Personal tools

FFCP PHASE1:Mm9::chr17:84105477..84105509,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:84105477..84105509,+
|DHSsupport=NA
|short_description=p3@Mta3
|DPIdataset=NA
|description=CAGE_peak_3_at_Mta3_5end
|association_with_transcript=0bp_to_ENSMUST00000112349,ENSMUST00000112350,ENSMUST00000112352,NM_001171052,NM_001171053,NM_001171054,NM_054082,uc008dsf.2,uc008dsg.2,uc008dsh.2,uc008dsj.2,uc012axw.1_5end
|EntrezGene=116871
|EntrezGene=116871
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9Q794,Q3U3A7,Q3UII8,Q924K8,Q6ZPV1,Q3TY62
|UniProt=E9Q794,Q3U3A7,Q3UII8,Q924K8,Q6ZPV1,Q3TY62
|association_with_transcript=0bp_to_ENSMUST00000112349,ENSMUST00000112350,ENSMUST00000112352,NM_001171052,NM_001171053,NM_001171054,NM_054082,uc008dsf.2,uc008dsg.2,uc008dsh.2,uc008dsj.2,uc012axw.1_5end
|cluster_id=chr17:84105477..84105509,+
|description=CAGE_peak_3_at_Mta3_5end
|id=chr17:84105477..84105509,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003133!2.10e-07!24;UBERON:0007811!4.43e-07!86;UBERON:0000153!6.03e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.07e-07,24
|phase1_expression=2.24208385946712,0.697950815278722,0.909998478779072,0.90739263392049,1.50268718983904,2.01455126294268,0.700837921786577,7.23090611272827,4.22366166455,3.97909694747389,1.36974374580404,3.43020283679947,4.62241970814255,6.20684857174882,4.66353666541928,2.83465374345756,4.89693314689703,4.73193248037357,5.75880621144103,3.39511721438424,3.23164502574065,4.36880185283895,5.74639536105658,1.75991665072747,3.21172993494038,1.14846392823004,1.29228598847722,1.939241094173,0.950117097281869,1.00812051903972,0.886922042621219,1.27006134691926,0.61506478758457,0,1.73310971850765,1.49611180822643,1.83752420636132,1.67412652294763,2.3440060335714,1.0470474879476,0,1.36609096991689,0.971020706062307,2.89562681343828,4.76471576731718,3.67093504323363,2.34717403304412,1.74420125104357,2.19686182734472,2.52758868796568,3.21968769738334,1.43752564364972,2.85230430298152,4.35217285206807,7.73015738027667,2.05807548828758,2.29226751951005,2.06268836910977,1.61853168687678,1.05798195854407,1.26766280701236,3.04960078862219,5.33576877666684,2.6996991518442,0.988866362566974,0.7104801149461,1.19840044207362,3.84218305321555,5.59923906465779,4.86021377994086,5.8890989178387,4.57041575046086,2.65042249141936,3.30725157880376,3.54628242767475,0.919218786610021,3.30347642998166,6.76742891851495,6.14426133024974,1.97829431595291,2.01272815925301,2.6045668527838,5.30447698102624,3.37657566019008,5.34793867218835,5.00868595305235,3.70166370077668,3.35519002485541,1.59025005999687,2.19157524309678,4.05810284182349,1.72084775396277,0,0,0,0.896053774194671,1.26399978118577,2.72688516124892,3.11743205523443,3.5333957451034,2.81686839553361,0,2.54805239706646,0,1.94841936910093,1.26679932737549,3.0331466700887,2.96878087269556,3.88406825470758,4.00793775475027,3.46970653532272,2.43572382649713,3.68984795609694,4.06951129492081,4.23319345688537,4.52399728786832,3.95511948374998,0.722996784599558,0.884610551949874,2.10296904931632,1.54589062922275,0,0,4.39171195517321,4.60782754989601,2.81002760729451,2.03685711660064,1.19980546198682,1.77898317902291,6.29120685500255,2.28750301409313,6.40837195775608,7.12679712788333,8.95004100656157,5.81806524766768,5.84068547043927,4.3790926455636,2.73695335342205,5.30717792710717,4.41927897361595,1.95180664444056,1.60931473103431,1.26043490863744,3.31550599238573,1.90502197623718,2.69038812598185,1.87403449119458,1.81092359517311,2.37124792226126,2.64748512234947,1.93546236580344,2.41115305670332,3.33656699070717,4.179025998266,2.46938563689