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FFCP PHASE1:Mm9::chr4:40669494..40669545,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15502
|EntrezGene=15502
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P63037,Q5NTY0
|UniProt=P63037,Q5NTY0
|association_with_transcript=0bp_to_ENSMUST00000030118,NM_008298,uc008sht.2_5end
|association_with_transcript=0bp_to_ENSMUST00000030118,NM_008298,uc008sht.2_5end
|cluster_id=chr4:40669494..40669545,+
|description=CAGE_peak_1_at_Dnaja1_5end
|description=CAGE_peak_1_at_Dnaja1_5end
|id=chr4:40669494..40669545,+
|id=chr4:40669494..40669545,+
|ontology_enrichment_celltype=CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0002319!4.04e-07!43;CL:0000221!4.46e-07!44;CL:0000133!4.46e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,1.79e-13,33;CL:0000047,1.79e-13,33;CL:0000031,1.79e-13,33;CL:0000404,1.79e-13,33;CL:0000117,1.48e-12,23;CL:0000337,1.48e-12,23;CL:0000393,1.48e-09,39;CL:0000211,1.48e-09,39;CL:0002319,4.07e-07,43;CL:0000221,4.50e-07,44;CL:0000133,4.50e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.30e-22!73;UBERON:0005743!6.30e-22!73;UBERON:0000073!2.13e-21!75;UBERON:0001016!2.13e-21!75;UBERON:0002346!9.76e-21!71;UBERON:0003075!9.76e-21!71;UBERON:0007284!9.76e-21!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0000033!2.94e-19!63;UBERON:0000955!2.30e-18!50;UBERON:0006238!2.30e-18!50;UBERON:0003056!3.57e-18!49;UBERON:0002616!8.15e-18!49;UBERON:0004121!3.21e-17!102;UBERON:0000924!3.21e-17!102;UBERON:0006601!3.21e-17!102;UBERON:0002020!2.56e-16!34;UBERON:0003080!3.20e-16!40;UBERON:0002780!1.01e-15!39;UBERON:0001890!1.01e-15!39;UBERON:0006240!1.01e-15!39;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0000153!6.80e-12!94;UBERON:0007811!1.26e-11!86;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002021!8.10e-08!10;UBERON:0000411!8.10e-08!10;UBERON:0001950!8.10e-08!10;UBERON:0002619!1.28e-07!17;UBERON:0000468!1.67e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.02e-22,64;UBERON:0003075,4.02e-22,64;UBERON:0007284,4.02e-22,64;UBERON:0001017,6.37e-22,73;UBERON:0001016,2.15e-21,75;UBERON:0000073,1.30e-20,54;UBERON:0001049,2.10e-19,52;UBERON:0005068,2.10e-19,52;UBERON:0006241,2.10e-19,52;UBERON:0007135,2.10e-19,52;UBERON:0010314,1.96e-18,92;UBERON:0003056,3.57e-18,49;UBERON:0004121,8.80e-18,95;UBERON:0000924,8.80e-18,95;UBERON:0006601,8.80e-18,95;UBERON:0010371,3.39e-17,73;UBERON:0000955,1.14e-16,47;UBERON:0006238,1.14e-16,47;UBERON:0002020,2.56e-16,34;UBERON:0003080,3.20e-16,40;UBERON:0002616,3.91e-16,46;UBERON:0002780,1.01e-15,39;UBERON:0001890,1.01e-15,39;UBERON:0006240,1.01e-15,39;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0000956,1.62e-09,21;UBERON:0001869,1.62e-09,21;UBERON:0000203,1.62e-09,21;UBERON:0002021,8.10e-08,10;UBERON:0000411,8.10e-08,10;UBERON:0001950,8.10e-08,10;UBERON:0002619,1.28e-07,17;UBERON:0000922,1.91e-07,320
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372747,11.7725821495763,9.82714991268003,8.51613998610093,8.36158947585888,6.28166263512553,6.02038666563268,6.35113369129785,8.07741107013003,329.196676191567,22.2779653605528,17.0422245170811,25.6675568614143,17.5657359929714,17.5714370510409,9.03650737572305,20.0514752659683,29.5703351280505,128.039584037783,197.300554286638,10.4283669807299,10.9471616256689,9.14127518766963,11.1731907760904,10.9206284357164,8.54329825559439,8.53387691591779,10.0428878478713,9.08698049533329,9.14481679859998,7.66279007039988,9.06358290879698,12.1226920466815,6.42822961998629,4.76133805591944,18.6468200834214,28.9775756848606,18.8030770327768,7.72758376128762,5.81815673898664,6.04400360081975,4.93047271881851,6.52043735245972,58.7341916321749,65.3661835840191,50.4148051826669,79.9117297898147,61.6574267793578,48.3452094329408,58.0519350199353,57.190792809476,57.549085940994,60.0601961632111,41.099789643334,29.9268655050773,21.8539015365292,18.2330037801221,24.5247400274739,15.9943852351512,17.1129980407244,11.5379632053781,13.7995260124481,12.3821633764261,10.3926512954998,14.9014809695,18.0728109416873,14.5337095959053,17.5752535004177,20.9569224164552,20.1638727144049,15.6256468575601,18.1317796353455,15.8974833745149,14.7433778525729,12.4233064311536,18.8364590058384,14.3892952466005,16.2809228118522,15.5690878520685,14.2683818840763,14.7319038405192,14.3952360676613,20.2011217796786,13.64302708428,18.6173471689815,15.1415485972785,16.1134314833405,12.346023102793,9.74261253957989,12.3983752476066,10.09893954027,10.5208582637864,6.61774257358547,11.3615239454007
