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FFCP PHASE1:Mm9::chr7:53356097..53356140,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:53356097..53356140,-
|DHSsupport=NA
|short_description=p1@Kcnj11
|DPIdataset=NA
|description=CAGE_peak_1_at_Kcnj11_5end
|association_with_transcript=0bp_to_NM_001204411_5end
|EntrezGene=16514
|EntrezGene=16514
|HGNC=
|HGNC=
|MCL_coexpression_id=3631
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_NM_001204411_5end
|cluster_id=chr7:53356097..53356140,-
|description=CAGE_peak_1_at_Kcnj11_5end
|id=chr7:53356097..53356140,-
|ontology_enrichment_celltype=CL:0000117!6.21e-12!23;CL:0000337!6.21e-12!23;CL:0000540!3.79e-07!33;CL:0000047!3.79e-07!33;CL:0000031!3.79e-07!33;CL:0000404!3.79e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.19e-16,23;CL:0000337,2.19e-16,23;CL:0000540,6.57e-10,33;CL:0000047,6.57e-10,33;CL:0000031,6.57e-10,33;CL:0000404,6.57e-10,33;CL:0000393,2.98e-07,39;CL:0000211,2.98e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.21e-23!63;UBERON:0001049!5.63e-22!52;UBERON:0005068!5.63e-22!52;UBERON:0006241!5.63e-22!52;UBERON:0007135!5.63e-22!52;UBERON:0000955!1.05e-21!50;UBERON:0006238!1.05e-21!50;UBERON:0002616!4.61e-21!49;UBERON:0003056!1.28e-19!49;UBERON:0002346!8.79e-19!71;UBERON:0003075!8.79e-19!71;UBERON:0007284!8.79e-19!71;UBERON:0001017!1.58e-18!73;UBERON:0005743!1.58e-18!73;UBERON:0003080!2.42e-18!40;UBERON:0002780!9.96e-18!39;UBERON:0001890!9.96e-18!39;UBERON:0006240!9.96e-18!39;UBERON:0000073!3.45e-17!75;UBERON:0001016!3.45e-17!75;UBERON:0002020!3.10e-16!34;UBERON:0004121!1.94e-14!102;UBERON:0000924!1.94e-14!102;UBERON:0006601!1.94e-14!102;UBERON:0002791!4.04e-14!29;UBERON:0003528!4.04e-14!29;UBERON:0001893!4.04e-14!29;UBERON:0000025!8.80e-12!114;UBERON:0007811!7.75e-11!86;UBERON:0004111!1.45e-10!122;UBERON:0000956!2.71e-10!21;UBERON:0001869!2.71e-10!21;UBERON:0000203!2.71e-10!21;UBERON:0000153!9.36e-09!94;UBERON:0002619!1.32e-07!17;UBERON:0002021!2.15e-07!10;UBERON:0000411!2.15e-07!10;UBERON:0001950!2.15e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.19e-34,92;UBERON:0000073,1.23e-33,54;UBERON:0001049,1.39e-31,52;UBERON:0005068,1.39e-31,52;UBERON:0006241,1.39e-31,52;UBERON:0007135,1.39e-31,52;UBERON:0002346,2.21e-28,64;UBERON:0003075,2.21e-28,64;UBERON:0007284,2.21e-28,64;UBERON:0000955,2.29e-28,47;UBERON:0006238,2.29e-28,47;UBERON:0001017,1.62e-27,73;UBERON:0002616,1.85e-27,46;UBERON:0001016,3.03e-26,75;UBERON:0003080,1.96e-25,40;UBERON:0010371,1.35e-24,73;UBERON:0002780,1.48e-24,39;UBERON:0001890,1.48e-24,39;UBERON:0006240,1.48e-24,39;UBERON:0003056,2.43e-24,49;UBERON:0002020,1.67e-23,34;UBERON:0004121,5.75e-22,95;UBERON:0000924,5.75e-22,95;UBERON:0006601,5.75e-22,95;UBERON:0003528,1.79e-20,29;UBERON:0002791,1.79e-20,29;UBERON:0001893,1.79e-20,29;UBERON:0000025,2.60e-17,114;UBERON:0004111,3.51e-16,122;UBERON:0000956,5.65e-15,21;UBERON:0001869,5.65e-15,21;UBERON:0000203,5.65e-15,21;UBERON:0002619,4.49e-11,17;UBERON:0002021,6.62e-10,10;UBERON:0000411,6.62e-10,10;UBERON:0001950,6.62e-10,10;UBERON:0007100,1.18e-09,18;UBERON:0000948,1.18e-09,18;UBERON:0005498,1.18e-09,18;UBERON:0004140,1.18e-09,18;UBERON:0009881,1.18e-09,18;UBERON:0004141,1.18e-09,18;UBERON:0003084,1.18e-09,18;UBERON:0007005,1.18e-09,18;UBERON:0004139,1.18e-09,18;UBERON:0004291,1.18e-09,18;UBERON:0000483,9.73e-08,174;UBERON:0000119,1.98e-07,176
|phase1_expression=1.60148847104794,0,0.454999239389536,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.19060606211498,0.297872853602656,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0.384218305321555,12.8575119262512,14.5806413398226,13.6711224878398,2.57085885963423,5.74258206474195,3.30725157880376,5.271500906003,1.83843757322004,7.70811166995721,9.44886301830389,9.98442466165583,2.50583946687368,4.66586982372289,2.6045668527838,6.42120897703176,5.6276261003168,4.5839474333043,5.59794312399969,2.70506193518296,2.79599168737951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0.452167921657868,0,0,0,0.433798070759735,0,0.647067399789637,0.662524555381181,0.484875