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FFCP PHASE1:Mm9::chr4:36898722..36898792,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242384
|EntrezGene=242384
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B2RQD4,Q3URE9
|UniProt=B2RQD4,Q3URE9
|association_with_transcript=0bp_to_ENSMUST00000065092,ENSMUST00000125128,ENSMUST00000145615,NM_001165999,uc008shb.2_5end
|association_with_transcript=0bp_to_ENSMUST00000065092,ENSMUST00000125128,ENSMUST00000145615,NM_001165999,uc008shb.2_5end
|cluster_id=chr4:36898722..36898792,-
|description=CAGE_peak_1_at_Lingo2_5end
|description=CAGE_peak_1_at_Lingo2_5end
|id=chr4:36898722..36898792,-
|id=chr4:36898722..36898792,-
|ontology_enrichment_celltype=CL:0000117!5.43e-14!23;CL:0000337!5.43e-14!23;CL:0000540!2.98e-10!33;CL:0000047!2.98e-10!33;CL:0000031!2.98e-10!33;CL:0000404!2.98e-10!33;CL:0000393!1.65e-07!39;CL:0000211!1.65e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.09e-18,23;CL:0000337,3.09e-18,23;CL:0000540,2.41e-11,33;CL:0000047,2.41e-11,33;CL:0000031,2.41e-11,33;CL:0000404,2.41e-11,33;CL:0000393,1.67e-08,39;CL:0000211,1.67e-08,39;CL:0002319,4.33e-07,43;CL:0000221,8.80e-07,44;CL:0000133,8.80e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.03e-24!63;UBERON:0002346!3.00e-23!71;UBERON:0003075!3.00e-23!71;UBERON:0007284!3.00e-23!71;UBERON:0001049!3.54e-23!52;UBERON:0005068!3.54e-23!52;UBERON:0006241!3.54e-23!52;UBERON:0007135!3.54e-23!52;UBERON:0000073!7.02e-22!75;UBERON:0001016!7.02e-22!75;UBERON:0003056!8.42e-22!49;UBERON:0001017!8.96e-22!73;UBERON:0005743!8.96e-22!73;UBERON:0000955!1.43e-21!50;UBERON:0006238!1.43e-21!50;UBERON:0002616!5.81e-21!49;UBERON:0002020!4.17e-20!34;UBERON:0004121!4.59e-20!102;UBERON:0000924!4.59e-20!102;UBERON:0006601!4.59e-20!102;UBERON:0003080!1.28e-18!40;UBERON:0000153!4.03e-18!94;UBERON:0002780!7.41e-18!39;UBERON:0001890!7.41e-18!39;UBERON:0006240!7.41e-18!39;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0007811!2.83e-16!86;UBERON:0000956!1.47e-11!21;UBERON:0001869!1.47e-11!21;UBERON:0000203!1.47e-11!21;UBERON:0002619!2.43e-10!17;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.52e-29,54;UBERON:0002346,1.15e-28,64;UBERON:0003075,1.15e-28,64;UBERON:0007284,1.15e-28,64;UBERON:0001049,6.20e-27,52;UBERON:0005068,6.20e-27,52;UBERON:0006241,6.20e-27,52;UBERON:0007135,6.20e-27,52;UBERON:0002020,1.38e-26,34;UBERON:0001017,6.25e-25,73;UBERON:0001016,8.23e-24,75;UBERON:0010371,4.59e-23,73;UBERON:0003056,2.24e-22,49;UBERON:0000955,6.78e-22,47;UBERON:0006238,6.78e-22,47;UBERON:0004121,1.01e-21,95;UBERON:0000924,1.01e-21,95;UBERON:0006601,1.01e-21,95;UBERON:0003528,1.64e-21,29;UBERON:0002791,1.64e-21,29;UBERON:0001893,1.64e-21,29;UBERON:0002616,4.35e-21,46;UBERON:0003080,8.02e-20,40;UBERON:0002780,8.23e-19,39;UBERON:0001890,8.23e-19,39;UBERON:0006240,8.23e-19,39;UBERON:0010314,5.48e-15,92;UBERON:0000956,2.07e-14,21;UBERON:0001869,2.07e-14,21;UBERON:0000203,2.07e-14,21;UBERON:0002619,9.13e-14,17;UBERON:0002021,8.27e-13,10;UBERON:0000411,8.27e-13,10;UBERON:0001950,8.27e-13,10;UBERON:0002420,2.37e-08,8;UBERON:0007245,2.37e-08,8;UBERON:0010009,2.37e-08,8;UBERON:0010011,2.37e-08,8;UBERON:0000454,2.37e-08,8;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0002240,2.97e-07,6;UBERON:0005174,2.97e-07,6;UBERON:0001137,2.97e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,12.6957835025288,11.4089652631112,0.338844532069132,0,0,0,0,0,0,1.97010263386108,1.08004750665353,0.420649922702764,14.2825492201902,13.4729809980484,5.75706756310284,3.73797336971122,4.5960939330501,17.6185409599022,21.9622221506523,17.3575382