|phase1_expression=17.7765220286321,1.39590163055744,0.454999239389536,3.0246421130683,2.00358291978539,3.3575854382378,6.07392865548367,4.13194635013044,1.267098499365,1.40438715793196,3.93801326918661,6.06268408364557,5.47842335779858,4.02133851127388,15.6561588053361,18.0202987976945,35.6776557845355,4.25873923233621,4.52477630898938,6.36584477697045,61.5713420693745,10.1276770224903,16.194386926614,4.7997726838022,3.44113921600755,2.29692785646008,2.58457197695445,4.09395342103189,3.23039813075836,3.2763916868791,3.99114919179548,1.90509202037889,3.69038872550742,0,4.04392267651784,11.137721239019,6.53341940039581,3.76678467663217,9.37602413428561,4.71171369576418,1.76469446409304,4.09827290975067,2.91306211818692,6.29484089877886,7.50189291024408,5.32285581268876,4.69434806608824,2.39827672018491,1.97717564461025,5.24960727500565,2.79972843250725,17.2503077237966,2.51673909086605,5.80289713609076,7.39406358113421,6.43148590089868,5.73066879877513,6.18806510732931,32.7752666592548,29.6234948392338,43.1005354384202,2.37191172448392,3.55717918444456,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,3.45796474789399,34.4249512864146,30.7813539396255,34.703618622978,29.7077023779956,29.5963844875162,37.6046753589909,25.4948952908509,33.0918763179608,30.8324466798288,47.4996897676898,52.0726147738665,39.0383411681374,39.4311743926386,53.6540771673463,42.1566328492085,34.3285192119325,40.9499304041851,39.7748590389451,50.5419466836815,61.5118171223492,9.61722655331437,10.2777321745228,3.76823835312181,4.30211938490693,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,12.0782201313307,4.4311883870295,5.71529210126311,4.59341446863442,11.9716906810178,3.84979432242953,20.3844191765317,14.2213340630666,10.3915699685383,10.8944742154292,12.1325866803548,11.0758363327488,7.76813650941515,7.57054909230606,12.1439728736295,11.8741536541735,10.3776973765226,12.3592565253151,9.28950786372068,13.8233250462643,5.43828929015623,6.79616977523585,8.84610551949874,12.4560474459505,13.0296495891632,11.6370060752453,5.59175283654366,33.3770108593164,38.3287473468623,3.83185582812887,6.82946209683746,7.19883277192089,7.24300294316469,35.0510096207285,29.2800385803921,48.8795429719043,51.4519987769138,42.1930504595045,39.8953045554355,43.9673822913623,12.220723662038,6.34475550111474,6.57079171927554,7.57590681191306,25.1132454918018,24.8294272788151,23.7682011343061,22.4550178575215,18.5739642683125,23.4448108121275,23.0506242416933,15.0047955028629,16.5987354558289,22.6927296201383,20.2343792788541,14.4669183402199,11.3999372182495,9.05455632957633,8.64284972913362,18.9082553477569,6.31991868581911,7.46308930632674,5.11494298912067,18.2270679831242,18.2930326785255,22.5077576826269,17.0456209621351,16.1346670032871,20.6717931269087,19.3003174142839,15.0233104783787,12.1435956061856,11.3546296440302,9.19337798842933,8.35008738322314,6.72519942156529,7.90380415047782,6.57611451925822,55.3062564723655,48.5709770430223,4.95628174475697,7.40461586657924,21.3288250535234,21.5980104830208,10.4382643670896,8.0673409849337,8.00560957841533,6.27744566171445,7.59246498471219,6.58795818896044,7.03738584640755,5.76973768919337,3.11942539390592,5.39291645192533,6.05186539649144,5.97423819763102,8.91439134479484,14.8523066392647,14.6520056375005,13.2373363099454,9.50367187121366,10.5905088034381,8.85311519739602,6.19962621514329,6.12295038581362,5.30607804863742,2.07516838961004,16.3508203601772,15.1350426237166,11.9176919563972,13.7944882544182,10.3706178693539,9.67578236769395,8.0554918486227,5.5125977103512,6.31491250332587,7.18841032636773,5.20997326735905,3.12037673114561,3.03094653536534,2.51156378930677,2.8946611281802,5.91210208533135,18.759649765278,12.711268162478,13.7493519477902,13.1426539041561,7.03526281255626,6.18913466303636,8.58588050574315,9.77337893458384,6.2010113101657,10.5240147313941,6.55453258862952,8.80693407516067,5.35201516751593,4.52373851817817,11.4220193601929,2.45882136509518,7.45029215022778,34.6789274373631,42.5478422329697,3.11476396215683,5.04941854408746,18.9304931649754,13.6653560503823,19.6035291936847,13.1432838873904,12.0311284004493,18.6830510320629,21.8597778904443,16.9508397588561,22.9266911208984,39.5225219198823,7.94864477166304,16.2039699337202,12.3794089108718,7.58862565673663,13.2745138339963,13.595715624679,10.883648050731,5.84675747243284,3.83892460745005,6.7635732547664,3.6179961043551,5.08947221268508,7.84294232446387,7.26884543252377,4.21674434299995,6.18813