FFCP PHASE1:Mm9::chr11:113613127..113613163,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:113613127..113613163,-
|short_description=p2@Cdc42ep4
|description=CAGE_peak_2_at_Cdc42ep4_5end
|association_with_transcript=0bp_to_NM_001163346,uc007mfc....") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56699 | |EntrezGene=56699 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1947 | |||
|TSSclassifier=NA | |||
|UniProt=A2A6Q1,Q9JM96 | |UniProt=A2A6Q1,Q9JM96 | ||
|association_with_transcript=0bp_to_NM_001163346,uc007mfc.2_5end | |||
|cluster_id=chr11:113613127..113613163,- | |||
|description=CAGE_peak_2_at_Cdc42ep4_5end | |||
|id=chr11:113613127..113613163,- | |||
|ontology_enrichment_celltype=CL:0000221!1.30e-12!44;CL:0000133!1.30e-12!44;CL:0002319!2.44e-12!43;CL:0000055!2.69e-12!50;CL:0000117!9.02e-12!23;CL:0000337!9.02e-12!23;CL:0002321!9.46e-11!70;CL:0000220!9.46e-11!70;CL:0000393!1.69e-09!39;CL:0000211!1.69e-09!39;CL:0000540!3.33e-09!33;CL:0000047!3.33e-09!33;CL:0000031!3.33e-09!33;CL:0000404!3.33e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.30e-12,44;CL:0000133,1.30e-12,44;CL:0002319,2.43e-12,43;CL:0000117,9.02e-12,23;CL:0000337,9.02e-12,23;CL:0002321,9.31e-11,70;CL:0000393,1.69e-09,39;CL:0000211,1.69e-09,39;CL:0000540,3.33e-09,33;CL:0000047,3.33e-09,33;CL:0000031,3.33e-09,33;CL:0000404,3.33e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.51e-08!102;UBERON:0000924!9.51e-08!102;UBERON:0006601!9.51e-08!102;UBERON:0002346!1.48e-07!71;UBERON:0003075!1.48e-07!71;UBERON:0007284!1.48e-07!71;UBERON:0001017!2.04e-07!73;UBERON:0005743!2.04e-07!73;UBERON:0000073!7.53e-07!75;UBERON:0001016!7.53e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,5.79e-08,320;UBERON:0001017,2.04e-07,73;UBERON:0001016,7.53e-07,75 | |||
|phase1_expression=15.534438169165,9.42233600626275,13.6499771816861,9.0739263392049,8.5152274090879,9.06548068324205,6.30754129607919,1.93684985162364,3.801295498095,3.5109678948299,1.36974374580404,1.19658238493005,1.88320802924326,1.83582845079895,6.66219523631325,4.25198061518635,11.8925519281785,0.788655413395594,0.822686601634433,2.12194825899015,6.4632900514813,0.0992909512008853,0,4.95976510659561,5.27641346454491,6.89078356938024,3.87685796543167,7.54149314400612,6.84084310042946,7.30887376303799,4.6563407237614,1.90509202037889,4.30545351309199,0,6.93243887403059,6.4831511689812,5.71674197534634,7.53356935326434,7.813353445238,4.71171369576418,11.7646297606203,8.87959130445979,9.22469670759192,7.1761186246079,9.93493925951243,8.62669735159903,57.8969594817549,24.41881751461,15.5977189741475,16.7209713203884,25.6175151574413,30.188038516644,1.34226084846189,2.17608642603403,0.672187598284928,13.3774906738692,13.7536051170603,7.73508138416164,30.3474691289397,31.739458756322,41.1990412279016,30.4960078862219,33.7932022522233,5.39939830368839,10.8775299882367,4.2628806896766,26.664409836138,45.721978333265,26.7519199755872,37.8016627328734,31.3384192413559,14.2825492201902,20.3199057675484,28.2953746186544,27.4118047112156,59.7492211296514,15.4162233399144,9.44886301830389,8.75557239560588,32.0483679184371,29.4590212399759,26.045668527838,11.4465029590566,11.2552522006336,9.16789486660861,21.2132581541041,18.9354335462807,23.1135312823373,5.45228591998925,4.60986516651392,8.69593466105033,6.0229671388697,10.1995700056163,8.09554787456726,5.19821133958135,3.13618820968135,3.65155492342555,3.40860645156115,2.33807404142582,4.94675404314476,12.6759077799012,16.6824420638613,0,7.11066703153331,7.57718643539249,10.1343946190039,9.0994400102661,3.53970027129086,1.03575153458869,9.79718117827843,16.8280766963152,10.3518262626128,16.8349312996923,12.9621470875255,10.2302175208063,13.948991637594,12.1125534189843,2.02439099687876,5.30766331169925,5.66183974815932,3.75430581382669,3.39412677194655,1.86391761218122,8.49064311333487,5.65506108396329,4.59822699375465,4.07371423320129,3.59941638596045,4.57452817463033,3.59497534571574,7.77751024791665,20.7329680986226,3.12883776346098,5.11430914660661,4.77912502486988,4.2182728397617,13.0354385728405,6.46916247172484,10.108910337347,3.99839526184301,14.4433691688601,17.2426578325105,14.945156773844,16.1254155084215,13.8794458268709,9.22418786050918,13.2119431629218,4.9153640440413,24.1436152084783,17.5868654556072,16.1875034230833,12