532,4.97585667046233,0.702213187313235,0,0.568326998791185,4.97101854085205,3.04883877975425,2.34080679899319,1.42046841351126,1.77087808572663,1.85120535464854,1.39520366850245,1.60964040839772,2.80236821681207,3.78487654801005,2.79084688934462,2.10778904819225,2.04679982395465,1.97595103761946,1.20785776884335,7.99101804543684,4.93942139420565,1.65209391491899,1.32225283331772,2.77274725695804,2.78684006232526,2.19074684247559,1.4117846723634,2.44615848229357,2.47293313946327,2.84717436926707,1.15289268306808,2.01068167040216,2.18852119245266,2.33956904542944,1.79763881730844,1.29682829924817,1.7922714592893,2.65535061334314,2.51346727741403,0,0.814605311381257,2.52138233317913,4.9095073923223,2.40298841072178,3.83786384746966,1.56998727841375,2.34454611451421,0.889357881261447,6.34011401721157,4.91397487783007,2.47348323623339,3.04290182082754,3.85883455603867,3.8193877767213,2.30156909960649,3.40483976227574,3.84385978463314,2.87536413054709,4.83783231969054,1.5601883655728,2.02063102357689,1.25578189465339,1.92977408545347,0.923765950833023,1.70542270593436,3.58522948172457,2.71592137240301,2.58159273117352,3.35012514883632,3.57065461329021,4.48807390072937,3.94087860265477,1.99318220683897,3.50800491046472,1.96635977658886,2.93564469172023,5.06271705035291,3.01582567878545,0.54390568381871,2.95058563811422,5.51873492609465,5.61927064957272,5.97779601620236,4.91804836130026,1.51482556322624,0.631016438832513,0.780877488593277,3.01592756825919,0.955875191810208,1.11399337041197,1.69845918473299,2.83367491172426,1.75353514746787,2.37172666767914,4.17717711348349,3.40656204499845,4.98583690268315,5.37526965866801,2.14461159864296,0,1.94224508923985,5.74414758233027,2.26326095707078,1.77181135728464,2.45948118355142,3.35956781118687,3.99887102425256,3.92147116223193,2.21225730555071,1.05418608574999,1.03135543248187,1.36175842301515,2.34079422240703,2.71653235943784,2.57204442037911,1.95074257006501,2.49716344642899,2.46823530903181,2.43571959291679,6.57080782578389,17.7938939525609,1.32317038832977,4.28704257647848,3.87514624070173,4.34253059482722,6.08798954415996,4.92422699235184,2.33184669303881,6.30446026835733,2.22132145037209,2.68302928352189,2.96311243791539,4.52084296811258,4.51090951479383,2.74533807847827,3.90950388985867,3.77868921273877,3.17859939750175,0,2.53068794864908,2.84647253977588,2.26811215725783,1.88179466413022,1.74690050996942,2.83215127408124,3.80205896336545,1.83229159388821,2.46268449254406,3.10669656543463,3.38215763210514,7.7748603942869,7.44563207056939,5.25018208528929,6.58715099736429,5.91346439217724,6.92407708009948,8.33308063001281,5.24296722128554,3.14059357073808,3.74439008135225,3.79213344753814,4.25722952109345,3.69759445793378,3.37794139742267,3.04345382634718,4.17230845040656,4.56742708175882,4.72606486958647,4.34155734777035,5.63930369246999,5.24296162711571,5.65255708290564,5.77271049841977,6.42822961998629,1.81384306892169,13.5411431558179,13.6365062046403,14.4380770073107,4.056981474676,1.68914227906064,3.6630324853453,4.93047271881851,1.50471631210609,3.3885110557024,5.06357760157895,5.15605962095457,4.46818274093588,4.7955776383945,3.0215755895588,4.05013500139084,4.95353323546643,4.98456649882625,2.5888015587591,3.1136204275253,1.99512436700516,3.58540572083682,2.43106717068294,1.67690530102386,2.02227859295016,2.889207461421,0.618105171716683,0.962757628775446,2.27427490587418,1.52087579934144,1.69763707247469,2.90288673156635,4.03358460150676,3.61843454420364,0.952587382566147,3.24476112645595,3.08654752741928,4.12085900803307,0.735994600671987,3.08582327146874,2.12970967391205,1.90748951957857,1.74415699958794,2.35273451038327,3.29996970777538,2.74391959309159,2.10455769150274,2.98769050460896,1.68342681497322,2.13543032623513,3.05363895364247,1.22769312950907,3.56354734727722,1.54325288784913,2.24829520144151,2.10538447600868,1.71896843238639,1.91288332068843,3.08827986767322,1.15933917810211
