FFCP PHASE1:Mm9::chr9:59598758..59598806,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:59598758..59598806,+
|short_description=p2@Myo9a
|description=CAGE_peak_2_at_Myo9a_5end
|association_with_transcript=55bp_to_ENSMUST00000128341,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=270163 | |EntrezGene=270163 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2179 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C170,D3Z3A8 | |UniProt=Q8C170,D3Z3A8 | ||
|association_with_transcript=55bp_to_ENSMUST00000128341,ENSMUST00000135298,ENSMUST00000136740_5end | |||
|cluster_id=chr9:59598758..59598806,+ | |||
|description=CAGE_peak_2_at_Myo9a_5end | |||
|id=chr9:59598758..59598806,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.38e-09!63;UBERON:0003056!2.67e-08!49;UBERON:0000153!6.79e-08!94;UBERON:0000468!9.24e-08!333;UBERON:0002346!1.05e-07!71;UBERON:0003075!1.05e-07!71;UBERON:0007284!1.05e-07!71;UBERON:0001049!1.56e-07!52;UBERON:0005068!1.56e-07!52;UBERON:0006241!1.56e-07!52;UBERON:0007135!1.56e-07!52;UBERON:0002020!3.52e-07!34;UBERON:0000955!5.50e-07!50;UBERON:0006238!5.50e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.44e-10,64;UBERON:0003075,9.44e-10,64;UBERON:0007284,9.44e-10,64;UBERON:0010371,4.01e-09,73;UBERON:0003056,2.98e-08,49;UBERON:0000073,5.62e-08,54;UBERON:0001049,1.69e-07,52;UBERON:0005068,1.69e-07,52;UBERON:0006241,1.69e-07,52;UBERON:0007135,1.69e-07,52;UBERON:0004121,2.85e-07,95;UBERON:0000924,2.85e-07,95;UBERON:0006601,2.85e-07,95;UBERON:0002020,4.00e-07,34;UBERON:0010314,6.68e-07,92 | |||
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| ||
|short_description=p2@Myo9a | |||
}} | }} |
Latest revision as of 22:45, 26 September 2015
Short description: | p2@Myo9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myo9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2179 |
Association with transcript: | 55bp_to_ENSMUST00000128341, ENSMUST00000135298, ENSMUST00000136740_5end |
EntrezGene: | Myo9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.44e-10 | 64 |
neural plate | 9.44e-10 | 64 |
presumptive neural plate | 9.44e-10 | 64 |
ecto-epithelium | 4.01e-09 | 73 |
pre-chordal neural plate | 2.98e-08 | 49 |
regional part of nervous system | 5.62e-08 | 54 |
neural tube | 1.69e-07 | 52 |
neural rod | 1.69e-07 | 52 |
future spinal cord | 1.69e-07 | 52 |
neural keel | 1.69e-07 | 52 |
ectoderm-derived structure | 2.85e-07 | 95 |
ectoderm | 2.85e-07 | 95 |
presumptive ectoderm | 2.85e-07 | 95 |
gray matter | 4.00e-07 | 34 |
structure with developmental contribution from neural crest | 6.68e-07 | 92 |