579555,10.0233578674947,10.7040543014819,9.89735404057844,14.7966989470732,15.1945904708554,20.4749652020926,27.6950870345248,24.7726724590439,25.1639251864156,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,33.5531032266803,17.3850229071078,11.3088916901578,31.1145533144175,41.4259040875135,18.7009240103604,26.6075671431123,0.101839363850316,0,0,2.52530227063769,0.390361328888111,1.14951052216736,0.540186389416048,1.9591626318643,3.53789795586905,4.48398020996974,3.18585863503078,5.17406741478031,0.215567992932842,0.567318240503458,0.879755620819744,1.09597866213787,1.11218899690239,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,22.5010244963616,4.6307075570678,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,1.79763881730844,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,17.5817529888305,0,0,0,0.390438744296638,1.07711698866399,0,0,0.283076530788832,0.404810701674894,0,0,6.42642632843614,0,0,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0.886701168211368,1.07021290561242,1.31639216481697,0.608929898229199,0,0,0,0,0,0.301564624640779,0.119372344003136,0,0.291480836629851,18.7279555030615,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,1.25452977608681,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0,0.428736758158132,0,38.4031252979605,44.6515479411962,40.1026859407578,34.3706364687375,53.4364365421101,50.6113911251099,54.6768225187763,48.1843687449916,38.9702471726416,40.385304316642,0.207574695168353,0.798049746802062,2.21953687480374,4.61902762429759,2.93458427679175,1.47074806760011,2.22246727801615,3.91466608753899,3.20919209591815,5.30664144703975,6.84394109703647,3.77252682772152,4.12022632867483,4.86591158277006,3.50356360629241,2.85776214769844,5.2147946675185,3.27945674788299,6.1812885120496,3.23837624295674,1.37147700954166,3.19456451086807,2.86123427936785,3.19762116591123,2.91739079287525,3.29996970777538,4.20734337607377,3.15683653725411,2.8518863907631,4.48913817326191,4.74540072496697,4.43270170690036,2.86461730218783,3.25367366490529,1.92906610981141,4.74640098082097,3.27504251823572,2.79332370262788,0.765153328275374,0.441182838239031,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,12.6957835025288,11.4089652631112,0.338844532069132,0,0,0,0,0,0,1.97010263386108,1.08004750665353,0.420649922702764,14.2825492201902,13.4729809980484,5.75706756310284,3.73797336971122,4.5960939330501,17.6185409599022,21.9622221506523,17.3575382579555,10.0233578674947,10.7040543014819,9.89735404057844,14.7966989470732,15.1945904708554,20.4749652020926,27.6950870345248,24.7726724590439,25.1639251864156,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,33.5531032266803,17.3850229071078,11.3088916901578,31.1145533144175,41.4259040875135,18.7009240103604,26.6075671431123,0.101839363850316,0,0,2.52530227063769,0.390361328888111,1.14951052216736,0.540186389416048,1.9591626318643,3.53789795586905,4.48398020996974,3.18585863503078,5.17406741478031,0.215567992932842,0.567318240503458,0.879755620819744,1.09597866213787,1.11218899690239,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,22.5010244963616,4.6307075570678,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,1.79763881730844,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,17.5817529888305,0,0,0,0.390438744296638,1.07711698866399,0,0,0.283076530788832,0.404810701674894,0,0,6.42642632843614,0,0,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0.886701168211368,1.07021290561242,1.31639216481697,0.608929898229199,0,0,0,0,0,0.301564624640779,0.119372344003136,0,0.291480836629851,18.7279555030615,