|phase1_expression=2.24208385946712,0.697950815278722,0.909998478779072,0.90739263392049,1.50268718983904,2.01455126294268,0.700837921786577,7.23090611272827,4.22366166455,3.97909694747389,1.36974374580404,3.43020283679947,4.62241970814255,6.20684857174882,4.66353666541928,2.83465374345756,4.89693314689703,4.73193248037357,5.75880621144103,3.39511721438424,3.23164502574065,4.36880185283895,5.74639536105658,1.75991665072747,3.21172993494038,1.14846392823004,1.29228598847722,1.939241094173,0.950117097281869,1.00812051903972,0.886922042621219,1.27006134691926,0.61506478758457,0,1.73310971850765,1.49611180822643,1.83752420636132,1.67412652294763,2.3440060335714,1.0470474879476,0,1.36609096991689,0.971020706062307,2.89562681343828,4.76471576731718,3.67093504323363,2.34717403304412,1.74420125104357,2.19686182734472,2.52758868796568,3.21968769738334,1.43752564364972,2.85230430298152,4.35217285206807,7.73015738027667,2.05807548828758,2.29226751951005,2.06268836910977,1.61853168687678,1.05798195854407,1.26766280701236,3.04960078862219,5.33576877666684,2.6996991518442,0.988866362566974,0.7104801149461,1.19840044207362,3.84218305321555,5.59923906465779,4.86021377994086,5.8890989178387,4.57041575046086,2.65042249141936,3.30725157880376,3.54628242767475,0.919218786610021,3.30347642998166,6.76742891851495,6.14426133024974,1.97829431595291,2.01272815925301,2.6045668527838,5.30447698102624,3.37657566019008,5.34793867218835,5.00868595305235,3.70166370077668,3.35519002485541,1.59025005999687,2.19157524309678,4.05810284182349,1.72084775396277,0,0,0,0.896053774194671,1.26399978118577,2.72688516124892,3.11743205523443,3.5333957451034,2.81686839553361,0,2.54805239706646,0,1.94841936910093,1.26679932737549,3.0331466700887,2.96878087269556,3.88406825470758,4.00793775475027,3.46970653532272,2.43572382649713,3.68984795609694,4.06951129492081,4.23319345688537,4.52399728786832,3.95511948374998,0.722996784599558,0.884610551949874,2.10296904931632,1.54589062922275,0,0,4.39171195517321,4.60782754989601,2.81002760729451,2.03685711660064,1.19980546198682,1.77898317902291,6.29120685500255,2.28750301409313,6.40837195775608,7.12679712788333,8.95004100656157,5.81806524766768,5.84068547043927,4.3790926455636,2.73695335342205,5.30717792710717,4.41927897361595,1.95180664444056,1.60931473103431,1.26043490863744,3.31550599238573,1.90502197623718,2.69038812598185,1.87403449119458,1.81092359517311,2.37124792226126,2.64748512234947,1.93546236580344,2.41115305670332,3.33656699070717,4.179025998266,2.46938563689532,4.97585667046233,0.702213187313235,0,0.568326998791185,4.97101854085205,3.04883877975425,2.34080679899319,1.42046841351126,1.77087808572663,1.85120535464854,1.39520366850245,1.60964040839772,2.80236821681207,3.78487654801005,2.79084688934462,2.10778904819225,2.04679982395465,1.97595103761946,1.20785776884335,7.99101804543684,4.93942139420565,1.65209391491899,1.32225283331772,2.77274725695804,2.78684006232526,2.19074684247559,1.4117846723634,2.44615848229357,2.47293313946327,2.84717436926707,1.15289268306808,2.01068167040216,2.18852119245266,2.33956904542944,1.79763881730844,1.29682829924817,1.7922714592893,2.65535061334314,2.51346727741403,0,0.814605311381257,2.52138233317913,4.9095073923223,2.40298841072178,3.83786384746966,1.56998727841375,2.34454611451421,0.889357881261447,6.34011