.2749610159442,10.2877482213471,6.61679116392116,6.37924622864625,14.52950147775,4.91549231119264,9.77922047035918,8.24074148247219,4.14251545071004,3.75241695969754,5.22179978236943,5.91861838963026,5.70616272067471,5.86215028972037,4.18561100550734,6.9751084363901,5.7215017759913,3.12663714835613,3.94001913789829,3.97237166774693,3.36259971078264,4.17145219052996,2.68412837520744,6.9395683026162,20.992540925374,6.27795687669216,2.3800550999719,14.2903127858607,13.237490296045,8.37638498593607,8.26902450955704,7.56085349072559,5.89699440948933,4.2707615539006,6.25856027951241,6.78605063760728,5.96869416123452,6.23885078781184,2.69645822596266,5.40345124686736,5.37681437786791,12.8974172648096,9.59687505921722,16.9061603509621,7.127796474586,7.75809948670503,11.7126819216832,5.69128834118316,2.95220295959204,3.61097074035162,3.45512058981041,5.03969466048153,6.50695912292767,4.32429789249047,5.62155280962134,5.47722327748958,8.20002343158217,4.58326533206556,5.4662266115654,6.16113861745134,2.74561413188081,4.31304619582064,4.46569137202204,5.92871578917665,4.54641980304801,2.69096120282868,2.41221760681684,7.944387177164,16.2962614122617,14.1779529504563,15.7862929770925,10.3263709246941,15.2430694272052,15.2347930167049,17.5620283072019,9.30047350226527,8.19419351700467,11.3212885746816,7.04612253277673,10.5337838938196,11.8612228036839,3.01582567878545,5.4390568381871,3.44234991113325,4.13905119457099,4.65596710964597,4.33683240391152,4.42624352517024,4.29200576247434,9.14973836307144,5.46614242015294,8.61693590931196,6.69112634267146,6.01556420022464,7.35998980050964,8.50102473517278,5.84511715822624,7.11518000303742,2.89189184779626,6.24536374916382,15.313641915384,15.3113741792362,9.23832688646199,1.32745138339963,9.46844481004428,8.76738315197778,6.22396763194464,9.7449624650655,6.45613810682248,5.68542244970086,5.45300594216258,6.77345018930971,1.58018378967908,2.10837217149998,5.15677716240934,5.10659408630682,11.3438489239725,15.6524007377133,14.7892554171799,11.7044554203901,13.0209236849512,12.176627524557,17.3545020995322,12.6722722354404,15.0400770313312,2.42581237860458,6.5954501176592,5.9741837877485,7.11692514152239,5.252383136138,5.74493149107714,5.82961673259701,7.04616147639937,4.44264290074417,7.84270098260245,5.92622487583077,5.46268525313604,6.42462870288818,6.86334519619568,3.73952545986482,4.19854356970974,4.14599921413271,5.72802370809068,18.0311516341247,11.1825706919767,10.8005340821801,8.99079672862215,8.73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| |phase1_expression=15.534438169165,9.42233600626275,13.6499771816861,9.0739263392049,8.5152274090879,9.06548068324205,6.30754129607919,1.93684985162364,3.801295498095,3.5109678948299,1.36974374580404,1.19658238493005,1.88320802924326,1.83582845079895,6.66219523631325,4.25198061518635,11.8925519281785,0.788655413395594,0.822686601634433,2.12194825899015,6.4632900514813,0.0992909512008853,0,4.95976510659561,5.27641346454491,6.89078356938024,3.87685796543167,7.54149314400612,6.84084310042946,7.30887376303799,4.6563407237614,1.90509202037889,4.30545351309199,0,6.93243887403059,6.4831511689812,5.71674197534634,7.53356935326434,7.813353445238,4.71171369576418,11.7646297606203,8.87959130445979,9.22469670759192,7.1761186246079,9.93493925951243,8.62669735159903,57.8969594817549,24.41881751461,15.5977189741475,16.7209713203884,25.6175151574413,30.188038516644,1.34226084846189,2.17608642603403,0.672187598284928,13.3774906738692,13.7536051170603,7.73508138416164,30.3474691289397,31.739458756322,41.1990412279016,30.4960078862219,33.7932022522233,5.39939830368839,10.8775299882367,4.2628806896766,26.664409836138,45.721978333265,26.7519199755872,37.8016627328734,31.3384192413559,14.2825492201902,20.3199057675484,28.2953746186544,27.4118047112156,59.7492211296514,15.4162233399144,9.44886301830389,8.75557239560588,32.0483679184371,29.4590212399759,26.045668527838,11.4465029590566,11.2552522006336,9.16789486660861,21.2132581541041,18.9354335462807,23.1135312823373,5.45228591998925,4.60986516651392,8.69593466105033,6.0229671388697,10.1995700056163,8.09554787456726,5.19821133958135,3.13618820968135,3.65155492342555,3.40860645156115,2.33807404142582,4.94675404314476,12.6759077799012,16.6824420638613,0,7.11066703153331,7.57718643539249,10.1343946