253135222,0,19.0307518057506,14.6612694769419,0,0,0,0,8.53806644607489,17.8425235099264,6.53402630986895,14.2535942557667,27.105838477015,9.3504620051802,12.1680947300818,0.407357455401265,0.746441823660558,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,1.50704817835715,1.63287597963187,3.20284300712124,2.06143794031403,4.13925393182425,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0.199034266818493,0,0,0,3.52113813310353,3.75241695969754,4.8616756594474,3.78791576936336,6.29645541591692,7.86762275725629,9.30135779001631,5.36546802799238,8.87416601990488,9.37991144506839,6.895033491322,8.431156192769,11.5497990066013,9.66020507280623,11.1391327571109,15.5614561937454,10.2904612379284,0.330418782983798,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.685491075658373,0,0.610953983535943,0.581857461502877,0.210407459670956,0.0632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,7.06422595946285,9.61135830056066,0,2.27223834483936,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0.790575555893047,8.67567554338879,0.141940085208269,0.534196811001766,0.325773918707152,0,0,4.12727081463468,4.83717691143602,2.45186603682668,2.95301892880773,0.922305443831782,1.80899805217755,2.54473610634254,2.13898427030833,0,1.05418608574999,0,2.38307724027652,1.08036656418786,1.81102157295856,0.857348140126369,1.77340233642274,2.85390108163313,2.30368628842969,5.78483403317739,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.596861720015682,0,0,6.48988557036784,0,0.412773735926445,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0.609958401380546,0.648032044930808,0.836353184057875,1.09181281873089,0.674321731924103,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0,0,7.34177395402186,7.36520378411483,11.4579102687879,10.6548973053086,14.3867329151835,6.7985450765073,12.8254275044043,5.85417564191487,7.70342095273148,10.3552062350364,0.62272408550506,0.399024873401031,0.682934423016537,1.21553358534147,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,0,0.943131706930381,1.31098110457835,0.960377286073039,1.14870937911227,1.90517476513229,1.0429589335037,1.15745532278223,2.47251540481984,0.883193520806384,0.342869252385415,1.24233064311536,1.90748951957857,1.45346416632329,1.03520318456864,1.52306294205018,1.28049581010941,0.789209134313529,0.407412341537585,1.12228454331548,1.06771516311757,1.57607171800902,2.04615521584845,1.23949472948773,0.964533054905707,1.49886346762768,1.63752125911786,0.859484216193193,1.72159498861959,1.10295709559758,2.55054619182464
|phase1_expression=1.60148847104794,0,0.454999239389536,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.19060606211498,0.297872853602656,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0.384218305321555,12.8575119262512,14.5806413398226,13.6711224878398,2.57085885963423,5.74258206474195,3.30725157880376,5.271500906003,1.83843757322004,7.70811166995721,9.44886301830389,9.98442466165583,2.50583946687368,4.66586982372289,2.6045668527838,6.42120897703176,5.6276261003168,4.5839474333043,5.59794312399969,2.70506193518296,2.79599168737951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0.452167921657868,0,0,0,0.433798070759735,0,0.647067399789637,0.662524555381181,0.484875253135222,0,19.0307518057506,14.6612694769419,0,0,0,0,8.53806644607489,17.8425235099264,6.53402630986895,14.2535942557667,27.105838477015,9.3504620051802,12.1680947300818,0.407357455401265,0.746441823660558,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,1.50704817835715,1.63287597963187,3.20284300712124,2.06143794031403,4.13925393182425,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0.199034266818493,0,0,0,3.52113813310353,3.75241695969754,4.8616756594474,3.78791576936336,6.29645541591692,7.86762275725629,9.30135779001631,5.36546802799238,8.87416601990488,9.37991144506839,6.895033491322,8.431156192769,11.5497990066013,9.66020507280623,11.1391327571109,15.5614561937454,10.2904612379284,0.330418782983798,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0,0,0.685491075658373,0,0.610953983535943,0.581