401721157,4.91397487783007,2.47348323623339,3.04290182082754,3.85883455603867,3.8193877767213,2.30156909960649,3.40483976227574,3.84385978463314,2.87536413054709,4.83783231969054,1.5601883655728,2.02063102357689,1.25578189465339,1.92977408545347,0.923765950833023,1.70542270593436,3.58522948172457,2.71592137240301,2.58159273117352,3.35012514883632,3.57065461329021,4.48807390072937,3.94087860265477,1.99318220683897,3.50800491046472,1.96635977658886,2.93564469172023,5.06271705035291,3.01582567878545,0.54390568381871,2.95058563811422,5.51873492609465,5.61927064957272,5.97779601620236,4.91804836130026,1.51482556322624,0.631016438832513,0.780877488593277,3.01592756825919,0.955875191810208,1.11399337041197,1.69845918473299,2.83367491172426,1.75353514746787,2.37172666767914,4.17717711348349,3.40656204499845,4.98583690268315,5.37526965866801,2.14461159864296,0,1.94224508923985,5.74414758233027,2.26326095707078,1.77181135728464,2.45948118355142,3.35956781118687,3.99887102425256,3.92147116223193,2.21225730555071,1.05418608574999,1.03135543248187,1.36175842301515,2.34079422240703,2.71653235943784,2.57204442037911,1.95074257006501,2.49716344642899,2.46823530903181,2.43571959291679,6.57080782578389,17.7938939525609,1.32317038832977,4.28704257647848,3.87514624070173,4.34253059482722,6.08798954415996,4.92422699235184,2.33184669303881,6.30446026835733,2.22132145037209,2.68302928352189,2.96311243791539,4.52084296811258,4.51090951479383,2.74533807847827,3.90950388985867,3.77868921273877,3.17859939750175,0,2.53068794864908,2.84647253977588,2.26811215725783,1.88179466413022,1.74690050996942,2.83215127408124,3.80205896336545,1.83229159388821,2.46268449254406,3.10669656543463,3.38215763210514,7.7748603942869,7.44563207056939,5.25018208528929,6.58715099736429,5.91346439217724,6.92407708009948,8.33308063001281,5.24296722128554,3.14059357073808,3.74439008135225,3.79213344753814,4.25722952109345,3.69759445793378,3.37794139742267,3.04345382634718,4.17230845040656,4.56742708175882,4.72606486958647,4.34155734777035,5.63930369246999,5.24296162711571,5.65255708290564,5.77271049841977,6.42822961998629,1.81384306892169,13.5411431558179,13.6365062046403,14.4380770073107,4.056981474676,1.68914227906064,3.6630324853453,4.93047271881851,1.50471631210609,3.3885110557024,5.06357760157895,5.15605962095457,4.46818274093588,4.7955776383945,3.0215755895588,4.05013500139084,4.95353323546643,4.98456649882625,2.5888015587591,3.1136204275253,1.99512436700516,3.58540572083682,2.43106717068294,1.67690530102386,2.02227859295016,2.889207461421,0.618105171716683,0.962757628775446,2.27427490587418,1.52087579934144,1.69763707247469,2.90288673156635,4.03358460150676,3.61843454420364,0.952587382566147,3.24476112645595,3.08654752741928,4.12085900803307,0.735994600671987,3.08582327146874,2.12970967391205,1.90748951957857,1.74415699958794,2.35273451038327,3.29996970777538,2.74391959309159,2.10455769150274,2.98769050460896,1.68342681497322,2.13543032623513,3.05363895364247,1.22769312950907,3.56354734727722,1.54325288784913,2.24829520144151,2.10538447600868,1.71896843238639,1.91288332068843,3.08827986767322,1.15933917810211
|short_description=p3@Mta3
}}
}}

Latest revision as of 22:51, 26 September 2015

Short description:p3@Mta3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mta3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000112349, ENSMUST00000112350, ENSMUST00000112352, NM_001171052, NM_001171053, NM_001171054, NM_054082, uc008dsf.2, uc008dsg.2, uc008dsh.2, uc008dsj.2, uc012axw.1_5end
EntrezGene:Mta3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:84105477..84105509,%2B&oldid=4278616"