190039,9.0994400102661,3.53970027129086,1.03575153458869,9.79718117827843,16.8280766963152,10.3518262626128,16.8349312996923,12.9621470875255,10.2302175208063,13.948991637594,12.1125534189843,2.02439099687876,5.30766331169925,5.66183974815932,3.75430581382669,3.39412677194655,1.86391761218122,8.49064311333487,5.65506108396329,4.59822699375465,4.07371423320129,3.59941638596045,4.57452817463033,3.59497534571574,7.77751024791665,20.7329680986226,3.12883776346098,5.11430914660661,4.77912502486988,4.2182728397617,13.0354385728405,6.46916247172484,10.108910337347,3.99839526184301,14.4433691688601,17.2426578325105,14.945156773844,16.1254155084215,13.8794458268709,9.22418786050918,13.2119431629218,4.9153640440413,24.1436152084783,17.5868654556072,16.1875034230833,12.2749610159442,10.2877482213471,6.61679116392116,6.37924622864625,14.52950147775,4.91549231119264,9.77922047035918,8.24074148247219,4.14251545071004,3.75241695969754,5.22179978236943,5.91861838963026,5.70616272067471,5.86215028972037,4.18561100550734,6.9751084363901,5.7215017759913,3.12663714835613,3.94001913789829,3.97237166774693,3.36259971078264,4.17145219052996,2.68412837520744,6.9395683026162,20.992540925374,6.27795687669216,2.3800550999719,14.2903127858607,13.237490296045,8.37638498593607,8.26902450955704,7.56085349072559,5.89699440948933,4.2707615539006,6.25856027951241,6.78605063760728,5.96869416123452,6.23885078781184,2.69645822596266,5.40345124686736,5.37681437786791,12.8974172648096,9.59687505921722,16.9061603509621,7.127796474586,7.75809948670503,11.7126819216832,5.69128834118316,2.95220295959204,3.61097074035162,3.45512058981041,5.03969466048153,6.50695912292767,4.32429789249047,5.62155280962134,5.47722327748958,8.20002343158217,4.58326533206556,5.4662266115654,6.16113861745134,2.74561413188081,4.31304619582064,4.46569137202204,5.92871578917665,4.54641980304801,2.69096120282868,2.41221760681684,7.944387177164,16.2962614122617,14.1779529504563,15.7862929770925,10.3263709246941,15.2430694272052,15.2347930167049,17.5620283072019,9.30047350226527,8.19419351700467,11.3212885746816,7.04612253277673,10.5337838938196,11.8612228036839,3.01582567878545,5.4390568381871,3.44234991113325,4.13905119457099,4.65596710964597,4.33683240391152,4.42624352517024,4.29200576247434,9.14973836307144,5.46614242015294,8.61693590931196,6.69112634267146,6.01556420022464,7.35998980050964,8.50102473517278,5.84511715822624,7.11518000303742,2.89189184779626,6.24536374916382,15.313641915384,15.3113741792362,9.23832688646199,1.32745138339963,9.46844481004428,8.76738315197778,6.22396763194464,9.7449624650655,6.45613810682248,5.68542244970086,5.45300594216258,6.77345018930971,1.58018378967908,2.10837217149998,5.15677716240934,5.10659408630682,11.3438489239725,15.6524007377133,14.7892554171799,11.7044554203901,13.0209236849512,12.176627524557,17.3545020995322,12.6722722354404,15.0400770313312,2.42581237860458,6.5954501176592,5.9741837877485,7.11692514152239,5.252383136138,5.74493149107714,5.82961673259701,7.04616147639937,4.44264290074417,7.84270098260245,5.92622487583077,5.46268525313604,6.42462870288818,6.86334519619568,3.73952545986482,4.19854356970974,4.14599921413271,5.72802370809068,18.0311516341247,11.1825706919767,10.8005340821801,8.99079672862215,8.73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| ||
|short_description=p2@Cdc42ep4 | |||
}} | }} |
Latest revision as of 22:27, 26 September 2015
Short description: | p2@Cdc42ep4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdc42ep4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1947 |
Association with transcript: | 0bp_to_NM_001163346, uc007mfc.2_5end |
EntrezGene: | Cdc42ep4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.30e-12 | 44 |
neurectodermal cell | 1.30e-12 | 44 |
neural cell | 2.43e-12 | 43 |
CNS neuron (sensu Vertebrata) | 9.02e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.02e-12 | 23 |
embryonic cell | 9.31e-11 | 70 |
electrically responsive cell | 1.69e-09 | 39 |
electrically active cell | 1.69e-09 | 39 |
neuron | 3.33e-09 | 33 |
neuronal stem cell | 3.33e-09 | 33 |
neuroblast | 3.33e-09 | 33 |
electrically signaling cell | 3.33e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
embryo | 5.79e-08 | 320 |
central nervous system | 2.04e-07 | 73 |
nervous system | 7.53e-07 | 75 |