857461502877,0.210407459670956,0.0632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,7.06422595946285,9.61135830056066,0,2.27223834483936,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0.790575555893047,8.67567554338879,0.141940085208269,0.534196811001766,0.325773918707152,0,0,4.12727081463468,4.83717691143602,2.45186603682668,2.95301892880773,0.922305443831782,1.80899805217755,2.54473610634254,2.13898427030833,0,1.05418608574999,0,2.38307724027652,1.08036656418786,1.81102157295856,0.857348140126369,1.77340233642274,2.85390108163313,2.30368628842969,5.78483403317739,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.596861720015682,0,0,6.48988557036784,0,0.412773735926445,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0.609958401380546,0.648032044930808,0.836353184057875,1.09181281873089,0.674321731924103,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0,0,7.34177395402186,7.36520378411483,11.4579102687879,10.6548973053086,14.3867329151835,6.7985450765073,12.8254275044043,5.85417564191487,7.70342095273148,10.3552062350364,0.62272408550506,0.399024873401031,0.682934423016537,1.21553358534147,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,0,0.943131706930381,1.31098110457835,0.960377286073039,1.14870937911227,1.90517476513229,1.0429589335037,1.15745532278223,2.47251540481984,0.883193520806384,0.342869252385415,1.24233064311536,1.90748951957857,1.45346416632329,1.03520318456864,1.52306294205018,1.28049581010941,0.789209134313529,0.407412341537585,1.12228454331548,1.06771516311757,1.57607171800902,2.04615521584845,1.23949472948773,0.964533054905707,1.49886346762768,1.63752125911786,0.859484216193193,1.72159498861959,1.10295709559758,2.55054619182464
|short_description=p1@Kcnj11
}}
}}

Latest revision as of 22:16, 26 September 2015

Short description:p1@Kcnj11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnj11_5end
Coexpression cluster:MCL_coexpression_mm9:3631
Association with transcript: 0bp_to_NM_001204411_5end
EntrezGene:Kcnj11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnj11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F227.11
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E38.87
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G18.43
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D211.14
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G110.29
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.19e-1623
neuroblast (sensu Vertebrata)2.19e-1623
neuron6.57e-1033
neuronal stem cell6.57e-1033
neuroblast6.57e-1033
electrically signaling cell6.57e-1033
electrically responsive cell2.98e-0739
electrically active cell2.98e-0739

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.19e-3492
regional part of nervous system1.23e-3354
neural tube1.39e-3152
neural rod1.39e-3152
future spinal cord1.39e-3152
neural keel1.39e-3152
neurectoderm2.21e-2864
neural plate2.21e-2864
presumptive neural plate2.21e-2864
brain2.29e-2847
future brain2.29e-2847
central nervous system1.62e-2773
regional part of brain1.85e-2746
nervous system3.03e-2675
anterior neural tube1.96e-2540
ecto-epithelium1.35e-2473
regional part of forebrain1.48e-2439
forebrain1.48e-2439
future forebrain1.48e-2439
pre-chordal neural plate2.43e-2449
gray matter1.67e-2334
ectoderm-derived structure5.75e-2295
ectoderm5.75e-2295
presumptive ectoderm5.75e-2295
brain grey matter1.79e-2029
regional part of telencephalon1.79e-2029
telencephalon1.79e-2029
tube2.60e-17114
anatomical conduit3.51e-16122
cerebral cortex5.65e-1521
cerebral hemisphere5.65e-1521
pallium5.65e-1521
regional part of cerebral cortex4.49e-1117
occipital lobe6.62e-1010
visual cortex6.62e-1010
neocortex6.62e-1010
primary circulatory organ1.18e-0918
heart1.18e-0918
primitive heart tube1.18e-0918
primary heart field1.18e-0918
anterior lateral plate mesoderm1.18e-0918
heart tube1.18e-0918
heart primordium1.18e-0918
cardiac mesoderm1.18e-0918
cardiogenic plate1.18e-0918
heart rudiment1.18e-0918
epithelium9.73e-08174
cell layer1.98e-07176
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