114715,0.284163499395593,2.69263504296152,2.81431271977315,3.6012412292203,4.49814997611899,5.1158700254325,4.31947916084659,2.09280550275367,3.75582761959467,3.85325629811659,3.45575684818309,3.11918181750281,3.16168357228837,3.36259971078264,3.29325172936576,2.41571553768669,31.5434922846191,27.3726268928897,1.98251269790279,3.17340679996253,5.54549451391608,10.4506502337197,9.40732467651281,6.45387278794696,7.56085349072559,6.84812254005213,1.42358718463353,5.10566759644434,3.51869292320377,5.37182474511107,3.31438948102504,3.59527763461689,4.53889904736858,1.7922714592893,0.948339504765408,4.68418901699888,6.76246414038483,4.48032921259691,3.29719228184964,4.69909993265134,4.61626721007078,5.90440591918409,9.57692239832386,5.42947521255922,0.296452627087149,2.00214126859313,1.17935397067922,1.79889689907883,1.01430060694251,0.241177159752417,2.03700681425136,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,2.03228509183265,3.97931964718018,3.58522948172457,5.7713329163564,5.63256595892405,3.51763140627813,1.90434912708811,2.73187107000918,0.472905432318573,1.55025282754142,1.59454768657487,2.29408640602033,3.10832967358612,2.4590339958857,1.50791283939272,0.54390568381871,0,0.551873492609465,42.0642545768015,36.5700462167674,0,1.26235463602186,27.4492150892143,33.9681707538075,32.098086262187,20.790285421872,25.6218475194753,19.8153571552183,33.1944775373413,32.7326560860669,28.8560077900962,35.3453448063988,21.8587731220734,2.49291845134157,10.9134262766896,12.0428189769951,6.63725691699814,5.09839335925461,3.62788268357701,11.5049098651098,7.97315110778086,12.604841065701,7.49442050187841,6.90714086007261,8.19943970284859,15.1697643809192,23.1920938864997,14.4389760547462,23.8307724027652,8.64293251350289,1.68166288917581,4.50107773566344,9.57637261668277,8.74007206250146,7.24015690649332,3.65357938937519,0.23467170806371,1.48282449604674,7.71849393192367,0.8244312647074,0.484393280087717,1.02531972377865,0.716234064018819,0.164140899745061,4.95517422270746,35.0453820799863,1.70870880797853,2.68302928352189,1.11116716421827,0.753473828018764,0.820165366326151,0.915112692826091,2.71965487990169,3.49878630809145,3.31679937130617,2.86401185404534,5.3777118908793,6.50622294805916,6.26430976766447,4.39085421630384,6.33251434863915,4.04593039154462,5.2898211664215,5.75863072364865,1.03691978633434,0,0,2.54178128274764,2.97825282822776,2.52786544847262,2.58319646955462,2.70329800785245,3.52071715937262,4.03633593016245,3.98465508817701,0.724752362478018,0.864090018773596,0.948033361884535,1.62180172232131,2.67048488628551,1.16928740680016,2.14832034800978,0.993406773906324,1.20195449519969,0.590758108698309,0.504832249740738,0.609654453239999,0.403304740547362,1.46186821109629,0.769694733122636,0.818138315270983,1.58711268530648,1.10992976687032,0.0897138566094757,0,4.63655025677257,8.44571139530319,8.24182309202693,2.57242054894879,7.52358156053045,39.5326289831947,39.12764510311,36.6653128601214,35.5736087451433,26.0331357512844,32.4819375877571,27.0009000092722,20.2644541450899,27.6416869480365,30.5478583933574,5.50072942196136,9.57659696162474,8.70741389346084,8.99494853152688,8.59413966774727,8.27295788025063,8.00088220085815,7.0051919461224,8.02298023979538,7.32821914115013,11.1530891951705,7.54505365544305,6.55490552289177,6.85069130732101,7.3517400263185,7.1444053692461,7.06894388263618,6.94473193669338,5.76920261124629,7.21274708658547,4.80016953339582,7.80893547101085,6.91464950847231,6.24989591519013,7.9992973353031,7.44608549446753,9.3293266165114,5.26139422875686,7.19761803383067,5.61142271657738,6.4062909787054,7.48634066054282,6.54769669071503,6.19747364743864,5.98010494041538,7.49431733813838,7.01794825336225,6.44613162144895,2.29545998482612,3.08827986767322,1.85494268496337
|short_description=p1@Bicd1
|short_description=p1@Bicd1
}}
}}

Latest revision as of 23:05, 26 September 2015

Short description:p1@Bicd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bicd1_5end
Coexpression cluster:MCL_coexpression_mm9:826
Association with transcript: 0bp_to_ENSMUST00000086829, ENSMUST00000111513_5end
EntrezGene:Bicd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bicd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D335.24
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D733.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.11
Mouse Schwann, donor1.CNhs12507.11728-123D96.13
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B227.23
cerebellum, neonate N30.CNhs11135.1395-42I236.44
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A438.50
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F119.98
cortex, adult.CNhs10473.12-14D531.11
cortex, neonate N30.CNhs11107.1392-42F228.90
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B229.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C911.34
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C611.36
eyeball, neonate N01.CNhs11140.1532-43E713.58
eyeball, neonate N02.CNhs11205.1551-44G812.65
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E831.54
hippocampus, neonate N00.CNhs11228.627-43G127.37
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C242.06
medulla oblongata, neonate N30.CNhs11200.1396-42A336.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.97
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.79
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D433.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.73
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I935.35
ovary, adult.CNhs10507.91-2I721.86
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I410.91
oviduct, adult pregnant day01.CNhs10500.988-6G612.04
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B99.58
pituitary gland, embryo E16.CNhs11036.449-43F68.74
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C935.05
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D46.26
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A139.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.29e-1633
neuronal stem cell2.29e-1633
neuroblast2.29e-1633
electrically signaling cell2.29e-1633
electrically responsive cell2.83e-1639
electrically active cell2.83e-1639
ectodermal cell2.87e-1144
neurectodermal cell2.87e-1144
CNS neuron (sensu Vertebrata)5.19e-1123
neuroblast (sensu Vertebrata)5.19e-1123
neural cell7.95e-1143

Uber anatomy
Ontology termp-valuen
nervous system3.39e-2675
central nervous system4.49e-2673
neurectoderm2.05e-2364
neural plate2.05e-2364
presumptive neural plate2.05e-2364
ectoderm-derived structure2.77e-2195
ectoderm2.77e-2195
presumptive ectoderm2.77e-2195
regional part of nervous system2.14e-2054
structure with developmental contribution from neural crest1.06e-1992
neural tube3.54e-1952
neural rod3.54e-1952
future spinal cord3.54e-1952
neural keel3.54e-1952
ecto-epithelium6.65e-1873
pre-chordal neural plate9.89e-1749
brain1.99e-1647
future brain1.99e-1647
regional part of brain8.93e-1646
gray matter3.43e-1534
anterior neural tube1.29e-1440
regional part of forebrain5.97e-1439
forebrain5.97e-1439
future forebrain5.97e-1439
brain grey matter1.57e-1229
regional part of telencephalon1.57e-1229
telencephalon1.57e-1229
cerebral cortex3.81e-0921
cerebral hemisphere3.81e-0921
pallium3.81e-0921
regional part of cerebral cortex1.41e-0717
occipital lobe2.89e-0710
visual cortex2.89e-0710
neocortex2.89e-0710
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