FFCP PHASE1:Mm9::chr2:71205830..71205854,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:71205830..71205854,-
|short_description=p3@Slc25a12
|description=CAGE_peak_3_at_Slc25a12_5end
|association_with_transcript=-24bp_to_ENSMUST00000151937_5end...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78830 | |EntrezGene=78830 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BH59 | |UniProt=Q8BH59 | ||
|association_with_transcript=-24bp_to_ENSMUST00000151937_5end | |||
|cluster_id=chr2:71205830..71205854,- | |||
|description=CAGE_peak_3_at_Slc25a12_5end | |||
|id=chr2:71205830..71205854,- | |||
|ontology_enrichment_celltype=CL:0000393!2.29e-12!39;CL:0000211!2.29e-12!39;CL:0000540!2.07e-11!33;CL:0000047!2.07e-11!33;CL:0000031!2.07e-11!33;CL:0000404!2.07e-11!33;CL:0000221!4.67e-11!44;CL:0000133!4.67e-11!44;CL:0000055!6.14e-11!50;CL:0002319!9.80e-11!43;CL:0000117!4.22e-08!23;CL:0000337!4.22e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.05e-13,39;CL:0000211,7.05e-13,39;CL:0000540,7.26e-12,33;CL:0000047,7.26e-12,33;CL:0000031,7.26e-12,33;CL:0000404,7.26e-12,33;CL:0000221,2.94e-11,44;CL:0000133,2.94e-11,44;CL:0002319,6.40e-11,43;CL:0000117,2.26e-08,23;CL:0000337,2.26e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.09e-15!102;UBERON:0000924!9.09e-15!102;UBERON:0006601!9.09e-15!102;UBERON:0001017!2.01e-14!73;UBERON:0005743!2.01e-14!73;UBERON:0000073!4.08e-14!75;UBERON:0001016!4.08e-14!75;UBERON:0002346!1.90e-10!71;UBERON:0003075!1.90e-10!71;UBERON:0007284!1.90e-10!71;UBERON:0000033!2.74e-09!63;UBERON:0001049!4.18e-09!52;UBERON:0005068!4.18e-09!52;UBERON:0006241!4.18e-09!52;UBERON:0007135!4.18e-09!52;UBERON:0000955!3.24e-08!50;UBERON:0006238!3.24e-08!50;UBERON:0002616!8.05e-08!49;UBERON:0002020!1.91e-07!34;UBERON:0000489!5.39e-07!21;UBERON:0000475!6.03e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-14,73;UBERON:0001016,3.33e-14,75;UBERON:0004121,4.05e-14,95;UBERON:0000924,4.05e-14,95;UBERON:0006601,4.05e-14,95;UBERON:0010314,1.80e-10,92;UBERON:0000073,7.14e-10,54;UBERON:0010371,7.92e-10,73;UBERON:0002346,1.01e-09,64;UBERON:0003075,1.01e-09,64;UBERON:0007284,1.01e-09,64;UBERON:0001049,5.04e-09,52;UBERON:0005068,5.04e-09,52;UBERON:0006241,5.04e-09,52;UBERON:0007135,5.04e-09,52;UBERON:0002020,9.83e-08,34;UBERON:0000489,2.91e-07,21;UBERON:0000955,6.02e-07,47;UBERON:0006238,6.02e-07,47 | |||
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| ||
|short_description=p3@Slc25a12 | |||
}} | }} |
Latest revision as of 22:19, 26 September 2015
Short description: | p3@Slc25a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc25a12_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENSMUST00000151937_5end |
EntrezGene: | Slc25a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.05e-13 | 39 |
electrically active cell | 7.05e-13 | 39 |
neuron | 7.26e-12 | 33 |
neuronal stem cell | 7.26e-12 | 33 |
neuroblast | 7.26e-12 | 33 |
electrically signaling cell | 7.26e-12 | 33 |
ectodermal cell | 2.94e-11 | 44 |
neurectodermal cell | 2.94e-11 | 44 |
neural cell | 6.40e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.63e-14 | 73 |
nervous system | 3.33e-14 | 75 |
ectoderm-derived structure | 4.05e-14 | 95 |
ectoderm | 4.05e-14 | 95 |
presumptive ectoderm | 4.05e-14 | 95 |
structure with developmental contribution from neural crest | 1.80e-10 | 92 |
regional part of nervous system | 7.14e-10 | 54 |
ecto-epithelium | 7.92e-10 | 73 |
neurectoderm | 1.01e-09 | 64 |
neural plate | 1.01e-09 | 64 |
presumptive neural plate | 1.01e-09 | 64 |
neural tube | 5.04e-09 | 52 |
neural rod | 5.04e-09 | 52 |
future spinal cord | 5.04e-09 | 52 |
neural keel | 5.04e-09 | 52 |
gray matter | 9.83e-08 | 34 |
cavitated compound organ | 2.91e-07 | 21 |
brain | 6.02e-07 | 47 |
future brain | 6.02e-07 | 47 |