FFCP PHASE1:Mm9::chr7:53652251..53652264,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16502 | |EntrezGene=16502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | |UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | ||
|association_with_transcript=384bp_to_ENSMUST00000025202,NM_001112739_5end | |association_with_transcript=384bp_to_ENSMUST00000025202,NM_001112739_5end | ||
|cluster_id=chr7:53652251..53652264,+ | |||
|description=CAGE_peak_8_at_Kcnc1_5end | |description=CAGE_peak_8_at_Kcnc1_5end | ||
|id=chr7:53652251..53652264,+ | |id=chr7:53652251..53652264,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.73e-10!33;CL:0000047!7.73e-10!33;CL:0000031!7.73e-10!33;CL:0000404!7.73e-10!33;CL:0000117!7.46e-09!23;CL:0000337!7.46e-09!23;CL:0000393!1.15e-07!39;CL:0000211!1.15e-07!39;CL:0002319!1.63e-07!43;CL:0000221!3.03e-07!44;CL:0000133!3.03e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.04e-15,3;CL:0000117,4.88e-08,23;CL:0000337,4.88e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.01e-24!73;UBERON:0005743!7.01e-24!73;UBERON:0001049!4.95e-23!52;UBERON:0005068!4.95e-23!52;UBERON:0006241!4.95e-23!52;UBERON:0007135!4.95e-23!52;UBERON:0000073!5.85e-23!75;UBERON:0001016!5.85e-23!75;UBERON:0004121!4.81e-22!102;UBERON:0000924!4.81e-22!102;UBERON:0006601!4.81e-22!102;UBERON:0000955!4.77e-21!50;UBERON:0006238!4.77e-21!50;UBERON:0002346!6.49e-21!71;UBERON:0003075!6.49e-21!71;UBERON:0007284!6.49e-21!71;UBERON:0000033!1.59e-20!63;UBERON:0002616!6.21e-20!49;UBERON:0002020!3.03e-17!34;UBERON:0003080!4.62e-14!40;UBERON:0003056!5.58e-14!49;UBERON:0002791!1.95e-13!29;UBERON:0003528!1.95e-13!29;UBERON:0001893!1.95e-13!29;UBERON:0002780!6.10e-13!39;UBERON:0001890!6.10e-13!39;UBERON:0006240!6.10e-13!39;UBERON:0007811!1.42e-12!86;UBERON:0000153!9.48e-11!94;UBERON:0003076!2.45e-10!12;UBERON:0003057!2.45e-10!12;UBERON:0000956!9.94e-10!21;UBERON:0001869!9.94e-10!21;UBERON:0000203!9.94e-10!21;UBERON:0002298!1.08e-07!6;UBERON:0002619!1.33e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.04e-15,3;UBERON:0002275,1.04e-15,3;UBERON:0000073,5.97e-13,54;UBERON:0002037,5.57e-12,4;UBERON:0002680,5.57e-12,4;UBERON:0001895,5.57e-12,4;UBERON:0010092,5.57e-12,4;UBERON:0006215,5.57e-12,4;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0003076,8.07e-09,12;UBERON:0003057,8.07e-09,12;UBERON:0004733,2.66e-08,6;UBERON:0004732,2.66e-08,6;UBERON:0002028,2.66e-08,6;UBERON:0007277,2.66e-08,6;UBERON:0001049,1.26e-07,52;UBERON:0005068,1.26e-07,52;UBERON:0006241,1.26e-07,52;UBERON:0007135,1.26e-07,52;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,0,1.40456071893706,1.84327839907492,0.131886287730194,0.182975287204819,0,1.67509799400829,0,0.916789486660861,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,13.1951425292477,0,0,0,0,0.748953197024114,0.915001205637253,0,0.173824320192276,0.255715457330331,1.45451631191692,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,0,1.40456071893706,1.84327839907492,0.131886287730194,0.182975287204819,0,1.67509799400829,0,0.916789486660861,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,13.1951425292477,0,0,0,0,0.748953197024114,0.915001205637253,0,0.173824320192276,0.255715457330331,1.45451631191692,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p8@Kcnc1 | |short_description=p8@Kcnc1 | ||
}} | }} |
Latest revision as of 22:21, 26 September 2015
Short description: | p8@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 384bp_to_ENSMUST00000025202, NM_001112739_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.04e-15 | 3 |
CNS neuron (sensu Vertebrata) | 4.88e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.88e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.04e-15 | 3 |
reticular formation | 1.04e-15 | 3 |
regional part of nervous system | 5.97e-13 | 54 |
cerebellum | 5.57e-12 | 4 |
regional part of metencephalon | 5.57e-12 | 4 |
metencephalon | 5.57e-12 | 4 |
future metencephalon | 5.57e-12 | 4 |
rhombic lip | 5.57e-12 | 4 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
posterior neural tube | 8.07e-09 | 12 |
chordal neural plate | 8.07e-09 | 12 |
segmental subdivision of hindbrain | 2.66e-08 | 6 |
segmental subdivision of nervous system | 2.66e-08 | 6 |
hindbrain | 2.66e-08 | 6 |
presumptive hindbrain | 2.66e-08 | 6 |
neural tube | 1.26e-07 | 52 |
neural rod | 1.26e-07 | 52 |
future spinal cord | 1.26e-07 | 52 |
neural keel | 1.26e-07 | 52 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |