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FFCP PHASE1:Mm9::chr9:60560912..60560966,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:60560912..60560966,+
|DHSsupport=NA
|short_description=p1@Larp6
|DPIdataset=NA
|description=CAGE_peak_1_at_Larp6_5end
|association_with_transcript=0bp_to_NM_026235,uc009pzh.1_5end
|EntrezGene=67557
|EntrezGene=67557
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BN59
|UniProt=Q8BN59
|association_with_transcript=0bp_to_NM_026235,uc009pzh.1_5end
|cluster_id=chr9:60560912..60560966,+
|description=CAGE_peak_1_at_Larp6_5end
|id=chr9:60560912..60560966,+
|ontology_enrichment_celltype=CL:0000117!2.43e-09!23;CL:0000337!2.43e-09!23;CL:0000393!2.25e-08!39;CL:0000211!2.25e-08!39;CL:0000055!2.31e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-09,23;CL:0000337,1.22e-09,23;CL:0000393,1.26e-08,39;CL:0000211,1.26e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.13e-20!73;UBERON:0005743!1.13e-20!73;UBERON:0004121!3.71e-20!102;UBERON:0000924!3.71e-20!102;UBERON:0006601!3.71e-20!102;UBERON:0000073!5.75e-20!75;UBERON:0001016!5.75e-20!75;UBERON:0001049!5.97e-20!52;UBERON:0005068!5.97e-20!52;UBERON:0006241!5.97e-20!52;UBERON:0007135!5.97e-20!52;UBERON:0000033!2.89e-19!63;UBERON:0002346!7.71e-19!71;UBERON:0003075!7.71e-19!71;UBERON:0007284!7.71e-19!71;UBERON:0000955!9.67e-19!50;UBERON:0006238!9.67e-19!50;UBERON:0002616!3.36e-18!49;UBERON:0003056!9.15e-16!49;UBERON:0003080!1.97e-14!40;UBERON:0002020!3.26e-14!34;UBERON:0002780!7.26e-14!39;UBERON:0001890!7.26e-14!39;UBERON:0006240!7.26e-14!39;UBERON:0002791!3.05e-11!29;UBERON:0003528!3.05e-11!29;UBERON:0001893!3.05e-11!29;UBERON:0007811!1.65e-08!86;UBERON:0000153!2.76e-08!94;UBERON:0002619!5.57e-08!17;UBERON:0002021!1.28e-07!10;UBERON:0000411!1.28e-07!10;UBERON:0001950!1.28e-07!10;UBERON:0000956!3.65e-07!21;UBERON:0001869!3.65e-07!21;UBERON:0000203!3.65e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-23,54;UBERON:0001017,9.36e-23,73;UBERON:0001016,5.86e-22,75;UBERON:0002346,6.41e-22,64;UBERON:0003075,6.41e-22,64;UBERON:0007284,6.41e-22,64;UBERON:0001049,9.19e-22,52;UBERON:0005068,9.19e-22,52;UBERON:0006241,9.19e-22,52;UBERON:0007135,9.19e-22,52;UBERON:0004121,2.55e-21,95;UBERON:0000924,2.55e-21,95;UBERON:0006601,2.55e-21,95;UBERON:0010371,1.99e-20,73;UBERON:0000955,3.50e-18,47;UBERON:0006238,3.50e-18,47;UBERON:0002616,1.35e-17,46;UBERON:0003056,2.19e-16,49;UBERON:0003080,2.49e-15,40;UBERON:0002020,4.79e-15,34;UBERON:0002780,1.05e-14,39;UBERON:0001890,1.05e-14,39;UBERON:0006240,1.05e-14,39;UBERON:0010314,5.51e-13,92;UBERON:0003528,9.19e-12,29;UBERON:0002791,9.19e-12,29;UBERON:0001893,9.19e-12,29;UBERON:0002619,9.65e-09,17;UBERON:0002021,2.45e-08,10;UBERON:0000411,2.45e-08,10;UBERON:0001950,2.45e-08,10;UBERON:0000956,2.81e-07,21;UBERON:0001869,2.81e-07,21;UBERON:0000203,2.81e-07,21;UBERON:0003076,3.29e-07,12;UBERON:0003057,3.29e-07,12
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.69405498411945,8.11015449756117,7.34187008646726,7.82391344348039,0,1.09843091367236,1.55543919259427,4.33957907038624,0,0,0,0,4.63066984864705,5.44413535883638,3.6097046459421,8.49729135610311,11.6378015439847,5.07065122804943,8.4711133017283,8.00365316500025,1.7997994345628,0,1.4209602298922,5.09320187881288,6.53171119046643,0.414758449233911,0.945041568321835,1.05162480675691,20.5668708770739,20.0990372265968,1.5923803897944,2.20444583341944,3.67687514644008,20.9220173898839,20.0469120793745,17.9719643909805,6.85808696197008,8.96578907303615,7.8137005583514,21.7762739221077,15.1945904708554,15.4326230254578,18.2669722993674,15.0913981647049,8.20157561631323,0.227178579999552,1.43585964202892,0,0,0,0.539703191637817,0,0,2.52799956237153,0.681721290312231,0,1.7666978725517,0.845060518660083,0,0,0,0,0,0,0.5709193985953,1.8125651855302,3.41416919849097,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,1.50799909595611,0.494389935468748,2.16899035379867,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,0,14.0534782565543,15.0801628905688,0.510914110417183,0,0,0,15.4284358586967,15.5550204958333,10.6806199295935,12.6891753740362,21.9915293304084,17.6619837875626,23.3627418817571,3.97173519016234,3.73220911830279,0.758168275301024,1.05220927943237,0.910843100738926,2.5289231487682,2.16074555766419,2.56198190320716,3.6739709541717,3.58718416797579,3.18585863503078,4.39795730256327,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,1.66828349535359,1.74126083261083,3.2925141825271,1.39323986772945,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,0.877199924551994,1.97595103761946,1.61047702512446,15.5614561937454,3.91037527041281,0,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,1.4117846723634,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.228497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.58091342810643,1.62371162777562,0.784993639206874,1.48076596706161,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,2.40179147216586,0.37898282354097,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,2.39182152986231,2.13022309130459,1.72684981865896,0.578596234326046,0,0,0.983528546038072,1.93155722413313,16.5367107687426,16.5268478095006,0.655739781506702,0.757412781613119,1.89304931649754,0.390438744296638,1.07711698866399,0,0.891194696329576,0,0.404810701674894,1.75353514746787,1.58115111178609,9.63963949265421,1.84522110770749,3.20518086601059,4.23506094319298,4.12425307431339,2.65490276679926,1.45668381692989,0.604647113929502,0.565815239267694,0.885905678642318,1.53717573971964,1.80899805217755,2.54473610634254,0.356497378384721,0.632073515871632,1.05418608574999,0,7.14923172082955,1.08036656418786,2.19909762430683,1.92903331528433,2.30542303734956,3.0322698992352,2.63278432963394,5.78483403317739,3.75474732901937,1.90648863777438,0.661585194164886,3.95727007059552,2.26050197374268,0.72375509913787,1.67121281604391,1.64140899745061,1.45740418314925,15.7611506708933,0.170870880797853,0.82554747185289,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,1.25956307091292,0.829199842826543,0.954670618015114,0.632671987162271,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,0.944050424693745,1.73572257023205,0.785267825952089,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,1.55560950675238,3.22899558694328,1.520605129417,1.17357238645754,0.651021924219751,0.943734099831398,0.724752362478018,1.15212002503146,0.632022241256357,1.41907650703115,0.718976700153791,0.51968329191118,0,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.288635524920988,0.584384510907845,0.906921534460845,0,0,0,2.70465431645067,6.94425159169373,4.94509385521616,1.92931541171159,0.501572104035363,16.942555278512,17.4923589872727,20.6242384838183,12.5452823110892,22.6077231524312,17.3740596399631,20.925697507186,18.0128481289688,18.1256963593682,13.9795284172991,0.31136204275253,1.19707462020309,2.56100408631201,3.16038732188782,3.14419743941973,3.49302666055027,2.44471400581777,3.29656091582231,5.13470735346904,3.28506375292937,1.77435509923168,1.32038438970253,2.34103768674706,2.30490548657529,1.78049953762401,2.85776214769844,2.0859178670074,3.08654752741928,1.23625770240992,3.385575163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|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.69405498411945,8.11015449756117,7.34187008646726,7.82391344348039,0,1.09843091367236,1.55543919259427,4.33957907038624,0,0,0,0,4.63066984864705,5.44413535883638,3.6097046459421,8.49729135610311,11.6378015439847,5.07065122804943,8.4711133017283,8.00365316500025,1.7997994345628,0,1.4209602298922,5.09320187881288,6.53171119046643,0.414758449233911,0.945041568321835,1.05162480675691,20.5668708770739,20.0990372265968,1.5923803897944,2.20444583341944,3.67687514644008,20.9220173898839,20.0469120793745,17.9719643909805,6.85808696197008,8.96578907303615,7.8137005583514,21.7762739221077,15.1945904708554,15.4326230254578,18.2669722993674,15.0913981647049,8.20157561631323,0.227178579999552,1.43585964202892,0,0,0,0.539703191637817,0,0,2.52799956237153,0.681721290312231,0,1.7666978725517,0.845060518660083,0,0,0,0,0,0,0.5709193985953,1.8125651855302,3.41416919849097,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,1.50799909595611,0.494389935468748,2.16899035379867,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,0,14.0534782565543,15.0801628905688,0.510914110417183,0,0,0,15.4284358586967,15.5550204958333,10.6806199295935,12.6891753740362,21.9915293304084,17.6619837875626,23.3627418817571,3.97173519016234,3.73220911830279,0.758168275301024,1.05220927943237,0.910843100738926,2.5289231487682,2.16074555766419,2.56198190320716,3.6739709541717,3.58718416797579,3.18585863503078,4.39795730256327,0.215567992932842,0.567318240503458,0.351902248327898,1.53437012699302,1.66828349535359,1.74126083261083,3.2925141825271,1.39323986772945,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,0.877199924551994,1.97595103761946,1.61047702512446,15.5614561937454,3.91037527041281,0,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,1.4117