FFCP PHASE1:Mm9::chr12:87419750..87419754,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21809 | |EntrezGene=21809 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q91YU7 | |UniProt=Q91YU7 | ||
|association_with_transcript=236bp_to_ENSMUST00000003687,NM_009368,uc007ohn.2_5end | |association_with_transcript=236bp_to_ENSMUST00000003687,NM_009368,uc007ohn.2_5end | ||
|cluster_id=chr12:87419750..87419754,- | |||
|description=CAGE_peak_7_at_Tgfb3_5end | |description=CAGE_peak_7_at_Tgfb3_5end | ||
|id=chr12:87419750..87419754,- | |id=chr12:87419750..87419754,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.33e-21,8;CL:0000128,1.20e-19,6;CL:0000126,1.20e-19,6;CL:0000127,1.20e-19,6;CL:0000333,1.62e-16,10;CL:0000095,1.62e-16,10;CL:0000243,1.62e-16,10;CL:0000123,1.62e-16,10;CL:0000125,1.62e-16,10;CL:0000030,1.62e-16,10;CL:0000339,1.62e-16,10;CL:0002293,1.30e-14,3;CL:0002605,2.02e-10,2;CL:0002604,2.02e-10,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0,0,3.05235218932625,1.97717564461025,6.80504646759992,2.09979632438044,2.87505128729943,0,0,0,0,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,1.92109152660777,0,0.135005938331691,0,0.285650984403804,0,0,0.575072826109418,0,0,0,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0.511290967734173,0,1.06001872353102,0,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.608930956624282,0.691846491768175,0.753613202763113,0,0,0.988779870937496,0.289198713839823,0,0.808834249737046,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0.324482526135515,0.916554274652847,0.373220911830279,0,0.841767423545896,0.260240885925407,0,0.180062129805349,0.452114453507145,0.136072998302656,0,0,0.258703370739016,0.431135985865684,0.567318240503458,0,0.43839146485515,2.22437799380478,0,1.64625709126355,0.398068533636986,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.639864751605702,0,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0.581857461502877,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.848725428875941,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.8858587585951,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0.117211686592203,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0,1.24645922567079,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0,0.922305443831782,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0,0.648032044930808,0.418176592028937,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0.234714477291508,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0,0.468207537349412,0.89635213366817,0.746661096422973,0,1.0429589335037,0.964546102318525,0.412085900803307,0.294397840268795,1.37147700954166,0.70990322463735,0.476872379894642,1.0174249164263,1.12931256498397,0.846146078916765,0.914639864363863,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0,0,3.05235218932625,1.97717564461025,6.80504646759992,2.09979632438044,2.87505128729943,0,0,0,0,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,1.92109152660777,0,0.135005938331691,0,0.285650984403804,0,0,0.575072826109418,0,0,0,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0.511290967734173,0,1.06001872353102,0,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.608930956624282,0.691846491768175,0.753613202763113,0,0,0.988779870937496,0.289198713839823,0,0.808834249737046,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0.324482526135515,0.916554274652847,0.373220911830279,0,0.841767423545896,0.260240885925407,0,0.180062129805349,0.452114453507145,0.136072998302656,0,0,0.258703370739016,0.431135985865684,0.567318240503458,0,0.43839146485515,2.22437799380478,0,1.64625709126355,0.398068533636986,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.639864751605702,0,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0.581857461502877,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.848725428875941,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.8858587585951,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0.117211686592203,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0,1.24645922567079,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0,0.922305443831782,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0,0.648032044930808,0.418176592028937,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0.234714477291508,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0,0.468207537349412,0.89635213366817,0.746661096422973,0,1.0429589335037,0.964546102318525,0.412085900803307,0.294397840268795,1.37147700954166,0.70990322463735,0.476872379894642,1.0174249164263,1.12931256498397,0.846146078916765,0.914639864363863,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p7@Tgfb3 | |short_description=p7@Tgfb3 | ||
}} | }} |
Latest revision as of 23:04, 26 September 2015
Short description: | p7@Tgfb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tgfb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 236bp_to_ENSMUST00000003687, NM_009368, uc007ohn.2_5end |
EntrezGene: | Tgfb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.33e-21 | 8 |
oligodendrocyte | 1.20e-19 | 6 |
macroglial cell | 1.20e-19 | 6 |
astrocyte | 1.20e-19 | 6 |
migratory neural crest cell | 1.62e-16 | 10 |
neuron associated cell | 1.62e-16 | 10 |
glial cell (sensu Vertebrata) | 1.62e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 1.62e-16 | 10 |
glial cell | 1.62e-16 | 10 |
glioblast | 1.62e-16 | 10 |
glioblast (sensu Vertebrata) | 1.62e-16 | 10 |
epithelial cell of thymus | 1.30e-14 | 3 |
astrocyte of the cerebral cortex | 2.02e-10 | 2 |
astrocyte of the hippocampus | 2.02e-10 | 2 |