FFCP PHASE1:Mm9::chr4:3762742..3762749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67427 | |EntrezGene=67427 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=776 | |MCL_coexpression_id=776 | ||
|TSSclassifier=NA | |||
|UniProt=P60867,Q5BLK2 | |UniProt=P60867,Q5BLK2 | ||
|association_with_transcript=0bp_to_NM_026147,uc008rwn.1_5end | |association_with_transcript=0bp_to_NM_026147,uc008rwn.1_5end | ||
|cluster_id=chr4:3762742..3762749,- | |||
|description=CAGE_peak_1_at_Rps20_5end | |description=CAGE_peak_1_at_Rps20_5end | ||
|id=chr4:3762742..3762749,- | |id=chr4:3762742..3762749,- | ||
|ontology_enrichment_celltype=CL:0000144!5.92e-29!121;CL:0000012!5.92e-29!121;CL:0000548!2.04e-27!115;CL:0000004!2.04e-27!115;CL:0000255!2.04e-27!115;CL:0002371!4.81e-27!118;CL:0000034!5.31e-26!97;CL:0000723!7.78e-23!91;CL:0000048!7.78e-23!91;CL:0000219!7.88e-21!54;CL:0000063!4.37e-20!66;CL:0002320!4.00e-19!46;CL:0000134!4.00e-19!46;CL:0000988!4.00e-17!32;CL:0002032!4.00e-17!32;CL:0000037!4.00e-17!32;CL:0000566!4.00e-17!32;CL:0000837!4.00e-17!32;CL:0002031!1.71e-13!25;CL:0000049!3.18e-10!19;CL:0000738!1.09e-09!17;CL:0002087!1.09e-09!17;CL:0000763!2.74e-08!16;CL:0000838!4.03e-08!12;CL:0000542!5.11e-08!13;CL:0000051!5.11e-08!13;CL:0000084!1.61e-07!11;CL:0000827!1.61e-07!11;CL:0002321!5.72e-07!70;CL:0000220!5.72e-07!70;CL:0000839!9.41e-07!13 | |ontology_enrichment_celltype=CL:0000144!5.92e-29!121;CL:0000012!5.92e-29!121;CL:0000548!2.04e-27!115;CL:0000004!2.04e-27!115;CL:0000255!2.04e-27!115;CL:0002371!4.81e-27!118;CL:0000034!5.31e-26!97;CL:0000723!7.78e-23!91;CL:0000048!7.78e-23!91;CL:0000219!7.88e-21!54;CL:0000063!4.37e-20!66;CL:0002320!4.00e-19!46;CL:0000134!4.00e-19!46;CL:0000988!4.00e-17!32;CL:0002032!4.00e-17!32;CL:0000037!4.00e-17!32;CL:0000566!4.00e-17!32;CL:0000837!4.00e-17!32;CL:0002031!1.71e-13!25;CL:0000049!3.18e-10!19;CL:0000738!1.09e-09!17;CL:0002087!1.09e-09!17;CL:0000763!2.74e-08!16;CL:0000838!4.03e-08!12;CL:0000542!5.11e-08!13;CL:0000051!5.11e-08!13;CL:0000084!1.61e-07!11;CL:0000827!1.61e-07!11;CL:0002321!5.72e-07!70;CL:0000220!5.72e-07!70;CL:0000839!9.41e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.31e-26,97;CL:0000723,7.78e-23,91;CL:0000048,7.78e-23,91;CL:0000219,7.88e-21,54;CL:0002320,4.00e-19,46;CL:0000134,4.00e-19,46;CL:0000988,4.00e-17,32;CL:0002032,4.00e-17,32;CL:0000037,4.00e-17,32;CL:0000837,4.00e-17,32;CL:0002031,1.71e-13,25;CL:0000049,3.18e-10,19;CL:0000738,1.09e-09,17;CL:0002087,1.09e-09,17;CL:0000763,2.74e-08,16;CL:0000838,4.03e-08,12;CL:0000542,5.11e-08,13;CL:0000051,5.11e-08,13;CL:0000084,1.61e-07,11;CL:0000827,1.61e-07,11;CL:0002321,5.72e-07,70;CL:0000839,9.41e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.00e-19!46;UBERON:0002371!1.80e-08!16;UBERON:0002390!3.32e-08!45;UBERON:0003061!3.32e-08!45;UBERON:0002193!8.80e-08!48;UBERON:0002204!5.81e-07!32 | |ontology_enrichment_uberon=UBERON:0002384!4.00e-19!46;UBERON:0002371!1.80e-08!16;UBERON:0002390!3.32e-08!45;UBERON:0003061!3.32e-08!45;UBERON:0002193!8.80e-08!48;UBERON:0002204!5.81e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.00e-19,46;UBERON:0002371,1.80e-08,16;UBERON:0002390,3.32e-08,45;UBERON:0003061,3.32e-08,45;UBERON:0002193,8.80e-08,48;UBERON:0002405,8.80e-08,48;UBERON:0002204,5.81e-07,32 | |||
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| ||
|short_description=p1@Rps20 | |short_description=p1@Rps20 | ||
}} | }} |
Latest revision as of 22:41, 26 September 2015
Short description: | p1@Rps20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rps20_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_NM_026147, uc008rwn.1_5end |
EntrezGene: | Rps20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.31e-26 | 97 |
somatic stem cell | 7.78e-23 | 91 |
multi fate stem cell | 7.78e-23 | 91 |
motile cell | 7.88e-21 | 54 |
connective tissue cell | 4.00e-19 | 46 |
mesenchymal cell | 4.00e-19 | 46 |
hematopoietic cell | 4.00e-17 | 32 |
hematopoietic oligopotent progenitor cell | 4.00e-17 | 32 |
hematopoietic stem cell | 4.00e-17 | 32 |
hematopoietic multipotent progenitor cell | 4.00e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 1.71e-13 | 25 |
common myeloid progenitor | 3.18e-10 | 19 |
leukocyte | 1.09e-09 | 17 |
nongranular leukocyte | 1.09e-09 | 17 |
myeloid cell | 2.74e-08 | 16 |
lymphoid lineage restricted progenitor cell | 4.03e-08 | 12 |
lymphocyte | 5.11e-08 | 13 |
common lymphoid progenitor | 5.11e-08 | 13 |
T cell | 1.61e-07 | 11 |
pro-T cell | 1.61e-07 | 11 |
embryonic cell | 5.72e-07 | 70 |
myeloid lineage restricted progenitor cell | 9.41e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.00e-19 | 46 |
bone marrow | 1.80e-08 | 16 |
hematopoietic system | 3.32e-08 | 45 |
blood island | 3.32e-08 | 45 |
hemolymphoid system | 8.80e-08 | 48 |
immune system | 8.80e-08 | 48 |
musculoskeletal system | 5.81e-07 | 32 |