259489121,21.1072555567349,24.3082476942269,15.9111181052788,20.1476812929697,17.3793428969428,22.652839835463,20.0749805134588,7.00269382963578,10.0908834467395,11.2270997557825,9.2621927183084,4.9465875882444,6.62004149453213,7.84068024066026,4.65552141612232,2.9545361954111,3.49777003955821,37.6413363081335,14.8657666294132,12.5895989457566,11.8524497516615,17.706634958441,19.2738861086645,11.4389086603261,3.90950388985867,5.318155188299,5.52799895217695,7.63736494412091,20.2455035891927,16.4688768372747,11.7725821495763,9.82714991268003,8.51613998610093,8.36158947585888,6.28166263512553,6.02038666563268,6.35113369129785,8.07741107013003,329.196676191567,22.2779653605528,17.0422245170811,25.6675568614143,17.5657359929714,17.5714370510409,9.03650737572305,20.0514752659683,29.5703351280505,128.039584037783,197.300554286638,10.4283669807299,10.9471616256689,9.14127518766963,11.1731907760904,10.9206284357164,8.54329825559439,8.53387691591779,10.0428878478713,9.08698049533329,9.14481679859998,7.66279007039988,9.06358290879698,12.1226920466815,6.42822961998629,4.76133805591944,18.6468200834214,28.9775756848606,18.8030770327768,7.72758376128762,5.81815673898664,6.04400360081975,4.93047271881851,6.52043735245972,58.7341916321749,65.3661835840191,50.4148051826669,79.9117297898147,61.6574267793578,48.3452094329408,58.0519350199353,57.190792809476,57.549085940994,60.0601961632111,41.099789643334,29.9268655050773,21.8539015365292,18.2330037801221,24.5247400274739,15.9943852351512,17.1129980407244,11.5379632053781,13.7995260124481,12.3821633764261,10.3926512954998,14.9014809695,18.0728109416873,14.5337095959053,17.5752535004177,20.9569224164552,20.1638727144049,15.6256468575601,18.1317796353455,15.8974833745149,14.7433778525729,12.4233064311536,18.8364590058384,14.3892952466005,16.2809228118522,15.5690878520685,14.2683818840763,14.7319038405192,14.3952360676613,20.2011217796786,13.64302708428,18.6173471689815,15.1415485972785,16.1134314833405,12.346023102793,9.74261253957989,12.3983752476066,10.09893954027,10.5208582637864,6.61774257358547,11.3615239454007
|short_description=p1@Dnaja1
|short_description=p1@Dnaja1
}}
}}

Latest revision as of 22:59, 26 September 2015

Short description:p1@Dnaja1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dnaja1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000030118, NM_008298, uc008sht.2_5end
EntrezGene:Dnaja1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dnaja1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A535.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A361.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C332.78
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.70
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E161.51
Mouse Schwann, donor1.CNhs12507.11728-123D99.62
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.08
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C512.14
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F512.36
adrenal gland, neonate N00.CNhs11191.1311-23C19.29
adrenal gland, neonate N25.CNhs11223.1377-27I313.82
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B233.38
cerebellum, neonate N30.CNhs11135.1395-42I238.33
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.24
corpora quadrigemina, adult.CNhs10501.16-22A435.05
corpus striatum, adult.CNhs10487.19-21D829.28
corpus striatum, neonate N00.CNhs11226.630-43F148.88
cortex, adult.CNhs10473.12-14D551.45
cortex, neonate N30.CNhs11107.1392-42F242.19
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B243.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C625.11
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C923.77
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C618.57
eyeball, neonate N01.CNhs11140.1532-43E723.44
eyeball, neonate N02.CNhs11205.1551-44G823.05
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E216.60
forelimb, embryo E12.CNhs10600.359-14H222.69
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I618.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I922.51
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C620.67
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E312.14
heart, neonate N03.CNhs11221.1349-25I211.35
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G18.35
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E855.31
hippocampus, neonate N00.CNhs11228.627-43G148.57
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D521.60
intestine, embryo E15.CNhs10602.976-16D810.44
