FFCP PHASE1:Mm9::chr9:58335923..58335939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319477 | |EntrezGene=319477 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CD60 | |UniProt=Q8CD60 | ||
|association_with_transcript=-470bp_to_NM_176921,uc009pwz.1_5end | |association_with_transcript=-470bp_to_NM_176921,uc009pwz.1_5end | ||
|cluster_id=chr9:58335923..58335939,+ | |||
|description=CAGE_peak_3_at_6030419C18Rik_5end | |description=CAGE_peak_3_at_6030419C18Rik_5end | ||
|id=chr9:58335923..58335939,+ | |id=chr9:58335923..58335939,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000221!3.28e-11!44;CL:0000133!3.28e-11!44;CL:0002319!6.56e-11!43;CL:0000055!8.15e-10!50;CL:0000540!3.46e-09!33;CL:0000047!3.46e-09!33;CL:0000031!3.46e-09!33;CL:0000404!3.46e-09!33;CL:0000393!1.00e-08!39;CL:0000211!1.00e-08!39 | |ontology_enrichment_celltype=CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000221!3.28e-11!44;CL:0000133!3.28e-11!44;CL:0002319!6.56e-11!43;CL:0000055!8.15e-10!50;CL:0000540!3.46e-09!33;CL:0000047!3.46e-09!33;CL:0000031!3.46e-09!33;CL:0000404!3.46e-09!33;CL:0000393!1.00e-08!39;CL:0000211!1.00e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-14,23;CL:0000337,2.38e-14,23;CL:0000221,3.82e-12,44;CL:0000133,3.82e-12,44;CL:0002319,8.67e-12,43;CL:0000540,2.10e-09,33;CL:0000047,2.10e-09,33;CL:0000031,2.10e-09,33;CL:0000404,2.10e-09,33;CL:0000393,4.69e-09,39;CL:0000211,4.69e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.11e-27!75;UBERON:0001016!1.11e-27!75;UBERON:0001017!2.24e-27!73;UBERON:0005743!2.24e-27!73;UBERON:0004121!2.04e-26!102;UBERON:0000924!2.04e-26!102;UBERON:0006601!2.04e-26!102;UBERON:0001049!3.33e-26!52;UBERON:0005068!3.33e-26!52;UBERON:0006241!3.33e-26!52;UBERON:0007135!3.33e-26!52;UBERON:0000033!1.73e-25!63;UBERON:0000955!2.09e-25!50;UBERON:0006238!2.09e-25!50;UBERON:0002346!6.32e-25!71;UBERON:0003075!6.32e-25!71;UBERON:0007284!6.32e-25!71;UBERON:0002616!1.26e-24!49;UBERON:0003080!2.50e-19!40;UBERON:0002020!3.78e-19!34;UBERON:0002780!1.05e-18!39;UBERON:0001890!1.05e-18!39;UBERON:0006240!1.05e-18!39;UBERON:0003056!1.26e-18!49;UBERON:0002791!2.97e-16!29;UBERON:0003528!2.97e-16!29;UBERON:0001893!2.97e-16!29;UBERON:0000153!6.81e-13!94;UBERON:0007811!1.31e-12!86;UBERON:0000956!3.46e-12!21;UBERON:0001869!3.46e-12!21;UBERON:0000203!3.46e-12!21;UBERON:0004111!1.62e-11!122;UBERON:0000025!7.93e-11!114;UBERON:0002619!2.72e-10!17;UBERON:0002021!7.06e-08!10;UBERON:0000411!7.06e-08!10;UBERON:0001950!7.06e-08!10;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.11e-27!75;UBERON:0001016!1.11e-27!75;UBERON:0001017!2.24e-27!73;UBERON:0005743!2.24e-27!73;UBERON:0004121!2.04e-26!102;UBERON:0000924!2.04e-26!102;UBERON:0006601!2.04e-26!102;UBERON:0001049!3.33e-26!52;UBERON:0005068!3.33e-26!52;UBERON:0006241!3.33e-26!52;UBERON:0007135!3.33e-26!52;UBERON:0000033!1.73e-25!63;UBERON:0000955!2.09e-25!50;UBERON:0006238!2.09e-25!50;UBERON:0002346!6.32e-25!71;UBERON:0003075!6.32e-25!71;UBERON:0007284!6.32e-25!71;UBERON:0002616!1.26e-24!49;UBERON:0003080!2.50e-19!40;UBERON:0002020!3.78e-19!34;UBERON:0002780!1.05e-18!39;UBERON:0001890!1.05e-18!39;UBERON:0006240!1.05e-18!39;UBERON:0003056!1.26e-18!49;UBERON:0002791!2.97e-16!29;UBERON:0003528!2.97e-16!29;UBERON:0001893!2.97e-16!29;UBERON:0000153!6.81e-13!94;UBERON:0007811!1.31e-12!86;UBERON:0000956!3.46e-12!21;UBERON:0001869!3.46e-12!21;UBERON:0000203!3.46e-12!21;UBERON:0004111!1.62e-11!122;UBERON:0000025!7.93e-11!114;UBERON:0002619!2.72e-10!17;UBERON:0002021!7.06e-08!10;UBERON:0000411!7.06e-08!10;UBERON:0001950!7.06e-08!10;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.27e-32,54;UBERON:0001016,1.43e-30,75;UBERON:0001017,3.39e-30,73;UBERON:0001049,5.60e-30,52;UBERON:0005068,5.60e-30,52;UBERON:0006241,5.60e-30,52;UBERON:0007135,5.60e-30,52;UBERON:0004121,1.61e-27,95;UBERON:0000924,1.61e-27,95;UBERON:0006601,1.61e-27,95;UBERON:0002346,1.33e-26,64;UBERON:0003075,1.33e-26,64;UBERON:0007284,1.33e-26,64;UBERON:0000955,1.71e-26,47;UBERON:0006238,1.71e-26,47;UBERON:0010371,1.36e-25,73;UBERON:0002616,1.38e-25,46;UBERON:0002020,1.08e-22,34;UBERON:0010314,1.61e-22,92;UBERON:0003080,9.08e-22,40;UBERON:0002780,5.03e-21,39;UBERON:0001890,5.03e-21,39;UBERON:0006240,5.03e-21,39;UBERON:0003056,5.39e-20,49;UBERON:0003528,3.28e-19,29;UBERON:0002791,3.28e-19,29;UBERON:0001893,3.28e-19,29;UBERON:0000956,2.53e-14,21;UBERON:0001869,2.53e-14,21;UBERON:0000203,2.53e-14,21;UBERON:0002619,4.77e-12,17;UBERON:0004111,7.13e-12,122;UBERON:0000025,1.86e-11,114;UBERON:0002021,3.77e-09,10;UBERON:0000411,3.77e-09,10;UBERON:0001950,3.77e-09,10;UBERON:0003076,1.42e-08,12;UBERON:0003057,1.42e-08,12 | |||
|phase1_expression=5.44506080156299,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0.297872853602656,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,2.63580021170738,2.0190142737785,2.34717403304412,2.8343270329458,2.85592037554813,2.52758868796568,1.1198913730029,0,0,0,0,0.514518872071894,1.43266719969378,0,3.23706337375356,4.7609188134483,3.80298842103708,2.03306719241479,0,0,2.96659908770092,0.7104801149461,5.09320187881288,4.2264013585371,5.28817022773236,4.05017814995072,2.73422449756797,10.8547374073445,5.74258206474195,3.30725157880376,1.53352753629178,2.75765635983006,12.1127469099328,8.04430229936683,10.4452442614246,3.82470234417562,2.74462930807229,2.6045668527838,9.21303896704557,6.75315132038016,7.02871939773326,5.30331453852602,4.9830088279686,6.15118171223492,1.13589289999776,1.96486056277642,0,0,0,0,0,0,0.702222100658759,2.04516387093669,1.03914401841148,2.82671659608272,2.25349471642689,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,0,0.593768556259299,1.56136794089522,0.608930956624282,1.61430848079241,0.904335843315735,1.29347577849275,1.75933227861546,0.494389935468748,0.722996784599558,0,1.45590164952668,0.441683036920787,0.484875253135222,0,7.02673912827713,10.4723353406728,0.255457055208591,0,0,0,7.78911324905078,9.60751265919116,4.77486538028885,8.51739168942155,15.0872119824895,6.44142938134636,11.6813709408785,2.34230536855727,1.11966273549084,0.252722758433675,1.05220927943237,1.69156575851515,1.14951052216736,0.720248519221397,1.05493372485001,1.56483948048054,0.896796041993948,1.03071897015702,1.55222022443409,0.646703978798527,1.32374256117473,1.75951124163949,1.7535658594206,0.556094498451196,1.74126083261083,2.05782136407943,1.19420560091096,0,0,0,1.03562886267751,0.938104239924385,0.36012412292203,0.946978942340841,0.393528463494808,0.925602677324269,1.16266972375204,0.536546802799238,0.817357396570186,1.6455984991348,0.985004784474571,2.99954595319666,2.33919979880532,1.75640092232841,2.28150911892632,11.9865270681553,3.08713837137853,0,0.264450566663544,0.639864751605702,1.39342003116263,0.77320476793256,0.80673409849337,0,0.190225626112559,1.42358718463353,0.658795818896044,0.251335208800269,0.994782360205754,0.58489226135736,0.898819408654221,0,0.398282546508734,2.27601481143698,0.913988100877831,2.25415471346161,1.4255592949172,0.775809948670503,1.33258057791605,0.569128834118316,0.147610147979602,0,0.123397163921801,0,0.667380422864376,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.923765950833023,0.947457058852424,0.325929952884052,0.678980343100753,0.469380496577004,1.34005005953453,0.476087281772027,0.975668239288994,1.57635144106191,1.32878813789265,1.43509291791738,1.14704320301017,1.55416483679306,1.15719246865209,0,0,0,0.275936746304732,5.77982123956051,4.57125577709592,2.62295912602681,1.26235463602186,0.94652465824877,1.56175497718655,0.646270193198397,1.19484398976276,0.445597348164788,0.849229592366497,0.404810701674894,0.292255857911312,0,14.7807805554031,1.41940085208269,3.02711526234334,4.23506094319298,2.14461159864296,0,0.971122544619926,1.209294227859,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0,0.632073515871632,0,0,3.06395645178409,0.720244376125241,0.776152102696527,1.50035924522115,4.07882537377229,3.21063871683727,1.97458824722545,2.74018454203139,0,1.90648863777438,0.441056796109924,1.15420377059036,1.13025098687134,1.26657142349127,1.3130957840345,0.328281799490123,0,5.00648315428376,0,1.65109494370578,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.949007980743406,0.406638934253697,0.540026704109006,0.418176592028937,0.218362563746178,0.404593039154462,1.07449492442937,0.523511883968059,0.259229946583586,0.621339313086926,0,0.897099276263873,0.827292452285488,1.16670713006429,1.16243841129958,1.18269287843545,1.87771581833206,0.5208175393758,0.104859344425711,0,0.576060012515731,0,0.608175645870493,0.102710957164827,0.25984164595559,0.537080087002444,0.596044064343795,0.360586348559907,0.147689527174577,0,0.228620419965,0.201652370273681,0.194915761479505,0.288635524920988,0.116876902181569,1.81384306892169,1.10992976687032,0.448569283047378,0.167884616364078,0.386379188064381,1.12609485270709,2.38097111547445,1.07184189539533,1.50471631210609,12.4245405375755,12.889106622201,8.02053718815155,10.6548973053086,13.0165678756422,15.107877947794,6.75022500231806,10.8077088773813,11.7817026335893,9.31968561153276,0.415149390336707,1.19707462020309,1.87806966329548,0.486213434136588,0.628839487883947,1.10306105070008,1.33348036680969,1.03017528619447,3.53011130550997,1.26348605881899,1.2673964994512,0.754505365544305,0.561849044819294,1.47257850531199,1.09127391015665,0.476293691283074,1.62238056322798,1.54327376370964,0.824171801606613,1.32479028120958,1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|short_description=p3@6030419C18Rik | |short_description=p3@6030419C18Rik | ||
}} | }} |
Latest revision as of 22:18, 26 September 2015
Short description: | p3@6030419C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_6030419C18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -470bp_to_NM_176921, uc009pwz.1_5end |
EntrezGene: | 6030419C18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-14 | 23 |
ectodermal cell | 3.82e-12 | 44 |
neurectodermal cell | 3.82e-12 | 44 |
neural cell | 8.67e-12 | 43 |
neuron | 2.10e-09 | 33 |
neuronal stem cell | 2.10e-09 | 33 |
neuroblast | 2.10e-09 | 33 |
electrically signaling cell | 2.10e-09 | 33 |
electrically responsive cell | 4.69e-09 | 39 |
electrically active cell | 4.69e-09 | 39 |