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,1.25452977608681,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0,0.428736758158132,0,38.4031252979605,44.6515479411962,40.1026859407578,34.3706364687375,53.4364365421101,50.6113911251099,54.6768225187763,48.1843687449916,38.9702471726416,40.385304316642,0.207574695168353,0.798049746802062,2.21953687480374,4.61902762429759,2.93458427679175,1.47074806760011,2.22246727801615,3.91466608753899,3.20919209591815,5.30664144703975,6.84394109703647,3.77252682772152,4.12022632867483,4.86591158277006,3.50356360629241,2.85776214769844,5.2147946675185,3.27945674788299,6.1812885120496,3.23837624295674,1.37147700954166,3.19456451086807,2.86123427936785,3.19762116591123,2.91739079287525,3.29996970777538,4.20734337607377,3.15683653725411,2.8518863907631,4.48913817326191,4.74540072496697,4.43270170690036,2.86461730218783,3.25367366490529,1.92906610981141,4.74640098082097,3.27504251823572,2.79332370262788,0.765153328275374,0.441182838239031,0.695603506861264
|short_description=p1@Lingo2
|short_description=p1@Lingo2
}}
}}

Latest revision as of 22:38, 26 September 2015

Short description:p1@Lingo2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lingo2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000065092, ENSMUST00000125128, ENSMUST00000145615, NM_001165999, uc008shb.2_5end
EntrezGene:Lingo2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lingo2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A433.55
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D531.11
cortex, neonate N30.CNhs11107.1392-42F241.43
diencephalon, adult.CNhs10482.20-12F218.70
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.54
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E822.50
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A317.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A550.61
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.09e-1823
neuroblast (sensu Vertebrata)3.09e-1823
neuron2.41e-1133
neuronal stem cell2.41e-1133
neuroblast2.41e-1133
electrically signaling cell2.41e-1133
electrically responsive cell1.67e-0839
electrically active cell1.67e-0839
neural cell4.33e-0743
ectodermal cell8.80e-0744
neurectodermal cell8.80e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.52e-2954
neurectoderm1.15e-2864
neural plate1.15e-2864
presumptive neural plate1.15e-2864
neural tube6.20e-2752
neural rod6.20e-2752
future spinal cord6.20e-2752
neural keel6.20e-2752
gray matter1.38e-2634
central nervous system6.25e-2573
nervous system8.23e-2475
ecto-epithelium4.59e-2373
pre-chordal neural plate2.24e-2249
brain6.78e-2247
future brain6.78e-2247
ectoderm-derived structure1.01e-2195
ectoderm1.01e-2195
presumptive ectoderm1.01e-2195
brain grey matter1.64e-2129
regional part of telencephalon1.64e-2129
telencephalon1.64e-2129
regional part of brain4.35e-2146
anterior neural tube8.02e-2040
regional part of forebrain8.23e-1939
forebrain8.23e-1939
future forebrain8.23e-1939
structure with developmental contribution from neural crest5.48e-1592
cerebral cortex2.07e-1421
cerebral hemisphere2.07e-1421
pallium2.07e-1421
regional part of cerebral cortex9.13e-1417
occipital lobe8.27e-1310
visual cortex8.27e-1310
neocortex8.27e-1310
basal ganglion2.37e-088
nuclear complex of neuraxis2.37e-088
aggregate regional part of brain2.37e-088
collection of basal ganglia2.37e-088
cerebral subcortex2.37e-088
posterior neural tube1.33e-0712
chordal neural plate1.33e-0712
spinal cord2.97e-076
dorsal region element2.97e-076
dorsum2.97e-076
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