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F814.85
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I213.24
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D58.85
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F816.35
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D713.79
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G218.76
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C513.75
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C234.68
medulla oblongata, neonate N30.CNhs11200.1396-42A342.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I939.52
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H716.20
ovary, neonate N00.CNhs11217.1299-22I412.38
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F413.60
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E624.31
pituitary gland, embryo E13.CNhs11009.370-44C715.91
pituitary gland, embryo E14.CNhs11037.398-44A520.15
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F622.65
pituitary gland, embryo E17.CNhs11039.1265-44F520.07
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G311.23
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C937.64
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D117.71
spleen, neonate N20.CNhs11112.824-19H119.27
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E320.25
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A96.28
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G5329.20
testis, embryo E13.CNhs11031.389-23F522.28
testis, embryo E15.CNhs11034.443-27C517.04
testis, embryo E16.CNhs11033.470-26G525.67
testis, embryo E17.CNhs11029.486-18I517.57
testis, embryo E18.CNhs11027.503-18G517.57
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I420.05
testis, neonate N10.CNhs11204.763-44D929.57
testis, neonate N20.CNhs11110.839-18H3128.04
testis, neonate N30.CNhs11130.1391-42E2197.30
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I29.14
thymus, embryo E16.CNhs11002.456-26C511.17
thymus, embryo E17.CNhs10581.478-18C110.92
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F88.53
thymus, neonate N03.CNhs11137.2104-43C710.04
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D39.14
thymus, neonate N10.CNhs11194.748-24E47.66
thymus, neonate N20.CNhs11186.820-7A29.06
thymus, neonate N25.CNhs11125.1362-25G712.12
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.80
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A265.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D779.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A461.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A548.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A757.19
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A960.06
whole body, embryo E11.CNhs11014.324-5I841.10
whole body, embryo E12.CNhs10587.857-27C929.93
whole body, embryo E13.CNhs10512.372-23H221.85
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B124.52
whole body, embryo E16.CNhs10514.453-14F215.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C610.52
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.79e-1333
neuronal stem cell1.79e-1333
neuroblast1.79e-1333
electrically signaling cell1.79e-1333
CNS neuron (sensu Vertebrata)1.48e-1223
neuroblast (sensu Vertebrata)1.48e-1223
electrically responsive cell1.48e-0939
electrically active cell1.48e-0939
neural cell4.07e-0743
ectodermal cell4.50e-0744
neurectodermal cell4.50e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm4.02e-2264
neural plate4.02e-2264
presumptive neural plate4.02e-2264
central nervous system6.37e-2273
nervous system2.15e-2175
regional part of nervous system1.30e-2054
neural tube2.10e-1952
neural rod2.10e-1952
future spinal cord2.10e-1952
neural keel2.10e-1952
structure with developmental contribution from neural crest1.96e-1892
pre-chordal neural plate3.57e-1849
ectoderm-derived structure8.80e-1895
ectoderm8.80e-1895
presumptive ectoderm8.80e-1895
ecto-epithelium3.39e-1773
brain1.14e-1647
future brain1.14e-1647
gray matter2.56e-1634
anterior neural tube3.20e-1640
regional part of brain3.91e-1646
regional part of forebrain1.01e-1539
forebrain1.01e-1539
future forebrain1.01e-1539
brain grey matter1.21e-1329
regional part of telencephalon1.21e-1329
telencephalon1.21e-1329
cerebral cortex1.62e-0921
cerebral hemisphere1.62e-0921
pallium1.62e-0921
occipital lobe8.10e-0810
visual cortex8.10e-0810
neocortex8.10e-0810
regional part of cerebral cortex1.28e-0717
embryo1.91e-07320
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