846723634,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.228497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.58091342810643,1.62371162777562,0.784993639206874,1.48076596706161,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,2.40179147216586,0.37898282354097,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,2.39182152986231,2.13022309130459,1.72684981865896,0.578596234326046,0,0,0.983528546038072,1.93155722413313,16.5367107687426,16.5268478095006,0.655739781506702,0.757412781613119,1.89304931649754,0.390438744296638,1.07711698866399,0,0.891194696329576,0,0.404810701674894,1.75353514746787,1.58115111178609,9.63963949265421,1.84522110770749,3.20518086601059,4.23506094319298,4.12425307431339,2.65490276679926,1.45668381692989,0.604647113929502,0.565815239267694,0.885905678642318,1.53717573971964,1.80899805217755,2.54473610634254,0.356497378384721,0.632073515871632,1.05418608574999,0,7.14923172082955,1.08036656418786,2.19909762430683,1.92903331528433,2.30542303734956,3.0322698992352,2.63278432963394,5.78483403317739,3.75474732901937,1.90648863777438,0.661585194164886,3.95727007059552,2.26050197374268,0.72375509913787,1.67121281604391,1.64140899745061,1.45740418314925,15.7611506708933,0.170870880797853,0.82554747185289,0.185194527369712,0,0.136694227721025,0.457556346413045,0.339956859987711,1.25956307091292,0.829199842826543,0.954670618015114,0.632671987162271,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,0.944050424693745,1.73572257023205,0.785267825952089,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,1.55560950675238,3.22899558694328,1.520605129417,1.17357238645754,0.651021924219751,0.943734099831398,0.724752362478018,1.15212002503146,0.632022241256357,1.41907650703115,0.718976700153791,0.51968329191118,0,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.288635524920988,0.584384510907845,0.906921534460845,0,0,0,2.70465431645067,6.94425159169373,4.94509385521616,1.92931541171159,0.501572104035363,16.942555278512,17.4923589872727,20.6242384838183,12.5452823110892,22.6077231524312,17.3740596399631,20.925697507186,18.0128481289688,18.1256963593682,13.9795284172991,0.31136204275253,1.19707462020309,2.56100408631201,3.16038732188782,3.14419743941973,3.49302666055027,2.44471400581777,3.29656091582231,5.13470735346904,3.28506375292937,1.77435509923168,1.32038438970253,2.34103768674706,2.30490548657529,1.78049953762401,2.85776214769844,2.0859178670074,3.08654752741928,1.23625770240992,3.385575163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|short_description=p1@Larp6
}}
}}

Latest revision as of 22:56, 26 September 2015

Short description:p1@Larp6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Larp6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_026235, uc009pzh.1_5end
EntrezGene:Larp6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Larp6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.43
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D512.69
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B223.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C216.54
medulla oblongata, neonate N30.CNhs11200.1396-42A316.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C915.76
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.22e-0923
neuroblast (sensu Vertebrata)1.22e-0923
electrically responsive cell1.26e-0839
electrically active cell1.26e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.23e-2354
central nervous system9.36e-2373
nervous system5.86e-2275
neurectoderm6.41e-2264
neural plate6.41e-2264
presumptive neural plate6.41e-2264
neural tube9.19e-2252
neural rod9.19e-2252
future spinal cord9.19e-2252
neural keel9.19e-2252
ectoderm-derived structure2.55e-2195
ectoderm2.55e-2195
presumptive ectoderm2.55e-2195
ecto-epithelium1.99e-2073
brain3.50e-1847
future brain3.50e-1847
regional part of brain1.35e-1746
pre-chordal neural plate2.19e-1649
anterior neural tube2.49e-1540
gray matter4.79e-1534
regional part of forebrain1.05e-1439
forebrain1.05e-1439
future forebrain1.05e-1439
structure with developmental contribution from neural crest5.51e-1392
brain grey matter9.19e-1229
regional part of telencephalon9.19e-1229
telencephalon9.19e-1229
regional part of cerebral cortex9.65e-0917
occipital lobe2.45e-0810
visual cortex2.45e-0810
neocortex2.45e-0810
cerebral cortex2.81e-0721
cerebral hemisphere2.81e-0721
pallium2.81e-0721
posterior neural tube3.29e-0712
chordal neural plate3.29e-0712
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