FFCP PHASE1:Mm9::chr7:53652697..53652709,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:53652697..53652709,+ to FFCP PHASE1:Mm9::chr7:53652697..53652709,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16502 | |EntrezGene=16502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=E9PVV3 | |UniProt=E9PVV3 | ||
|association_with_transcript=-308bp_to_ENSMUST00000160433_5end | |||
|cluster_id=chr7:53652697..53652709,+ | |||
|description=CAGE_peak_9_at_Kcnc1_5end | |||
|id=chr7:53652697..53652709,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.68e-17!43;CL:0000540!2.98e-17!33;CL:0000047!2.98e-17!33;CL:0000031!2.98e-17!33;CL:0000404!2.98e-17!33;CL:0000221!9.82e-17!44;CL:0000133!9.82e-17!44;CL:0000117!1.08e-15!23;CL:0000337!1.08e-15!23;CL:0000055!7.78e-14!50;CL:0000393!1.29e-13!39;CL:0000211!1.29e-13!39;CL:0002321!6.89e-08!70;CL:0000220!6.89e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.62e-30,3;CL:0000117,9.52e-11,23;CL:0000337,9.52e-11,23;CL:0000540,1.60e-07,33;CL:0000047,1.60e-07,33;CL:0000031,1.60e-07,33;CL:0000404,1.60e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.02e-31!73;UBERON:0005743!2.02e-31!73;UBERON:0000073!2.98e-30!75;UBERON:0001016!2.98e-30!75;UBERON:0004121!4.96e-25!102;UBERON:0000924!4.96e-25!102;UBERON:0006601!4.96e-25!102;UBERON:0001049!2.11e-19!52;UBERON:0005068!2.11e-19!52;UBERON:0006241!2.11e-19!52;UBERON:0007135!2.11e-19!52;UBERON:0000955!2.80e-19!50;UBERON:0006238!2.80e-19!50;UBERON:0002346!4.30e-19!71;UBERON:0003075!4.30e-19!71;UBERON:0007284!4.30e-19!71;UBERON:0002616!3.78e-18!49;UBERON:0000033!2.59e-17!63;UBERON:0002020!5.96e-13!34;UBERON:0003076!4.41e-12!12;UBERON:0003057!4.41e-12!12;UBERON:0007811!2.77e-10!86;UBERON:0002298!4.40e-10!6;UBERON:0003080!4.67e-10!40;UBERON:0002791!1.92e-09!29;UBERON:0003528!1.92e-09!29;UBERON:0001893!1.92e-09!29;UBERON:0003056!3.11e-09!49;UBERON:0002780!4.17e-09!39;UBERON:0001890!4.17e-09!39;UBERON:0006240!4.17e-09!39;UBERON:0000153!1.10e-08!94;UBERON:0002950!1.77e-07!4;UBERON:0001891!1.77e-07!4;UBERON:0009616!1.77e-07!4;UBERON:0004733!6.77e-07!6;UBERON:0004732!6.77e-07!6;UBERON:0002028!6.77e-07!6;UBERON:0007277!6.77e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.62e-30,3;UBERON:0002275,3.62e-30,3;UBERON:0000073,2.23e-11,54;UBERON:0002037,5.15e-11,4;UBERON:0002680,5.15e-11,4;UBERON:0001895,5.15e-11,4;UBERON:0010092,5.15e-11,4;UBERON:0006215,5.15e-11,4;UBERON:0001374,8.99e-11,1;UBERON:0004252,8.99e-11,1;UBERON:0003663,8.99e-11,1;UBERON:0005090,8.99e-11,1;UBERON:0001630,8.99e-11,1;UBERON:0003661,8.99e-11,1;UBERON:0010890,8.99e-11,1;UBERON:0001383,8.99e-11,1;UBERON:0001017,2.45e-08,73;UBERON:0001016,4.18e-08,75;UBERON:0003076,5.25e-08,12;UBERON:0003057,5.25e-08,12;UBERON:0004733,1.21e-07,6;UBERON:0004732,1.21e-07,6;UBERON:0002028,1.21e-07,6;UBERON:0007277,1.21e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0.630974884054146,0.571301968807607,1.10434270475807,0.122490799214954,0,0,2.20231761998777,1.78762273319263,1.84327839907492,0.131886287730194,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.763991238884051,0,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,2.04946557908083,8.58731497935166,0,0,0,0,0.898743836428936,0,0.125654352112864,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,1.26235463602186,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.515559547031063,0,1.5107877947794,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0.630974884054146,0.571301968807607,1.10434270475807,0.122490799214954,0,0,2.20231761998777,1.78762273319263,1.84327839907492,0.131886287730194,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.763991238884051,0,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,2.04946557908083,8.58731497935166,0,0,0,0,0.898743836428936,0,0.125654352112864,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,1.26235463602186,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.515559547031063,0,1.5107877947794,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p9@Kcnc1 | |||
}} | }} |
Latest revision as of 22:22, 26 September 2015
Short description: | p9@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -308bp_to_ENSMUST00000160433_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.62e-30 | 3 |
CNS neuron (sensu Vertebrata) | 9.52e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.52e-11 | 23 |
neuron | 1.60e-07 | 33 |
neuronal stem cell | 1.60e-07 | 33 |
neuroblast | 1.60e-07 | 33 |
electrically signaling cell | 1.60e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.62e-30 | 3 |
reticular formation | 3.62e-30 | 3 |
regional part of nervous system | 2.23e-11 | 54 |
cerebellum | 5.15e-11 | 4 |
regional part of metencephalon | 5.15e-11 | 4 |
metencephalon | 5.15e-11 | 4 |
future metencephalon | 5.15e-11 | 4 |
rhombic lip | 5.15e-11 | 4 |
biceps femoris | 8.99e-11 | 1 |
hindlimb stylopod muscle | 8.99e-11 | 1 |
hindlimb muscle | 8.99e-11 | 1 |
muscle structure | 8.99e-11 | 1 |
muscle organ | 8.99e-11 | 1 |
limb muscle | 8.99e-11 | 1 |
pelvic complex muscle | 8.99e-11 | 1 |
muscle of leg | 8.99e-11 | 1 |
central nervous system | 2.45e-08 | 73 |
nervous system | 4.18e-08 | 75 |
posterior neural tube | 5.25e-08 | 12 |
chordal neural plate | 5.25e-08 | 12 |
segmental subdivision of hindbrain | 1.21e-07 | 6 |
segmental subdivision of nervous system | 1.21e-07 | 6 |
hindbrain | 1.21e-07 | 6 |
presumptive hindbrain | 1.21e-07 | 6 |