FFCP PHASE1:Mm9::chr7:53652532..53652571,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:53652532..53652571,+
|short_description=p10@Kcnc1
|description=CAGE_peak_10_at_Kcnc1_5end
|association_with_transcript=-446bp_to_ENSMUST00000160433_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16502 | |EntrezGene=16502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=E9PVV3 | |UniProt=E9PVV3 | ||
|association_with_transcript=-446bp_to_ENSMUST00000160433_5end | |||
|cluster_id=chr7:53652532..53652571,+ | |||
|description=CAGE_peak_10_at_Kcnc1_5end | |||
|id=chr7:53652532..53652571,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.54e-14!33;CL:0000047!9.54e-14!33;CL:0000031!9.54e-14!33;CL:0000404!9.54e-14!33;CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000393!7.26e-11!39;CL:0000211!7.26e-11!39;CL:0002319!1.26e-10!43;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0000055!1.96e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.65e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.52e-37!73;UBERON:0005743!4.52e-37!73;UBERON:0000073!8.81e-36!75;UBERON:0001016!8.81e-36!75;UBERON:0001049!6.89e-31!52;UBERON:0005068!6.89e-31!52;UBERON:0006241!6.89e-31!52;UBERON:0007135!6.89e-31!52;UBERON:0000955!1.68e-28!50;UBERON:0006238!1.68e-28!50;UBERON:0002616!3.23e-27!49;UBERON:0004121!5.93e-26!102;UBERON:0000924!5.93e-26!102;UBERON:0006601!5.93e-26!102;UBERON:0002346!1.51e-24!71;UBERON:0003075!1.51e-24!71;UBERON:0007284!1.51e-24!71;UBERON:0000033!9.54e-24!63;UBERON:0002020!4.44e-21!34;UBERON:0003080!1.73e-20!40;UBERON:0002780!3.84e-19!39;UBERON:0001890!3.84e-19!39;UBERON:0006240!3.84e-19!39;UBERON:0003056!2.69e-18!49;UBERON:0002791!6.91e-17!29;UBERON:0003528!6.91e-17!29;UBERON:0001893!6.91e-17!29;UBERON:0007811!6.21e-15!86;UBERON:0000956!5.25e-13!21;UBERON:0001869!5.25e-13!21;UBERON:0000203!5.25e-13!21;UBERON:0000153!6.75e-13!94;UBERON:0002021!5.33e-11!10;UBERON:0000411!5.33e-11!10;UBERON:0001950!5.33e-11!10;UBERON:0003076!5.34e-11!12;UBERON:0003057!5.34e-11!12;UBERON:0002619!1.30e-10!17;UBERON:0000025!3.78e-09!114;UBERON:0004111!9.00e-09!122;UBERON:0002298!1.29e-07!6;UBERON:0002240!4.24e-07!6;UBERON:0005174!4.24e-07!6;UBERON:0001137!4.24e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.65e-14,3;UBERON:0002275,6.65e-14,3;UBERON:0002037,4.60e-11,4;UBERON:0002680,4.60e-11,4;UBERON:0001895,4.60e-11,4;UBERON:0010092,4.60e-11,4;UBERON:0006215,4.60e-11,4;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0000073,8.80e-09,54;UBERON:0003076,4.70e-08,12;UBERON:0003057,4.70e-08,12;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0004733,1.12e-07,6;UBERON:0004732,1.12e-07,6;UBERON:0002028,1.12e-07,6;UBERON:0007277,1.12e-07,6;UBERON:0001049,9.20e-07,52;UBERON:0005068,9.20e-07,52;UBERON:0006241,9.20e-07,52;UBERON:0007135,9.20e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.420649922702764,0,0.220868540951614,0,0.191690942036473,0,0,1.53224805702225,1.68967186581868,0.263772575460388,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0.589257170947335,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,11.51956887474,0,0,0,0,0.748953197024114,0.915001205637253,0,0.173824320192276,0.255715457330331,1.66230435647648,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0.920650473014354,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,0,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.420649922702764,0,0.220868540951614,0,0.191690942036473,0,0,1.53224805702225,1.68967186581868,0.263772575460388,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0.589257170947335,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,11.51956887474,0,0,0,0,0.748953197024114,0.915001205637253,0,0.173824320192276,0.255715457330331,1.66230435647648,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0.920650473014354,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,0,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p10@Kcnc1 | |||
}} | }} |
Latest revision as of 22:22, 26 September 2015
Short description: | p10@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -446bp_to_ENSMUST00000160433_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.65e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.65e-14 | 3 |
reticular formation | 6.65e-14 | 3 |
cerebellum | 4.60e-11 | 4 |
regional part of metencephalon | 4.60e-11 | 4 |
metencephalon | 4.60e-11 | 4 |
future metencephalon | 4.60e-11 | 4 |
rhombic lip | 4.60e-11 | 4 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
regional part of nervous system | 8.80e-09 | 54 |
posterior neural tube | 4.70e-08 | 12 |
chordal neural plate | 4.70e-08 | 12 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
segmental subdivision of hindbrain | 1.12e-07 | 6 |
segmental subdivision of nervous system | 1.12e-07 | 6 |
hindbrain | 1.12e-07 | 6 |
presumptive hindbrain | 1.12e-07 | 6 |
neural tube | 9.20e-07 | 52 |
neural rod | 9.20e-07 | 52 |
future spinal cord | 9.20e-07 | 52 |
neural keel | 9.20e-07 | 52 |